Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq44 84.2 3e-11 >seq44 Length=14409287 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 203910 CCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGT 203969 ||| || ||| ||||| | |||||| || ||||||| ||| || || || || | Sbjct 13241421 CCTGCTTCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATAT 13241362 Query 203970 GAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAA 204029 | ||||| | ||||||||||| || ||||||| | | || || ||||| |||| || Sbjct 13241361 GGATGTTTAATGACTGGCTTTGATCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAA 13241302 Query 204030 TGGTCTTCTGCGAAATCTCCCACACCGTCTT 204060 ||||| || || || |||||||| ||||| Sbjct 13241301 CAGTCTTTTGAGAGATTTCCCACACAGTCTT 13241271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794941661071040