Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq44 86.0 8e-12 >seq44 Length=14409287 Score = 86.0 bits (94), Expect = 8e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 ||||||| || ||||| || || ||||| ||||| || ||||| ||||||| | |||| Sbjct 13233233 AGTCTCAGACAGAGACAGGCACCCCATACATGCTCTATAAAGATTCCTGTAATCGGAAGA 13233292 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 | || || |||| ||||| ||||| | |||||| ||||||||||| | || | Sbjct 13233293 GCAACCAGCAGAACTTGGGAACCATCAAATGCAGCAACCTGTGTACAGAAATAGTAGAGT 13233352 Query 112414 TTACAGACAAAGATGAG 112430 ||| |||||||||| Sbjct 13233353 ATACCAGCAAAGATGAG 13233369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620575699628480