Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq34 91.5 1e-13 >seq34 Length=19385306 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325 ||| | ||| || ||||| || || ||||| || | | ||| | |||| |||| || Sbjct 7139850 ATGCAAGGTGGACTCTTTCTGGATGTTGTAGTCCGACAGGGTTTGGCCATCCTCCACCTG 7139791 Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385 ||| || |||||||||| | ||| || || | ||||||||||| |||| ||| || || Sbjct 7139790 CTTGCCAGCAAATATCAGTCTCTGCTGGTCAGATGGAATGCCTTCCTTATATTGGATCTT 7139731 Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445 || ||| | || | |||||| | || | |||||||||| || ||||| Sbjct 7139730 GGCCTTGACATTCTCGATGGTGTCACTGGGCTCGAACTCAAGAGTGATGGTCTTGCCCAA 7139671 Query 101446 TAAAGTTTTTACAAATATCTGCATG 101470 || || || ||||| ||||||||| Sbjct 7139670 CAAGGTCTTCACAAAGATCTGCATG 7139646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396174639949788