Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq35 105 1e-17 >seq35 Length=17774785 Score = 105 bits (116), Expect = 1e-17 Identities = 101/127 (80%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 25883 TGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCT 25942 |||||||||| ||||| || || ||| |||| ||| || |||||||| || || |||| Sbjct 13464797 TGGTAGCCTTCGCTGCCGTAGAAGGCGTCTTCTTCTCGGGGTCGTTTGCCGCTATATTCT 13464856 Query 25943 GGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGG 26001 |||| ||| ||| || |||||| || || ||||| || |||||||||||||||||| Sbjct 13464857 GGCTGAAGAAGAGAGGCCTCATGCCAGGACTC-ACTTTCTCAAACGAGCTCATCAGCAGG 13464915 Query 26002 GACGAGG 26008 ||||||| Sbjct 13464916 GACGAGG 13464922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928595358728960