Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 8e-12 >seq7 Length=28733031 Score = 86.0 bits (94), Expect = 8e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 |||||| || || | |||||||||||| ||||||||| |||| || | |||||||| || Sbjct 20253673 ACCATAGGGCGACCTTGGATAGAAAGGGGTGGTCTCTTTCTGGGGTATTTCTTGCACTTT 20253614 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 ||||| |||||||| || || || || |||| Sbjct 20253613 TCCATATAGTTCACTAGTCGAGGCCTGGTAGA 20253582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665315681478880