Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq34 84.2 2e-11 >seq34 Length=19385306 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 107650 ATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGG 107709 |||| |||||| | || || ||||||||||| || | ||| || || ||| |||||| Sbjct 7139741 ATAAGGAAGGCATTCCATCTGACCAGCAGAGACTGATATTTGCTGGCAAGCAGGTGGAGG 7139800 Query 107710 ACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 | | | |||| || ||||||||||||| || || ||||| || ||||| ||||| Sbjct 7139801 ATGGCCAAACCCTGTCGGACTACAACATCCAGAAAGAGTCCACCTTGCATCTGGTG 7139856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398772359594476