Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq11 111 2e-19 seq102 107 3e-18 seq236 105 9e-18 seq158 105 9e-18 seq309 104 3e-17 seq28 104 3e-17 seq12 104 3e-17 seq263 98.7 1e-15 seq178 95.1 2e-14 seq150 89.7 7e-13 >seq11 Length=24937227 Score = 111 bits (122), Expect = 2e-19 Identities = 73/81 (90%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 8653 CTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTC 8712 |||| ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| Sbjct 8081704 CTTACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTC 8081645 Query 8713 GATTCCCCGACGAGGAGCAGA 8733 |||||||||||| |||| ||| Sbjct 8081644 GATTCCCCGACGGGGAGAAGA 8081624 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 8081699 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 8081640 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 8081639 CCCGACGGGGAG 8081628 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 8081628 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 8081687 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 8081688 TACTAACGAGGA 8081699 >seq102 Length=8054149 Score = 107 bits (118), Expect = 3e-18 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 8651 GCCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGT 8710 ||| | |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||| Sbjct 3723661 GCCCTCTTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGT 3723720 Query 8711 TCGATTCCCCGACGAGGAG 8729 |||||||||||||| |||| Sbjct 3723721 TCGATTCCCCGACGGGGAG 3723739 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 3721201 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 3721260 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 3721261 CCCGACGGGGAG 3721272 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 3721201 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 3721260 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 3721261 CCCGACGGGGAGG 3721273 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 3723668 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 3723727 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 3723728 CCCGACGGGGAG 3723739 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 3721272 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 3721213 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 3721212 TACTAACGAGGAT 3721200 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 3723739 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 3723680 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 3723679 TACTAACGAGGA 3723668 >seq236 Length=1459171 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 1118800 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 1118741 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 1118740 CCCCGACGGGGAG 1118728 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1090454 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1090513 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1090514 CCCGACGGGGAG 1090525 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 1113380 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 1113321 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 1113320 CCCGACGGGGAG 1113309 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 1090454 TCCTCGTTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1090513 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 1090514 CCCGACGGGGAG 1090525 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1118799 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1118740 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 1118739 CCCGACGGGGAG 1118728 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||| Sbjct 1090527 AACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCAC 1090468 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 1090467 TATACTAACGAGGA 1090454 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| | |||||||||||||||| | |||| |||||||| ||||||| Sbjct 1113307 AACTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 1113366 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 1113367 TATACTAACGAGGA 1113380 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| ||| Sbjct 1113381 GTCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATT 1113322 Query 11788 CCCCGACGAGGAG 11800 |||||||| |||| Sbjct 1113321 CCCCGACGGGGAG 1113309 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 1118728 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1118787 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 1118788 TACTAACGAGGA 1118799 >seq158 Length=4249057 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 37766 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 37825 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 37826 CCCCGACGGGGAG 37838 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 37767 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 37826 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 37827 CCCGACGGGGAG 37838 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 37838 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 37779 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 37778 TACTAACGAGGA 37767 >seq309 Length=382471 Score = 104 bits (114), Expect = 3e-17 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 8645 GCCGATGCCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGAC 8704 |||| || | | ||||||||||||||||||| ||||| |||| ||||| | |||||||| Sbjct 379407 GCCGTTGTCGTCGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGAC 379348 Query 8705 CGGGGTTCGATTCCCCGACGAGGAG 8729 |||||||||||||||||||| |||| Sbjct 379347 CGGGGTTCGATTCCCCGACGGGGAG 379323 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 379395 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 379336 Query 11788 CCCCGACGAGGAG 11800 |||||||| |||| Sbjct 379335 CCCCGACGGGGAG 379323 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 379323 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 379382 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 379383 TACTAACGAGGA 379394 >seq28 Length=19452151 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 19419278 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 19419219 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 19419218 CCCGACGGGGAG 19419207 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 19419279 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 19419220 Query 11788 CCCCGACGAGGAG 11800 |||||||| |||| Sbjct 19419219 CCCCGACGGGGAG 19419207 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 19419207 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 19419266 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 19419267 TACTAACGAGGA 19419278 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/79 (86%), Gaps = 2/79 (3%) Strand=Plus/Plus Query 8653 CTTAT--TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGT 8710 ||||| ||||| ||||||||||||| || || |||| ||||| | ||||||||||||| Sbjct 19443920 CTTATCCTCCTCCTTAGTATAGTGGTGAGCATCCCCGCCTGTCACGTGGGAGACCGGGGT 19443979 Query 8711 TCGATTCCCCGACGAGGAG 8729 |||||||||||||| |||| Sbjct 19443980 TCGATTCCCCGACGGGGAG 19443998 Score = 86.0 bits (94), Expect = 8e-12 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||| ||||||||||||| || || |||| ||||| | |||||||||||||||||||| Sbjct 19443927 TCCTCCTTAGTATAGTGGTGAGCATCCCCGCCTGTCACGTGGGAGACCGGGGTTCGATTC 19443986 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 19443987 CCCGACGGGGAG 19443998 >seq12 Length=25144588 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 4603794 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 4603735 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 4603734 CCCGACGGGGAG 4603723 Score = 104 bits (114), Expect = 3e-17 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409 || |||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||| Sbjct 6912939 CATCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCA 6912998 Query 139410 CTATACTAACGAGGATTTTG 139429 |||||||||||||||||||| Sbjct 6912999 CTATACTAACGAGGATTTTG 6913018 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 6913013 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 6912954 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 6912953 CCCGACGGGGAG 6912942 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 6913013 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 6912954 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 6912953 CCCGACGGGGAG 6912942 Score = 98.7 bits (108), Expect = 1e-15 Identities = 68/76 (89%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 4603794 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 4603735 Query 11789 CCCGACGAGGAGGGAG 11804 ||||||| ||||| || Sbjct 4603734 CCCGACGGGGAGGTAG 4603719 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 4603723 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 4603782 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 4603783 TACTAACGAGGA 4603794 >seq263 Length=932407 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| | Sbjct 675264 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACTCGGGAGACCGGGGTTCGATGC 675205 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 675204 CCCGACGGGGAG 675193 Score = 96.9 bits (106), Expect = 5e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 |||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 675265 GTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACTCGGGAGACCGGGGTTCGATG 675206 Query 11788 CCCCGACGAGGAG 11800 |||||||| |||| Sbjct 675205 CCCCGACGGGGAG 675193 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 675193 CTCCCCGTCGGGGCATCGAACCCCGGTCTCCCGAGTGACAGGCGGGGATACTCACCACTA 675252 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 675253 TACTAACGAGGA 675264 >seq178 Length=3274853 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 139350 CAACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCA 139409 || |||| | ||||||| |||||||||||||||||| | |||| |||||||| | | || Sbjct 1743590 CATCTCCCCATCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCATCA 1743649 Query 139410 CTATACTAACGAGGATTTTG 139429 |||||||||||||||||||| Sbjct 1743650 CTATACTAACGAGGATTTTG 1743669 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||| | ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1743664 TCCTCGTTAGTATAGTGATGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1743605 Query 8718 CCCGACGAGGAG 8729 ||||| | |||| Sbjct 1743604 CCCGATGGGGAG 1743593 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||| | ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1743664 TCCTCGTTAGTATAGTGATGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 1743605 Query 11789 CCCGACGAGGAG 11800 ||||| | |||| Sbjct 1743604 CCCGATGGGGAG 1743593 >seq150 Length=4742123 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||| |||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 223746 TCCTTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 223687 Query 8718 CCCGACGAGGAG 8729 || || | |||| Sbjct 223686 CCTGATGGGGAG 223675 Score = 87.8 bits (96), Expect = 2e-12 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11729 GTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787 ||||| |||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 223747 GTCCTTGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 223688 Query 11788 CCCCGACGAGGAG 11800 ||| || | |||| Sbjct 223687 CCCTGATGGGGAG 223675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652669478528960