Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq44 87.8 2e-12 >seq44 Length=14409287 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 131030 GCCAGGTCGTTGCTAGCTTCCAAAGCTCCGTAATAAATGGTTTCGGCAATTTGTTTATTT 131089 || ||||| ||| |||||||||||||| |||||||| ||||| ||||| ||||| Sbjct 13234352 GCTAGGTCACAGCTGGCTTCCAAAGCTCCATAATAAATAGTTTCAAAGATTTGCTTATTC 13234293 Query 131090 AATTGTTTCGCTTGGTTGCTCTCGTAAGGAAATTTCATTAAAATAAAAGCGTCTGCGAGA 131149 ||| | |||| |||||| | ||| || |||| || || ||||| ||||| ||| Sbjct 13234292 AATAACTGAGCTTCTGGGCTCTCAAATGGATATCTCATCAAGATGAAAGCATCTGCTAGA 13234233 Query 131150 CCCTGTATCCCAA 131162 || |||| ||||| Sbjct 13234232 CCTTGTACCCCAA 13234220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424823136770208