Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2 279 2e-69 seq22 251 2e-61 seq19 232 2e-55 seq88 174 5e-38 seq31 123 8e-23 seq11 122 3e-22 seq215 113 1e-19 seq183 113 1e-19 seq29 113 1e-19 seq223 105 2e-17 seq123 104 7e-17 seq241 95.1 4e-14 seq185 95.1 4e-14 seq24 95.1 4e-14 seq1 95.1 4e-14 seq198 87.8 5e-12 seq114 84.2 7e-11 seq86 84.2 7e-11 >seq2 Length=60928133 Score = 279 bits (308), Expect = 2e-69 Identities = 705/1055 (67%), Gaps = 28/1055 (3%) Strand=Plus/Plus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 ||||||| | || || | ||| || || |||||| | |||| ||||||||| ||| Sbjct 56428429 ATGCTGTGGTCACAGTGCTAGCATACTTCAATGATCCTCAGCAACAGGCAACAAAATATG 56428488 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | ||||| | || ||||| || |||| || |||||||| |||||||| || Sbjct 56428489 CTGGAACTATTGCTGACTTCAATGTGCTTCGAATCATCAATGAACCAACTGCTGCTGCTG 56428548 Query 349728 TTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAG 349787 |||| ||||||| ||||| | | ||| |||| ||| ||||||||||||| | | Sbjct 56428549 TTGCTAATGGGCTAGATAAGAAGGGTGGAGTTGAAAGGAATGTTCTTATTTTTGACCTGG 56428608 Query 349788 GTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAG 349847 | |||| |||||||||||| ||| | | |||| || | |||| || |||| ||| Sbjct 56428609 GAGGTGATACTTTTGATGTGTCAATCTGCAGTTTTGAGGATGAAATTCTT-AAGTCAAAT 56428667 Query 349848 CAACTGCTGGTGATACACATCTTGG-TGGAGAAGATTTTGATAATCGTCTCGTTTCGCAT 349906 |||| ||||| | || || ||||| ||||||||| ||||||||| | | || || Sbjct 56428668 CAACAGCTGGAGGCACCCA-CTTGGTTGGAGAAGACTTTGATAATGGAATGGTCAACCA- 56428725 Query 349907 TTTGTTAAAG---AATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGC 349962 ||| | || | ||||||| |||| |||| || || | || ||| ||||| Sbjct 56428726 --TGTCATAGCTAAGTTTAAGC-AAAAGCACAAAAAGGACATCAGCGAGAATAAGAGAGC 56428782 Query 349963 AATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCA 350022 | | | || | | ||| |||| ||| || |||| || | || || | | ||| Sbjct 56428783 TGTCAGGCATCTGCGTATTGCCTGTGCACGGGCAAAGCACACCCTCTCCTCCAGCAGCCA 56428842 Query 350023 AACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACG 350082 || |||||| | ||||||||| ||| | | ||||||| | | || ||||| | Sbjct 56428843 GGCCAGTATTGAGACTGATTCTCTCTATGAGAGAACTGATTTCTGTAC-TC-ATTACCAG 56428900 Query 350083 TGCTCGGTTTGAAGAATTATGTATGGATCT-TTTTAGAGCAACAATGGATCCTGTGGAAA 350141 |||| | || ||||||||| | || || || ||| || | | | ||| |||| Sbjct 56428901 TGCTTGATTCGAAGAATTAAATGCTGACCTGTTCCCGAGGCACTCAGAACCATGTAGAAA 56428960 Query 350142 AAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTG 350201 | | | |||||| ||| | ||| |||||| |||| | | | || ||| Sbjct 56428961 AGGCCCTTCCAGATGCCAAACTAGACAAGTCTCAGATCCATGACATTGCCCTGGTGAGTG 56429020 Query 350202 GTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC 350261 | |||||| | || || || |||| || | || || || || ||||| ||||||| Sbjct 56429021 GGTCTACAAGAATCCCCAAGATTCAGAAGCTTCTGCAGGACTTCTTCAATGGGAAAGAAC 56429080 Query 350262 -CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCT 350320 | ||| | ||||| || |||||||||||||| |||||||| |||||||||||| | Sbjct 56429081 TGAACAAGAGC-ATTAACCCTGATGAAGCTGTTGCTTATGGTGCAGCTGTTCAGGCAGCC 56429139 Query 350321 ATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCA 350380 ||| |||||||| | ||| | ||| || | ||| | | || | ||| | |||| Sbjct 56429140 ATTCTATCTGGAGACAAGTCTGATAATGTTCAGGATTTTCTGCTGTTGGATATCACTCTT 56429199 Query 350381 CTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAA--ATA 350438 ||||| ||||| | |||||| |||||| || ||||| | ||||| | || | ||| Sbjct 56429200 CTTTCCCTTGGTATTGAAACTGCTGGTGCTGTCATGACCATCCTTAT--CAAGCACGATA 56429257 Query 350439 GTACTGTACCTACAAAAAAGTCCCAAACTT----TTTCTACATTTGCAGATAATCAGCCA 350494 | | ||||| || || | || || | | ||||| || || |||||||| Sbjct 56429258 CCATCATCCCTACTAAGCAGACACAGACATTCACTATCTACTTT----GACAATCAGCCT 56429313 Query 350495 GCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTT 350554 | || |||| || | ||||||| || | || || || ||||| || |||| Sbjct 56429314 GGTGTGGTCATTCTTGTTTATGAAGGTCAAAGGGCCATAACCAAGGATAACAACCTACTT 56429373 Query 350555 GGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTC 350614 ||| | ||| || | | | || ||| || | || |||||||||||||||||| Sbjct 56429374 GGAAAGTTTGAACTTACAGGCACCCCTCCAGAACCCTGTGGTGTTCCTCAGATTGAAGTC 56429433 Query 350615 TCTTTCGATATTGATTCAAATGGTATTTTAAATGT 350649 ||| || |||||| | ||||| || | ||||| Sbjct 56429434 ATTTTTGACATTGATGCCAATGGCATCCTCAATGT 56429468 >seq22 Length=22071668 Score = 251 bits (278), Expect = 2e-61 Identities = 572/850 (67%), Gaps = 18/850 (2%) Strand=Plus/Plus Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264 || || ||| | || || || ||||| ||||| | ||| | || ||| || || Sbjct 21657179 GGTATTGATCTTGGCACCACCTATTCCTGTGTGGGTGTCTTCCAGCATGGGAAGGTGGAG 21657238 Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324 ||| ||| ||||| || |||| | |||| || ||| || ||||| || || || || Sbjct 21657239 CTAACTGCCAATGACCAGGGTACCCGAACCACACCAAGTTATGTTGCTTTCACTGACACA 21657298 Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384 || || | ||||| ||| ||||||| ||||| | ||| || || | || || ||| Sbjct 21657299 GAACGATTAATTGGAGATGCTGCAAAGAATCAGGTTGCAATGAACCCCACCAACACAGTT 21657358 Query 349385 TTTG---ATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATC---TACACAATCT 349438 ||| |||| || | || | | || || ||| ||| | | | || ||| Sbjct 21657359 TTTTTTAATGCCAAATGGCTGCTCAGAAGTAGGTTT---GACGATGCCGTTGTTCAGTCT 21657415 Query 349439 GATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAG 349498 ||| | || || | || || || || || || | | | || | | | Sbjct 21657416 GATATGAAGCACTGGCCCTTCGTGGTGGTG---AATGATGCAGGCAGGCCCAAGGTCCAA 21657472 Query 349499 GTTGAATATAAAGGTGAACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTTTT 349557 || || |||||||| || ||| || ||| ||||| || || | || || |||||| | Sbjct 21657473 GTAGAGTATAAAGGAGAGGCAAA-CAGTTTCTACCCAGAGGAGGTGTCCTCTATGGTTCT 21657531 Query 349558 AGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTAT 349617 ||||||||||||||||| ||||| ||| | | | | || || ||||||| | Sbjct 21657532 GACCAAAATGAAGGAAATTGCAGAAGCCTATCTCAGAAAGATTGTTACCAATGCTGTAGT 21657591 Query 349618 TACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCAT 349677 ||||| || ||||| || |||||| | |||| | ||||||||||||||||| | || Sbjct 21657592 CACTGTGCCGGCCTACTTCAATGATTCTCAGCAATAGGCAACAAAAGATGCTGGAACTAT 21657651 Query 349678 TGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGG 349737 ||| || | ||||| || |||| || |||||||| |||||||| || ||||| ||||| Sbjct 21657652 TGCTGGCCTCAATGTGCTTCGAATTATCAATGAACCAACTGCTGCTGCTATTGCTTATGG 21657711 Query 349738 GCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTAC 349797 ||| ||||| | | || |||| ||| |||| | |||||| || || |||||||| Sbjct 21657712 GCTAGATAAGAAGTTTGGAGCTGAAAGGAATGTTCTCAGTTTTGACTT-GGAGGTGGTAC 21657770 Query 349798 TTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGG 349857 |||||||| ||| | || || |||| || |||| |||||||||||| |||| ||||| Sbjct 21657771 TTTTGATGGGTCAATCCTCACTATTGAGGATGGAA-ATTTGAAGTTAAATCAACAGCTGG 21657829 Query 349858 TGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGA 349917 || || || | |||||||||||||||||||| | | || ||||| || || Sbjct 21657830 AGACACCCACTTGGGTGGAGAAGATTTTGATAACAGAATGGTCAACCATTTCATTGCTGA 21657889 Query 349918 ATTTAAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAA 349976 |||||||| |||| || | | || | || || ||||| | | | ||| Sbjct 21657890 GTTTAAGCG-AAAGCACAAGAAGTACATCAGCGAGAACAAGAGAGCTGTCAGGCACCTGC 21657948 Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAA 350036 | ||||| |||||| || ||||| | | || || | ||||| || |||||| | Sbjct 21657949 GTACTGCCTGTGAATAGGCAAAGCGCATCCTCTCCTCCAGCACCCAGGCCAGTATTGAGA 21658008 Query 350037 TTGATTCTCT 350046 |||||||||| Sbjct 21658009 TTGATTCTCT 21658018 Score = 158 bits (174), Expect = 4e-33 Identities = 325/480 (68%), Gaps = 5/480 (1%) Strand=Plus/Plus Query 350174 CAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTA 350233 ||||| |||| | || | || ||||||||||| | || || || |||| || | Sbjct 21668431 CAGATCCATGACATTGTCCTGGTGGGTGGTTCTACCAGAATCCCCAAGATTCAGAAGCTT 21668490 Query 350234 CTATCTGAGTTTTTTAATGGCAAAGAACCTT-CTAGATCAATTAATCCAGATGAAGCTGT 350292 || || || || || | ||| ||| | ||| || |||| || ||||||||| | Sbjct 21668491 CTGCAGGACTTCTTCAACAGGAAATAACTGAACAAGAGCA-TTAAGCCTGATGAAGCTAT 21668549 Query 350293 TGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGA 350352 ||| |||||||| |||||||||| | | ||| ||||||| | ||| | || || | Sbjct 21668550 TGCTTATGGTGCAGCTGTTCAGGTAGCCATTCTATCTGGTGACAAGTCTGAGAATGTTCA 21668609 Query 350353 TGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGT 350412 ||| | | || | ||||| ||||| ||||| ||||| | |||||| |||||| ||| Sbjct 21668610 GGATTTGCTGCTGTTGGATGTCACTCCTCTTTCCCTTGGTATTGAAACTGCTGGTGGAGT 21668669 Query 350413 AATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTC 350472 ||||| | || || || |||| | | ||||| || || | || ||||| | Sbjct 21668670 CATGACAGGCCTCATCAAGAGCAATACCATCATTCCTACTAAGCAGACACAGACTTTCAC 21668729 Query 350473 TACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCG 350532 ||||| | | || |||||||| | || ||||| || | |||||||||| | || Sbjct 21668730 TACATATTCTGACAATCAGCCCGGTGTGCTCATTCAGGTCTATGAAGGTGAAAGCGCCAT 21668789 Query 350533 CACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAAT---TCCACCAATGCC 350589 || || ||||| || |||||| | ||| || | | || |||| || || Sbjct 21668790 GACCAAGGATAACAACCTGCTTGGAAAGTTTGAACTTATAGGCATCCCTCCAGCAGCACC 21668849 Query 350590 TAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAAATGT 350649 | || |||||||||||||||||| |||| || |||||| | ||||| || | ||||| Sbjct 21668850 CCGTGGTGTTCCTCAGATTGAAGTCACTTTTGACATTGATGCCAATGGCATCCTCAATGT 21668909 Score = 113 bits (124), Expect = 1e-19 Identities = 122/159 (77%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 183633 TTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTCA 183692 || || |||| ||||| |||| ||| ||||| | | | ||| ||||||||||||| Sbjct 21657907 TTGTGCTTTCGCTTAAACTCAGCAATGAAATGGTTGACCATTCTGTTATCAAAATCTTCT 21657848 Query 183693 CCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATTT 183752 ||||| || || || || ||||| || | ||||||||||||| |||| || |||||| | Sbjct 21657847 CCACCCAAGTGGGTGTCTCCAGCTGTTGATTTAACTTCAAAT-TTCCATCCTCAATAGTG 21657789 Query 183753 AAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 | ||||| ||||||| |||||||| |||| |||||| Sbjct 21657788 AGGATTGACCCATCAAAAGTACCACC-TCCAAGTCAAAA 21657751 >seq19 Length=22253760 Score = 232 bits (256), Expect = 2e-55 Identities = 385/549 (70%), Gaps = 8/549 (1%) Strand=Plus/Plus Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 |||| ||| |||| |||||||| || || ||||||||||||||||| ||| | || || Sbjct 3248539 GAAAGGAATGTTCTCATTTTTGACTTGGGAGGTGGTACTTTTGATGTGTCAATCCTCACT 3248598 Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879 |||| || |||||||||||||| ||| |||| ||||| || || || | ||||||||| Sbjct 3248599 ATTGAGGATGGAATTTTTGAAGTCAAATCAACAGCTGGAGACACCCACTTGGGTGGAGAA 3248658 Query 349880 GATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGC-TAAAAT 349938 ||||||||||| | | || ||||| || || |||||||| |||| || | Sbjct 3248659 GATTTTGATAACAGAATGGTCAACCATTTCATTGCTGAGTTTAAGCG-AAAGCACAAGAA 3248717 Query 349939 TGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAA 349998 || || | || || ||||| | | | ||| | ||||| ||||||| || || Sbjct 3248718 GGACATCAGCGAGAACAAGAGAGCTGTCAGGCACCTGCGTACTGCCTGTGAACAGGCAAA 3248777 Query 349999 GCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAA 350058 ||| || | || || | ||||| || |||||| ||||||||||| ||| || | Sbjct 3248778 GCGCACCCTCTCCTCCAGCACCCAGGCCAGTATTGAGATTGATTCTCTCTATGAGGGAAT 3248837 Query 350059 AGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATG--GATCTTTTT 350116 ||||||| | | || ||||| |||||||| || ||||||| || ||| || || || Sbjct 3248838 TGATTTCTATACCTCCATTACCCGTGCTCGATTCGAAGAAT--TGAATGCTGACCTGTTC 3248895 Query 350117 AGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAG 350176 ||| || |||| ||||| ||||| | | |||||| ||| | ||| ||| Sbjct 3248896 CGAGGCACTCTGGACCCTGTAGAAAAGGCCCTTCGAGATGCTAAACTAGACAAGTCACAG 3248955 Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 || |||| | || | || ||||||||||| | || || || |||| || | || Sbjct 3248956 ATCCATGACATTGTCCTGGTGGGTGGTTCTACCAGAATCCCCAAGATTCAGAAGCTTCTG 3249015 Query 350237 TCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGC 350295 || || || ||||| ||||||| | ||| | ||||| || |||||||||||||| Sbjct 3249016 CAGGACTTCTTCAATGGGAAAGAACTGAACAAGAGC-ATTAACCCTGATGAAGCTGTTGC 3249074 Query 350296 ATATGGTGC 350304 |||||||| Sbjct 3249075 TTATGGTGC 3249083 Score = 165 bits (182), Expect = 2e-35 Identities = 360/533 (68%), Gaps = 6/533 (1%) Strand=Plus/Minus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAA-TTCTTTGCCATTA 183320 |||||||||| |||||||||||||| |||||||| | | | | | |||||| ||||| Sbjct 3249085 CTGCACCATAAGCAACAGCTTCATCAGGGTTAAT-GCTCTTGTTCAGTTCTTTCCCATTG 3249027 Query 183321 AAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACT 183380 || || || || | | ||||| || || ||||| || |||||||| || | || Sbjct 3249026 AAGAAGTCCTGCAGAAGCTTCTGAATCTTGGGGATTCTGGTAGAACCACCCACCAGGACA 3248967 Query 183381 ACTTCATCGATATT--ACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGT 183438 | |||| ||| | |||| | ||| ||| | |||| | | ||||| ||||||| Sbjct 3248966 ATGTCATGGATCTGTGACTTGT-CTAGTTTA-GCATCTCGAAGGGCCTTTTCTACAGGGT 3248909 Query 183439 CCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATG 183498 ||| ||| || || | || | || ||||| |||| || | || | || | Sbjct 3248908 CCAGAGTGCCTCGGAACAGGTCAGCATTCAATTCTTCGAATCGAGCACGGGTAATGGAGG 3248849 Query 183499 aaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATG 183558 | | || ||||| || | ||| | |||||||| ||||| | || || || | Sbjct 3248848 TATAGAAATCAATTCCCTCATAGAGAGAATCAATCTCAATACTGGCCTGGGTGCTGGAGG 3248789 Query 183559 ATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTAT 183618 | | || | || || ||||||| || || | || | | | | ||| || | Sbjct 3248788 AGAGGGTGCGCTTTGCCTGTTCACAGGCAGTACGCAGGTGCCTGACAGCTCTCTTGTTCT 3248729 Query 183619 CTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTG 183678 | | || || | || || |||| ||||| |||| ||| ||||| | | | ||| Sbjct 3248728 CGCTGATGTCCTTCTTGTGCTTTCGCTTAAACTCAGCAATGAAATGGTTGACCATTCTGT 3248669 Query 183679 TATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTC 183738 ||||||||||||| ||||| || || || || ||||| || | ||| |||||||| |||| Sbjct 3248668 TATCAAAATCTTCTCCACCCAAGTGGGTGTCTCCAGCTGTTGATTTGACTTCAAAAATTC 3248609 Query 183739 CGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAAA 183791 | || |||||| | | ||||| |||||||| |||||||| ||||| |||||| Sbjct 3248608 CATCCTCAATAGTGAGGATTGACACATCAAAAGTACCACCTCCCAAGTCAAAA 3248556 Score = 107 bits (118), Expect = 6e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 ||||||| | || || || ||||| || |||||| | ||||| ||||||||||||| Sbjct 3248303 ATGCTGTGGTCACCGTGCCGGCCTACTTCAATGATTCTCAGCGACAGGCAACAAAAGATG 3248362 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | ||||| || | ||||| || |||| || |||||||| |||||||| || | Sbjct 3248363 CTGGGACTATTGCTGGCCTCAATGTGCTTCGAATTATCAATGAACCAACTGCTGCTGCTA 3248422 Query 349728 TTGCATATGGGCTTGATAA 349746 |||| |||||||| || || Sbjct 3248423 TTGCTTATGGGCTAGACAA 3248441 >seq88 Length=9234670 Score = 174 bits (192), Expect = 5e-38 Identities = 177/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 || ||||||||| | ||| | ||||| ||||| || ||||| ||||| || || || || Sbjct 4564052 CACACCACCACGAAGTCTCAACACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTC 4564111 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || || || |||||||| || | || ||||||||||| || | ||||| ||||| Sbjct 4564112 AGACAACGTGCGGCCATCTTCCAGCTTCTTACCAGCAAAGATCAGCCTCTGCTGGTCAGG 4564171 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||||||| |||||||| || || || |||||||| || || | || || ||||| Sbjct 4564172 AGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTC 4564231 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||| || || || | || || || || || || || || ||||||||||| Sbjct 4564232 AACCTCGAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACGAAAATCTGCAT 4564282 >seq31 Length=19353835 Score = 123 bits (136), Expect = 8e-23 Identities = 103/126 (82%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 |||||| |||| || ||||| |||||||| | || ||||| || || | |||||||| Sbjct 14184603 ACAAGACGAAGGGTGGACTCCTTTTGAATGCTGTAGTCAGACAAAGTATGGCCATCTTCT 14184662 Query 140589 AGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGA 140648 ||||| || ||||||||||| |||| ||||||||||||| ||||| ||| |||||||| Sbjct 14184663 AGTTGCTTACCAGCAAAGATCAGACTCTGCTGATCAGGAGAAATTCTTTCCTTATCCTGG 14184722 Query 140649 ATTTTA 140654 |||||| Sbjct 14184723 ATTTTA 14184728 >seq11 Length=24937227 Score = 122 bits (134), Expect = 3e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || ||||||||||| || || || |||||||| | || || |||||| Sbjct 14395180 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 14395239 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || || |||||||| || || ||||| || || || || || || |||||| Sbjct 14395240 TCCAGCTGCTTGCCTGCAAAGATGAGTCGCTGCTGGTCGGGGGGGATGCCCTCCTTATCC 14395299 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || || || | ||| || || || || || || | ||| Sbjct 14395300 TGGATCTTGGCCTTGACGTTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 14395359 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || || || || || |||||||| Sbjct 14395360 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 14395391 >seq215 Length=1997539 Score = 113 bits (124), Expect = 1e-19 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 140601 GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTT 140660 |||||||| || | ||||| ||||||||||||||||| |||||||| || || || ||| Sbjct 1382440 GCAAAGATCAGCCTCTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTT 1382499 Query 140661 ACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTT 140720 ||||| || || | || || |||||||| || ||||| | || || || || || || Sbjct 1382500 ACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGTGTGATGGTTTTCCCCGTAAGGGTC 1382559 Query 140721 TTTACAAAAATCTGCAT 140737 || || ||||||||||| Sbjct 1382560 TTCACGAAAATCTGCAT 1382576 >seq183 Length=3225409 Score = 113 bits (124), Expect = 1e-19 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 54741 AACGGTTAAATAAGGAG-TTAGCTGATATAAATAGTAATCCACCAACAAATTGTTCAGCT 54799 ||||| | ||||||||| |||| |||| | | || | || ||| || | ||||| || Sbjct 617778 AACGGATTAATAAGGAGCTTAG-TGATTTGATCGGTGACCCTCCAGCACAATGTTCTGCA 617836 Query 54800 GGAGTAATAGATGATGATATTTTTCATTGGCAAGCAACAATTATGGGACCAGAAGATACC 54859 || | | | ||||| | |||||||||||||| ||||||||| |||| | || | | Sbjct 617837 GGTCCAGTTGGAGATGACAAGTTTCATTGGCAAGCCACAATTATGAGACCTAATGACAGC 617896 Query 54860 CCGTATCAAGGTGGTATATTTGAGTTAAGAATTGATTTTCCACAAGATTATCCATTTAAA 54919 || |||||||||||| |||| || | ||| ||||||| ||| || || || ||| Sbjct 617897 CCATATCAAGGTGGTGTATTCTTTTTGATTATTCATTTTCCTACAGACTACCCCTTCAAA 617956 Query 54920 CCTCCAAATGTAGTTTTTACTACAAAGATTTATCAT 54955 || || || || | ||||| |||| ||||||||| Sbjct 617957 CCACCTAAGGTTGCATTTACAACAAGAATTTATCAT 617992 >seq29 Length=19544038 Score = 113 bits (124), Expect = 1e-19 Identities = 131/176 (74%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 |||||||||| || | ||||| |||| || ||||| ||||| || | || ||| | Sbjct 9852156 ACCACCACGT---CTCAACACAAGGGGAAGGGTGGACTCCTTTTGGATGCTGTAGTCAAA 9852212 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || || |||||||| || || | ||||||||||| || | ||||| |||||||| Sbjct 9852213 ----GTACGGCCATCTTCCAGCTGCTGACCAGCAAAGATCAGCCTCTGCTGCTCAGGAGG 9852268 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 ||| ||||| |||||||| || || || |||||||| || || | || ||||||| Sbjct 9852269 AATCCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGATGGTT 9852324 >seq223 Length=1816191 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 349700 ATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAA 349759 ||| | || ||||| |||||||| || ||||| |||| ||| ||||| | | || Sbjct 1410011 ATGCTCAAAGAACCAACTGCTGCTGCTATTGCTTATGCGCTAGATAAGAAGGTTGGAGGG 1409952 Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 |||| ||| | || ||||||| ||| | ||| |||||||| |||| ||| | | || Sbjct 1409951 GAAAGGAATGTGCTGATTTTTGGCTTATGAGGTAGTACTTTTAATGTGTCAATCCCCACT 1409892 Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879 |||| | |||||||| || | ||| ||| ||||| || | ||| ||||||||||| Sbjct 1409891 ATTGAGGGTAGAATTTTTTAAATCAAATCAAGAGCTGGAGACCCCCATTTTGGTGGAGAA 1409832 Query 349880 GATTTTGATAA 349890 || ||||| || Sbjct 1409831 GACTTTGAAAA 1409821 >seq123 Length=6821335 Score = 104 bits (114), Expect = 7e-17 Identities = 113/149 (76%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 350170 AAATCAGA--TTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAA 350227 |||||||| |||||||| | ||| | || ||||| ||||| || ||||| || |||| Sbjct 1380429 AAATCAGACATTGATGAAATTGTTCTTGTCGGTGGGTCTACTCGGATTCCCAAGATTCAG 1380488 Query 350228 CAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAA 350287 ||| | | ||||| || |||||||| || || ||| | || || |||||||| Sbjct 1380489 CAGCTGGTGAAAGAGTTCTTCAATGGCAAGGAGCCATCTCGTGGCATAAACCCAGATGAG 1380548 Query 350288 GCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 ||||| ||||||||||||||||| ||||| Sbjct 1380549 GCTGTAGCATATGGTGCTGCTGTCCAGGC 1380577 Score = 98.7 bits (108), Expect = 3e-15 Identities = 107/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 183250 CAGCTTGAACAGCTGCACCATATGCAACAGCTTCATCTGGGTTAATTGAACGAGATAATT 183309 |||| || ||||| ||||||||||| ||||| ||||||||||| || ||||||| | Sbjct 1380579 CAGCCTGGACAGCAGCACCATATGCTACAGCCTCATCTGGGTTTATGCCACGAGATGGCT 1380520 Query 183310 CTTTGCCATTAAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCAC 183369 | |||||||| || || ||| | || || ||||| || ||||| | ||| || |||| Sbjct 1380519 CCTTGCCATTGAAGAACTCTTTCACCAGCTGCTGAATCTTGGGAATCCGAGTAGACCCAC 1380460 Query 183370 CGACTAATACTACTTCATCGAT 183391 |||| | || | |||||| || Sbjct 1380459 CGACAAGAACAATTTCATCAAT 1380438 >seq241 Length=1258670 Score = 95.1 bits (104), Expect = 4e-14 Identities = 119/162 (73%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | || | |||| ||||| || | ||| | ||| | || || ||||| Sbjct 25793 ACCACCACGAAGACTAAACGCAAGGTGAAG-GTGGGCTCCTCTTGGCTGTTGTAGTCAGA 25851 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 || |||||| |||| || || ||||||||||||| || | ||||| |||||||| Sbjct 25852 CAACTCACGCCCAACTTCCAGCTGCTTTCCAGCAAAGACCAGCCTCTGCTGGTCAGGAGG 25911 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAAT 140671 ||||||| | ||| |||| || || || |||||| | || || Sbjct 25912 AATTCCTGCCTTAGCCTGGATCTTGGCCTTTACACTTTCTAT 25953 >seq185 Length=3027426 Score = 95.1 bits (104), Expect = 4e-14 Identities = 144/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 54741 AACGGTTAAATAAGGAG-TTAGCTGATATAAATAGTAATCCACCAACAAATTGTTCAGCT 54799 ||||| | |||||||| |||| |||| | || | || ||| || | ||||| || Sbjct 2414814 AACGGATTAATAAGGAACTTAG-TGATTTGGCCTGTTACCCTCCAGCACAATGTTCTGCA 2414756 Query 54800 GGAGTAATAGATGATGATATTTTTCATTGGCAAGCAACAATTATGGGACCAGAAGATACC 54859 || | | || ||||| || |||||||||||||| |||||||| ||||| | || | | Sbjct 2414755 GGTCCATTGGA-GATGACATGTTTCATTGGCAAGCCACAATTATAGGACCTAATGACAGC 2414697 Query 54860 CCGTATCAAGGTGGTATATTTGAGTTAAGAATTGATTTTCCACAAGATTATCCATTTAAA 54919 || |||||||||||| |||| || | |||| ||||||| ||| || || || ||| Sbjct 2414696 CCATATCAAGGTGGTGTATTCTTTTTGACAATTCATTTTCCTACAGACTA-CCCTTCAAA 2414638 Query 54920 CCTCCAAATGTAGTTTTTAC 54939 || || || || | ||||| Sbjct 2414637 CCACCTAAGGTTGCATTTAC 2414618 >seq24 Length=20494602 Score = 95.1 bits (104), Expect = 4e-14 Identities = 155/223 (70%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 140515 CACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATG 140574 |||| | ||| | ||| ||| ||| || ||||| |||||||| || || ||||| || | Sbjct 852575 CACGAAGTCTCAACACAGGATAAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAG 852516 Query 140575 TTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTC 140634 | | |||||||| | || | | || ||| || | ||||||||||||||||||| Sbjct 852515 TGTGGCCATCTTCCAACTGATCACTAG---AGAGCAGCCTCTGCTGATCAGGAGGAATTC 852459 Query 140635 CTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAA 140694 |||| ||||||| || || || |||| ||| || | | | || |||||||| | | Sbjct 852458 CTTCCTTATCCTATATCTTGGCCTTTATATTTTCTAGAGTGCCTGAGGGTTCAACCTGGA 852399 Query 140695 GTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 | | | ||||| | | || |||| ||||||||||| Sbjct 852398 GCATGATGGTCTTCTCTGCAAGGGTTTCCTTGAAAATCTGCAT 852356 >seq1 Length=79790405 Score = 95.1 bits (104), Expect = 4e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 140538 AGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTT 140597 || ||||||||||| | | | || |||||||| | | || |||||||| || || || Sbjct 51916188 AGGGTAGACTCTTTCTTAGTGTTGTAATCAGAAAGAATGCGACCATCTTCCAGCTGCTTG 51916247 Query 140598 CCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCT 140657 || |||||||| | | ||||| ||||| || || | ||||||||||| || || || Sbjct 51916248 CCTGCAAAGATGAACCTCTGCTGGTCAGGGGGTATGTCCTCTTTATCCTGGATCTTGGCC 51916307 Query 140658 TTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTT 140707 || ||||| ||||| | ||| || || || || || || | |||||| Sbjct 51916308 TTCACATTCTCAATGGTGTCACTGGGCTCTACCTCTAGGGTGATTGTCTT 51916357 >seq198 Length=2808281 Score = 87.8 bits (96), Expect = 5e-12 Identities = 119/164 (73%), Gaps = 8/164 (5%) Strand=Plus/Plus Query 140529 ACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCA 140588 ||||||||||| |||||||| ||| ||| || || ||||| |||| | |||||||| Sbjct 1655780 ACAAGATGAAGGGTAGACTC-CTTTAAATGTTGTAGTCAGACAATGCATGGCCATCTTCC 1655838 Query 140589 AGTTGTTTTCCA-GCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTG 140647 || || || ||| | || || |||||||| ||| |||||||||| | || ||| Sbjct 1655839 AGCTGCTTACCAGGTCAACAT------TTGCTGATTGGGAAGAATTCCTTCCTAATTCTG 1655892 Query 140648 AATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTT 140691 || || | |||| ||| || || | ||| || ||||||| || Sbjct 1655893 GATCTTGGTCTTTATATTGTCTATAGTATCTGAGGGTTCAAATT 1655936 >seq114 Length=8237167 Score = 84.2 bits (92), Expect = 7e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 349760 GaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACA 349819 |||| ||| | || | |||| | || || |||||| || ||||||| ||| | || || Sbjct 5625922 GAAAGGAATGTGCTGAGTTTTTACTTGGGAGGTGGTGCTGTTGATGTGTCAGTCCTCACC 5625863 Query 349820 CTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAA 349879 |||| || |||| || |||||| ||| |||| ||||| || || || | ||||||||| Sbjct 5625862 ATTGAGGATGGAACTTCTGAAGTAAAATCAACAGCTGGAGACACCCACTTGGGTGGAGAA 5625803 Query 349880 GATTTTGATAA 349890 || | ||||| Sbjct 5625802 GAATCCGATAA 5625792 >seq86 Length=10151807 Score = 84.2 bits (92), Expect = 7e-11 Identities = 148/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || |||||| || || | |||||||| | || | ||||| Sbjct 3693141 AGGACCAGGTGCAGGGTGAACTCTTCCTGGATGCTGTAATCAGAAAGAGTGCAGTCATCT 3693200 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC-AGGA--GGAATTCCTTCTTTA 140642 || ||||| || || |||||||| || |||||| | ||| || || || |||||| Sbjct 3693201 TCCAGTTGCTTGCCGGCAAAGATGAG---TTGCTGTTGGAGGGCGGGGATGCCCTCTTTA 3693257 Query 140643 TCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACT 140702 ||||| || || | | ||||| | ||| | ||| ||||| || || || || | Sbjct 3693258 TCCTGGATCTTGACCCTGACATTCTGAATGGTGTCACTGGGTTCCACCTCTAGGGTGATG 3693317 Query 140703 GTCTTTCCGGTTAGTGTTTTTACAAAAATCTGC 140735 ||||| ||||| || ||||||| ||||| ||| Sbjct 3693318 GTCTTGCCGGTCAGGGTTTTTATTAAAATTTGC 3693350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514837305391652