Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mesocricetus_20auratus_20[refseq_20GCF_5F000349665.1_202013-03-29] 21,484 sequences; 2,504,925,039 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq35 91.5 2e-13 >seq35 Length=17774785 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 59989 TAGCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGC 60048 |||| || || ||| ||||| |||||||||| || ||||| ||||| ||||||| Sbjct 13464800 TAGCCTTCGCTGCCGTAGAAGGCGTCTTCTTCTCGGGGTCGTTTGCCGCTATATTCTGGC 13464859 Query 60049 TCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACG 60108 | || ||| | ||||||||||| || || | |||||| |||||||| || | |||||| Sbjct 13464860 TGAAGAAGAGAGGCCTCATGCCAGGACTCACTTTCTCAAACGAGCTCATCAGCAGGGACG 13464919 Query 60109 AGG 60111 ||| Sbjct 13464920 AGG 13464922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548377493664960