Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20agrestis_20[genbank_20GCA_5F001305995.1_202015-10-02] 230,202 sequences; 3,124,140,565 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq2307 87.8 2e-12 >seq2307 Length=4779897 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 130048 GATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAAT 130107 |||||||||||||||||| || || |||||||| || | |||||||| |||||| || Sbjct 580522 GATGAGTTCATTCGAGAAAGTGAGTCCGGGCATGAGGCCTCTCTTCTTCAGCCAGAAGAT 580463 Query 130108 CGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 ||| |||||| ||||||||||| | || ||||| Sbjct 580462 AGCAGCAAATGACCCAGAGAAGAAAACGCCTTCCAC 580427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 616655637251120