Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20ochrogaster_20[refseq_20GCF_5F000317375.1_202012-12-07] 6,335 sequences; 2,287,340,943 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq4 327 1e-84 seq26 257 2e-63 seq87 187 3e-42 seq9 152 5e-32 seq7 150 2e-31 seq2 138 1e-27 seq42 127 2e-24 seq33 109 6e-19 seq38 100 3e-16 seq40 93.3 4e-14 seq17 91.5 2e-13 seq61 89.7 5e-13 >seq4 Length=96435083 Score = 327 bits (362), Expect = 1e-84 Identities = 559/803 (70%), Gaps = 11/803 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| || ||| | || || ||||||| |||||| | || ||||| |||||| || Sbjct 65464816 GAGCC-CTTCTGAGAGAAAATCCCCGCCACTTCGTGGTCTTTCCCATCGAATACCATGAT 65464758 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || |||||||| || |||||||| | |||||||| ||||| Sbjct 65464757 ATCTGGCAGATGTACAAGAAAGCCGAGGCTTCCTTCTGGACGGCTGAGGAGGTCGACCTC 65464698 Query 116696 TCCAAGGACACGAGCGACTGGGA-GCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 |||||||| | ||||||| ||||| ||| | ||||| | ||||| || || Sbjct 65464697 TCCAAGGATATTCAACACTGGGAAGCGCTGAAACC-CGACGAGAGACATTTTATATCTCA 65464639 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 ||| ||||| || || || || || || ||||| ||||| || || ||||| ||||| || Sbjct 65464638 CGTCCTGGCTTTCTTTGCTGCGAGTGATGGCATAGTCAATGAAAACCTGGTGGAGCGCTT 65464579 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGA 116874 | || || || ||||| | ||||| || || ||||| ||||| || || |||||||| Sbjct 65464578 CAGCCAAGAAGTTCAGGTTACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGA 65464519 Query 116875 GAACGTG-CACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGG 116933 ||| | || || |||||||| ||||||||| || ||| | ||| | | Sbjct 65464518 AAACATAACATTCTGAAATGTACAGTCTCCTCATCGATACTTACATTAAAGATTCCAAAG 65464459 Query 116934 AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 ||| | | | || || || || ||||| ||||| || || ||| |||||||||| | Sbjct 65464458 AGAGGGAATATCTCTTCAATGCTATTGAGACAATGCCTTGTGTGAAAAAGAAGGCCGACT 65464399 Query 116994 GGGCGCTGCGCTGGATCGCCGG-CAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTC 117052 |||| ||||| ||||| | || || ||| || ||| || || || | |||||||| Sbjct 65464398 GGGCCCTGCGTTGGATTGGGGGACAAAGAAGCTACCTATGGAGAACGAGTTGTGGCCTTT 65464339 Query 117053 GCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAA 117112 || || || || || || |||| || ||| || | | ||||| |||||||||||| Sbjct 65464338 GCTGCTGTGGAAGGGATCCTCTTCTCTGGCTCCTTTGTGTCAATATTCTGGCTCAAGAAA 65464279 Query 117113 CGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTG 117172 || || || ||||| ||||| || || ||||||||| || ||| || |||||| | Sbjct 65464278 CGGGGACTGATGCCTGGCCTTACGTTTTCCAACGAGCTTATTAGCAGAGATGAGGGTTTA 65464219 Query 117173 CATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGC-- 117230 || || ||||||||| || |||||| ||| |||| || ||| ||| || Sbjct 65464218 CACTGTTGCTTTGCCTGCCTGATGTTCAGGCACCTGGTACACAAGCCG---CCGGAGCAA 65464162 Query 117231 -GCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCG 117289 | || || ||| | | | |||| || | |||||| || ||||| || || Sbjct 65464161 AGAGTACAAGAAATCATTATCAACGCAGTGAGGCTAGAGCAGGAGTTTCTCACGGAGGCC 65464102 Query 117290 CTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTC 117349 ||||| ||| || | || | || |||| |||| ||| |||||||| ||||| Sbjct 65464101 CTGCCTGTGAAGCTCATCGGGATGAACTGCGCCCTGATGAAGCAGTACATCGAATTCGTG 65464042 Query 117350 GCCGACAGGCTGCTGCTCGAGCT 117372 || |||||||| |||| ||||| Sbjct 65464041 GCGGACAGGCTTATGCTGGAGCT 65464019 >seq26 Length=66536344 Score = 257 bits (284), Expect = 2e-63 Identities = 444/638 (70%), Gaps = 9/638 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| | ||| | || || | || || ||||| | || ||||| |||||| || Sbjct 31520027 GAGCCCTTACTGAGAGAAAATCGCCACCACTTCGTTGTCTTTCCCATTGAATACCATGAT 31519968 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || |||||||| | |||||||| | || ||||||||||| Sbjct 31519967 ATCTGGCAGATGTACAAGAAAGCCGAGGCCTTCTTCTGGACAGCTGACGAGGTGGACCTC 31519908 Query 116696 TCCAAGGACACGAGCGACT-GGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 |||||||| | ||| || ||||| |||| ||||| | ||||| || || Sbjct 31519907 TCCAAGGATATTCAACACTAGGAAGCGC-TGAAACCTGACGAGAGACATTTTATATCTCA 31519849 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TT 116813 ||| ||||| || || || ||||| || ||||| ||||| || || ||||| ||||| || Sbjct 31519848 CGTCCTGGCTTTCTTTGCAGCCAGTGATGGCATAGTCAATGAAAACCTGGTGGAGCGCTT 31519789 Query 116814 TCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGG 116873 | || || || || ||||| | ||||| || || ||||| ||||| || || ||||||| Sbjct 31519788 TAGC-CAAGAAGTTCAGGTTACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGG 31519730 Query 116874 AGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGG 116933 | ||| || || |||||||| |||||| ||||| | | ||| | | Sbjct 31519729 AAAACAAACATTCTGAAATGTACAGTCTCCTCATTGACACATTAAAG----ATTCCAAAG 31519674 Query 116934 AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 ||| | | | || || || || ||||| ||||| || || ||| || |||| || | Sbjct 31519673 AGAGGGAATATCTCTTCAATGCTATTGAGACAATGCCTTGTGTGAAAAAGTAGGCTGACT 31519614 Query 116994 GGGCGCTGCGCTGGA-TCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTC 117052 |||| ||||| |||| | | | || | || | ||| || || | | |||||||| Sbjct 31519613 GGGCCCTGCGTTGGATTTGGAGACAAAAAGACTACCTATGGAGAAAGAGTTGTGGCCTTT 31519554 Query 117053 GCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAA 117112 || || || || | | ||||||| || ||| ||| || | ||||| |||||||||||| Sbjct 31519553 GCTGCTGTAGAAGACATCTTCTTCTCTGGCTCTTTTGCGTCAATATTCTGGCTCAAGAAA 31519494 Query 117113 CGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTG 117172 | || || ||||| ||||| || || ||| ||||| || ||| || ||| || | Sbjct 31519493 CAGGGACTGATGCCTGGCCTTACATTTTCCAAAGAGCTTATTAGCAGAGATGAGCGTTTA 31519434 Query 117173 CATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGT 117210 || || | ||||||||| || |||||| ||| |||| Sbjct 31519433 CACTGTGGCTTTGCCTGCCTGATGTTCAGGCACCTGGT 31519396 >seq87 Length=2570995 Score = 187 bits (206), Expect = 3e-42 Identities = 364/531 (69%), Gaps = 5/531 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| | ||| | || || |||||||| ||| | | || || || | |||| || Sbjct 1819727 GAGCCCTTACTGAGAGAAAATCCCCGCCGCTTCCTTGTCTTTCCTATCGAGTACCATGAT 1819668 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| | |||||| || |||||||| || ||||||| | |||||||||||||| Sbjct 1819667 ATCTGGCAGA-GTACAAGAAAGCCGAGGCCTCCTTCTGGATGGCTGAGGAGGTGGACCTC 1819609 Query 116696 TCCAAGGACACGAGCGACTGGGA-GCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 |||||||| | ||||||| ||||| ||| | ||||| | ||||| || || Sbjct 1819608 TCCAAGGATATTCAACACTGGGAAGCGCTGAAACC-CGACGAGAGACATTTTATATCCCA 1819550 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-TT 116813 ||| ||||| || || | | || || || | ||||| || |||||||||||| | || Sbjct 1819549 CGTCCTGGCTTTCTTTGTGACGAGTGATGGATTAGTCAATGAAAATCTGGTCGAGTGCTT 1819490 Query 116814 TCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGG 116873 | || || || || ||||| | ||||| | || ||||| ||||| || || ||||||| Sbjct 1819489 TAGC-CAAGAAGTTCAGGTTACAGAGGCCAGCTGTTTCTATGGCTTCCAAATTGCCATGG 1819431 Query 116874 AGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGG 116933 | ||| | || || |||||||| |||||| | ||| ||| | ||| | | Sbjct 1819430 AAAACATACATTCTGAAATGTACAGTCTCCTCATTGTCACCTACATTAAAGATTCCAAAG 1819371 Query 116934 AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 ||| | | | | || || || ||||| ||||| || || ||| |||||||||| | Sbjct 1819370 AGAGGGAATATCTTGTCAATGCTATTGAGACAATGCCTTGTGTGAAAAAGAAGGCCGACT 1819311 Query 116994 GGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 || | ||| ||||| | | || ||| || ||| || || || | ||| |||| | Sbjct 1819310 GGACCGTGCATTGGATTGGGGACAAAGATGCTACCTATGGAGAACGAGTTGTGACCTTTG 1819251 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGC 117104 | || || || || ||||||| || ||| ||| | | ||||| |||| Sbjct 1819250 CTGCTGTAGAAGGGATCTTCTTCTCTGGCTCTTTTGTGTCAATATTCTGGC 1819200 >seq9 Length=86001432 Score = 152 bits (168), Expect = 5e-32 Identities = 293/429 (68%), Gaps = 10/429 (2%) Strand=Plus/Minus Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTC-AAAGAGAAGGCCGAGTGGGCGCTGCGCTG 117006 || || || || ||||| ||||| || || ||| ||||||| || ||||| ||||| || Sbjct 36370286 TTCAATGCTATTGAGACAATGCCTTGTGTGGAAAAAGAAGGCTGACTGGGCCCTGCGTTG 36370227 Query 117007 GATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGG 117066 ||| | | || ||| || ||| || || || | |||||||| || || | || || Sbjct 36370226 GATTGGGGACAAAGAAGCTACCTATGGAGAACGAGTTGTGGCCTTTGCTGCTATGGAAGG 36370167 Query 117067 CGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCC 117126 |||||| | ||| ||| || | ||||| ||||||| ||||| || || ||||| Sbjct 36370166 GATCTTCTCT---GGCTCTTTTGCGTCAATATTCTGGCTCAGGAAACTGGGACTGATGCC 36370110 Query 117127 CGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGC 117186 ||||| || || ||||||||| || ||| || |||||| | || || |||||||| Sbjct 36370109 TGGCCTTACGTTTTCCAACGAGCTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGC 36370050 Query 117187 CTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGC---GCGTCAGGGAGAT 117243 ||| || |||||| ||| |||| || ||| ||| || | || || || Sbjct 36370049 CTGCCTGATGTTCAGGCACCTGGTACACAAGCCG---CCGGAGCAAAGAGTACAAGAAAT 36369993 Query 117244 CGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCT 117303 | ||| | |||| || || |||||| || ||||| || || ||||| ||| || Sbjct 36369992 CATCATCAACGCAGTGAGGATAGAGCAGGAGTTTCTCACGGAGGCCCTGCCTGTGAAGCT 36369933 Query 117304 GCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCT 117363 | || | | ||| |||| ||| |||||||| ||||| || |||||||| | Sbjct 36369932 CATCGGGATAAGCTGCACCCTGATGAAGCACTACATCGAATTCGTGGCGGACAGGCTTAT 36369873 Query 117364 GCTCGAGCT 117372 ||| ||||| Sbjct 36369872 GCTGGAGCT 36369864 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || | ||| ||||||||| | |||| || ||| || | Sbjct 39797391 ATGCAGATTTTCGTGAAGACCCTTATGGGGAAAACCATCCCGCTCGAGGTTGAACCCTCG 39797450 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||||| || || | | || || || || || | || ||| Sbjct 39797451 GACACTATAGAAAATGTCAAGGCCAAGATCCAGGGTAAGGAAGGAATTCCTCCTGATCAG 39797510 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| |||||||| || | || || | ||||||||| Sbjct 39797511 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGTACTTTGTCTGACTACAAC 39797570 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||| |||||| |||| || ||| | |||||| Sbjct 39797571 ATCCAAAAGGAGTCCACCCTTCATTTGGTGTTG 39797603 >seq7 Length=85103860 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || ||||| | || || || ||||||||| | || ||||| ||| Sbjct 11187929 AATGCAGATCTTTGTGAAAACCTTAACTGGTAAGACCATCACCCTGGAGGTCGAGCCCAG 11187988 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| ||| || | ||||| || ||||||||| | ||||| Sbjct 11187989 TGACACCATCGAGAATGTCAAGGCAAAGATCCAGGACAAGGAAGGCATCCCCCCTGACCA 11188048 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || |||||||||||||| || | |||||||| ||||||||| Sbjct 11188049 GCAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 11188108 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| |||| ||||| || || ||||| | ||||| || Sbjct 11188109 CATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGCCTCAGGGGTGG 11188156 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || | ||||| ||||||||| |||| ||||| ||| Sbjct 11188158 ATGCAGATCTTTGTGAAGACCCTGATAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 11188217 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| ||| || | ||||| |||||||||||| | |||||| Sbjct 11188218 GACACCATCGAGAATGTCAAGGCAAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAG 11188277 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || |||||| ||||||| || | ||||||| |||||||||| Sbjct 11188278 CAGAGGCTGATCTTTGCAGGCAAAGAGCTGGAAGATGGCTGCACCCTGTCCGACTACAAC 11188337 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| |||| ||||| || || ||||| | ||||| || Sbjct 11188338 ATCCAGAAAGAGTCCACCCTGCACCTGGTCCTGCGCCTCAGGGGTGG 11188384 Score = 145 bits (160), Expect = 8e-30 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||| | || || || || ||||| ||||||||| | | || || || Sbjct 35411097 AAAATGCAAATCTTCATGAAGACCCTGACTGGCAAGACCATCACCCTGAAGGTGGAGCCC 35411156 Query 40747 ACCGACAGC-GTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | || |||| |||||| || || | || ||||||||||||||| | || Sbjct 35411157 AGTGACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGA 35411215 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| |||||||||| || ||||| |||||||| || | ||||| ||| | || Sbjct 35411216 CCAGCAGCGACTCATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTCTTTAATTA 35411275 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| ||| |||| ||||| || || | || | ||||| ||| Sbjct 35411276 CAACATCCAGAAAGAGTCCACCCTGCACCTGGTCCTCCGTCTCAGGGGTGGC 35411327 Score = 102 bits (112), Expect = 8e-17 Identities = 105/135 (78%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 36033357 AATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 36033298 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | | |||| |||||| || || | |||||||||||||||||| | |||| Sbjct 36033297 TGACACCATCGAGAACG-TCAAGGCCAAGATCCAGGACAAAGAGGGCATCCCCCCTGACC 36033239 Query 40808 AGCAACGACTCATCT 40822 |||| |||||||||| Sbjct 36033238 AGCAGCGACTCATCT 36033224 >seq2 Length=98408828 Score = 138 bits (152), Expect = 1e-27 Identities = 151/201 (75%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || || ||||| ||||||||| | || ||||| ||| Sbjct 12204189 AATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTCGAGCCCAG 12204248 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| ||| || | ||||| ||||| |||||| | ||||| Sbjct 12204249 TGACACCATCGAGAATGTCAAGGCAAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCA 12204308 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || |||||||||||||| || | |||||||| ||||||||| Sbjct 12204309 GCAGAGGCTGATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACCCTGTCCGACTACAA 12204368 Query 40869 CATCCAGAAGGAGGCCACGCT 40889 ||||||||| ||| |||| || Sbjct 12204369 CATCCAGAAAGAGTCCACCCT 12204389 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||| | || || || ||||| ||||||||||| |||| || ||| || | Sbjct 61256453 ATGCAGATTTTCATGAAGACCCTTACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 61256512 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||||| || || | || || || || || || | || ||| Sbjct 61256513 GACACTATAGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 61256572 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| ||| ||||| |||||||| || | || || | ||||||||| Sbjct 61256573 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGTACTTTGTCTGACTACAAC 61256632 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||| |||||| |||| || | | | |||||| Sbjct 61256633 ATCCAAAAGGAGTCCACCCTTCGTTTGGTGTTG 61256665 >seq42 Length=9663327 Score = 127 bits (140), Expect = 2e-24 Identities = 228/332 (69%), Gaps = 6/332 (2%) Strand=Plus/Plus Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 |||||||| || || || || || ||||||| || ||| ||| || | ||||| ||| Sbjct 3435652 GTGGCCTTTGCTGCTGTGGAAGGGATCTTCTTCTCTGGCTCTTTTGCGTCAATATTCTGG 3435711 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 ||||||||||| || || ||||| ||||| || || ||||||||| || ||| || Sbjct 3435712 CTCAAGAAACGGGGACTGATGCCTGGCCTTACGTTTTCCAACGAGCTTATTAGCAGAGAT 3435771 Query 117164 GAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGC 117223 |||||| | || || ||||||||||| || |||||| ||| |||| || ||| Sbjct 3435772 GAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAGGCACCTGGTACACAAGCCG--- 3435828 Query 117224 GCGGCGC---GCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 ||| || | || || ||| | | | |||| | || |||||| || ||| Sbjct 3435829 CCGGAGCAAAGAGTACAAGAAATCATTATCAACGCCTTGAGGATAGAGCAGGAGTTTCTC 3435888 Query 117281 ACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340 || || || ||||| ||| || | || | | ||| |||| ||| |||||| Sbjct 3435889 ACGGAGGCCCTGCCTGTGAAGCTCATCGGGATAAGCTGCACCCTGATGAAGCACTACATC 3435948 Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCT 117372 || ||||| || |||||||| |||| ||||| Sbjct 3435949 GAATTCGTGGCGGACAGGCTTATGCTGGAGCT 3435980 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 |||||||| || || || || || ||||||| || ||| ||| || | ||||| ||| Sbjct 3436538 GTGGCCTTTGCTGCTGTGGAAGGGATCTTCTTCTCTGGCTCTTTTGCGTCAATATTCTGG 3436597 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGAC 117163 ||||||||||| || || ||||| ||||| || || ||||||||| || ||| || Sbjct 3436598 CTCAAGAAACGGGGACTGATGCCTGGCCTTACGTTTTCCAACGAGCTTATTAGCAGAGAT 3436657 Query 117164 GAGG 117167 |||| Sbjct 3436658 GAGG 3436661 >seq33 Length=41749222 Score = 109 bits (120), Expect = 6e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| ||||||||||| |||| || ||| || | Sbjct 34672402 ATGCAGATTTTCGTGAAGACCCTTACGGGAAAAACCATCACGCTCGAGGTTGAACCCTCG 34672343 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||||| || || | || || || || || || | || ||| Sbjct 34672342 GACACTATAGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 34672283 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| ||| ||||| |||||||| || | || || | ||||||||| Sbjct 34672282 CAGAGGCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGTACTTTGTCTGACTACAAC 34672223 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||| |||||| |||| || ||| | |||||| Sbjct 34672222 ATCCAAAAGGAGTCCACCCTTCATTTGGTGTTG 34672190 >seq38 Length=14253900 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || |||||||| || || | ||| ||||||||||| |||| || ||| || | Sbjct 298909 ATGCAGATTTTCGTAAAGACCCTTAAGGGGAAAACCATCACGTTCGAGGTTGAACCCTCG 298850 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||||| || || | || || || || || || | || ||| Sbjct 298849 GACACTATAGAAAATGTCAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 298790 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| |||||||| || | || || | ||||||||| Sbjct 298789 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGTACTTTGTCTGACTACAAC 298730 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||| |||||| |||| || ||| | ||| || Sbjct 298729 ATCCAAAAGGAGTCCACCCTTCATTTGGTGCTG 298697 >seq40 Length=10521589 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || || || ||||| |||||||| | || ||||| || Sbjct 9789933 AACATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACTCTTGAGGTCGAGCCC 9789992 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||||| || || | ||||| || |||||||| | ||| Sbjct 9789993 AGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCCGAC 9790052 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || || | || || | || ||||| ||||||| || | | |||| ||||||| Sbjct 9790053 CATCAGAGGCTGATATTTGCCGGCAAGTAGCTGGAGGATGGAGGGACCCCGTCCGACTAC 9790112 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||| ||| |||| |||| || Sbjct 9790113 AACATCCAGAAAGAGTCCACTTTGCACCT 9790141 >seq17 Length=65020687 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || || ||||||||||| |||| || ||| | | Sbjct 35302384 ATGCAGATTTTCGTGAAGACCCTTACAGGAAAAACCATCACGCTCGAGGTTGAACTCTCG 35302325 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| |||| | || || | || || || || || || | || ||| Sbjct 35302324 GACACTATAGAAAATGTCAAAGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 35302265 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || |||| || ||||| |||||||| || || || || | ||||||||| Sbjct 35302264 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGACCGTACTTTGTCTGACTACAAC 35302205 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||| |||||| ||| || ||| | |||||| Sbjct 35302204 ATCCAAAAGGAGTCCATCCTTCATTTGGTGTTG 35302172 >seq61 Length=4506808 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||||||||| || ||||| || ||||| ||||| || || || || || || || | Sbjct 586064 TGGTGGCCTTTGCTGCCGTGGAAGGCGTTTTCTTCTCTGGGTCATTTGCTGCTATCTTCT 586123 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||| ||||| | |||||||||||||| || |||||| || || |||||| ||||| Sbjct 586124 GGCTGAAGAAGAGAGGCCTCATGCCCGGACTCACTTTCTCGAATGAACTCATCAGCAGGG 586183 Query 117162 ACGA 117165 | || Sbjct 586184 ATGA 586187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515178401079600