Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20ochrogaster_20[refseq_20GCF_5F000317375.1_202012-12-07] 6,335 sequences; 2,287,340,943 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4 385 7e-102 seq26 316 3e-81 seq87 233 3e-56 seq9 188 1e-42 seq42 181 2e-40 seq73 113 6e-20 seq61 107 3e-18 seq4671 84.2 3e-11 >seq4 Length=96435083 Score = 385 bits (426), Expect = 7e-102 Identities = 647/927 (70%), Gaps = 17/927 (2%) Strand=Plus/Plus Query 49618 AAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTTTGG 49674 |||||| |||| | | ||| ||| ||| || | ||||| || ||||| | || Sbjct 65463857 AAGTCAGCATCCAAGGTGAAAGAATTCTCTGCTGAATTTGACATCACCCCCATCCTCTGA 65463916 Query 49675 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATG 49734 || || ||||| || || || || || || || |||||||| | ||| |||||||||||| Sbjct 65463917 TACTCGCCCACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAAATATTTTCCATG 65463976 Query 49735 AAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 49794 || ||||| ||||| || || |||| || | || || | || || | || Sbjct 65463977 AAGTCAAATGGATTTTCTACTTTGAAAATCTTGCTGAACCCTAGCTCCAGCATAAGCCTG 65464036 Query 49795 TCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 49854 ||||| || ||||| || || ||||||| | || ||||| || || || || || Sbjct 65464037 TCCGCCACGAATTCGATGTACTGCTTCATCAGGGCGCAGTTCATCCCGATGAGCTTCACA 65464096 Query 49855 GGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA 49914 || || ||| | || ||||| || || || | || || | | ||||| ||| | Sbjct 65464097 GGCAGGGCCTCCGTGAGAAACTCCTGCTCTAGCCTCACTGCGT---TGATAAT-GATTTC 65464152 Query 49915 ACGGTTTCTTCACTC-GGTGGAT---GCAATAAATGTTTAAACATCAAACATGCGAAATC 49970 | |||| ||| || || | | | | || | ||||||| || || || Sbjct 65464153 TTGTACTCTTTGCTCCGGCGGCTTGTGTACCAGGTGCCTGAACATCAGGCAGGCAAAGCA 65464212 Query 49971 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 50030 ||||| | |||||| ||||| ||||| || |||||||||||||| || || ||||| || Sbjct 65464213 ACAGTGTAAACCCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCAG 65464272 Query 50031 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTAC 50090 || || || || ||||| ||||| ||| |||| || ||||| |||| ||| ||||| || Sbjct 65464273 TCCCCGTTTCTTGAGCCAGAATATTGACACAAAGGAGCCAGAGAAGAGGATCCCTTCCAC 65464332 Query 50091 TGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGTA-TCCACTTTT 50146 || |||||||| |||| || |||||||| | || |||| | |||| Sbjct 65464333 AGCAGCAAAGGCCACAACTCGTTCTCCATAGGTAGCTTCTTTGTCCCCCAATCCAACGCA 65464392 Query 50147 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 50206 | ||||| |||||||||||||| ||||||||||| || || || ||||| |||||||| | Sbjct 65464393 GGGCCCAGTCGGCCTTCTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATATT 65464452 Query 50207 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG-A 50265 | || || |||||||| ||||||||||| | ||||| |||||||| ||||| Sbjct 65464453 CCCTCTCTTTGGAATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAATGTT 65464512 Query 50266 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 50325 |||||||| ||||| || || || || |||||||| | ||||| |||| ||| |||||| Sbjct 65464513 ATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACCTGAACTTCT 65464572 Query 50326 GTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 50385 | || || || | | |||||||| ||||| || ||||| || ||||| || ||| Sbjct 65464573 TGGCTGAAGCGCTCCACCAGGTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGCC 65464632 Query 50386 AATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCT 50445 | || || |||||||||| | |||| |||| | || | ||| | | ||||| Sbjct 65464633 AGGACGTGAGATATAAAATGTCTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGAATATCC 65464692 Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 || || | || || || || | ||||| || || ||||| || || || ||||| | | Sbjct 65464693 TTGGAGAGGTCGACCTCCTCAGCCGTCCAGAAGGAAGCCTCGGCTTTCTTGTACATCTGC 65464752 Query 50506 CAGATGTCATGATATTGGATTGGGAAA 50532 ||||| ||||| |||| || ||||||| Sbjct 65464753 CAGATATCATGGTATTCGA-TGGGAAA 65464778 >seq26 Length=66536344 Score = 316 bits (350), Expect = 3e-81 Identities = 633/927 (68%), Gaps = 22/927 (2%) Strand=Plus/Plus Query 49618 AAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTTTGG 49674 |||||| |||| | | |||| ||| ||| || | || || || |||| | || Sbjct 31519072 AAGTCAGCATCCAAGGTAAAAGAATTCTCTGCTGAATTTGAAATCACCTCCATCCTCTGA 31519131 Query 49675 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATG 49734 || |||||||| || || || | || || || || ||||| | ||| |||||||||| | Sbjct 31519132 TACTCACCCACTCGCTTCTCAAGGAAGTTTGTCTTCCCTTCTAGTGAAATATTTTCCACG 31519191 Query 49735 AAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 49794 || ||||| ||||| || || |||| || | || || | || || | | Sbjct 31519192 AAGTCAAAAGGATTTTCTACTTTGGAAATCTTGCTGAACCCTAGCTCCAGCATAAGCGTG 31519251 Query 49795 TCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 49854 || || || ||||| || || ||||| | || ||||| | || || || || Sbjct 31519252 TCGGCCACGAATTCGATGTACCGCTTCATGAGGGTGCAGTTCATCCTGATGAGCTTCACA 31519311 Query 49855 GGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA 49914 || || ||| | || ||||| | || | || || || | | ||||| ||| | Sbjct 31519312 GGCAGGGCCTCCGTGAGAAACACCTGCTTTATCCTCACTGCGT---TGATAAT-GATTTC 31519367 Query 49915 ACGGTTTCTTCACTC-GGTGGAT-GC--AATAAATGTTTAAACATCAAACATGCGAAATC 49970 | |||| ||| || || | || | | || | ||||||| || || || | Sbjct 31519368 TTGTACTCTTTGCTCTGGCGGCTTGCTTACCAGGTGCCTGAACATCAGGCAGGCAAAGCC 31519427 Query 49971 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 50030 ||||| | || ||| ||||| ||||| || || |||||||| || || || ||||| || Sbjct 31519428 ACAGTGTAAACGCTCATCTCTGCTAATAAGCTCTTTGGAAAATGTAAGGCCAGGCATCAG 31519487 Query 50031 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTAC 50090 || | || || ||||| ||||| |||||||| || ||||| |||||||| ||||||| Sbjct 31519488 TCCCTGTTTCTTGAGCCAGAATATTGACGCAAAAGAGCCAGAGAAGAAGATGTCTTCTAC 31519547 Query 50091 TGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGT----ATCCACTTTT 50146 || |||||||| |||| ||| |||||||| | | | | | | ||||| Sbjct 31519548 AGCAGCAAAGGCCACAACTCTTTCTCCATAGGTAGTCTTTTTGTCTCCAAATCCAACGCA 31519607 Query 50147 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 50206 | ||||| || |||| |||||| ||||||||||| || || || ||||| |||||||| | Sbjct 31519608 GGGCCCAGTCAGCCTACTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATATT 31519667 Query 50207 ttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAA 50266 | || || |||||||| || || || | ||||| |||||||| ||||| Sbjct 31519668 CCCTCTCTTTGGAATCTTTAAT----GTGTCAATGAGGAGACTGTACATTTCAGAATGTT 31519723 Query 50267 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTG 50326 ||||||| ||||| || || || || |||||||| | ||||| |||| ||| |||||| Sbjct 31519724 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACCTGAACTTCTT 31519783 Query 50327 TACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCA 50386 | ||| || || | | |||||||| ||||| || |||||||||||||| || |||| Sbjct 31519784 GGCTAAAGCGCTCCACCAGGTTTTCATTGACTATGCCATCACTGGCTGCAAAGAAAGCCA 31519843 Query 50387 ATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTG-ATATCT 50445 || || |||||||||| | |||| ||| | || |||| | ||| ||||| Sbjct 31519844 GGACGTGAGATATAAAATGTCTCTCGTCAGGTTTCAG-CGCTTCCTAGTGTTGAATATCC 31519902 Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 || || | || || || || ||||||| || | ||||| || || || ||||| | | Sbjct 31519903 TTGGAGAGGTCCACCTCGTCAGCTGTCCAGAAGAAGGCCTCGGCTTTCTTGTACATCTGC 31519962 Query 50506 CAGATGTCATGATATTGGATTGGGAAA 50532 ||||| ||||| |||| | ||||||| Sbjct 31519963 CAGATATCATGGTATT-CAATGGGAAA 31519988 >seq87 Length=2570995 Score = 233 bits (258), Expect = 3e-56 Identities = 347/490 (71%), Gaps = 4/490 (1%) Strand=Plus/Plus Query 50045 GCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAA 50104 |||| ||||| ||| |||| || ||||| |||||||| |||||||| || ||||||| | Sbjct 1819200 GCCAGAATATTGACACAAAAGAGCCAGAGAAGAAGATCCCTTCTACAGCAGCAAAGGTCA 1819259 Query 50105 CAAGTCTCTCTCCATAACTGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCT 50161 ||| || |||||||| | || |||| ||||| | | ||| ||||||| Sbjct 1819260 CAACTCGTTCTCCATAGGTAGCATCTTTGTCCCCAATCCAATGCACGGTCCAGTCGGCCT 1819319 Query 50162 TCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTAT 50221 ||||||| ||||||||||| || || || ||||| | ||||| | | || || || Sbjct 1819320 TCTTTTTCACACAAGGCATTGTCTCAATAGCATTGACAAGATATTCCCTCTCTTTGGAAT 1819379 Query 50222 CTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 50281 |||||| || || | || | ||||| |||||||| ||||| |||||||| ||||| | Sbjct 1819380 CTTTAATGTAGGTGACAATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGCAA 1819439 Query 50282 TCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAG 50341 | || || || |||||||| || ||||| |||| ||| |||||| | ||| | || Sbjct 1819440 TTTGGAAGCCATAGAAACAGCTGGCCTCTGTAACCTGAACTTCTTGGCTAAAGCACTCGA 1819499 Query 50342 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 50401 | | ||||||||| |||| ||| ||||| | |||| || |||| || || ||||| Sbjct 1819500 CCAGATTTTCATTGACTAATCCATCACTCGTCACAAAGAAAGCCAGGACGTGGGATATAA 1819559 Query 50402 AATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTT 50461 ||||| | |||| |||| | || | ||| | | ||||| || || | || || | Sbjct 1819560 AATGTCTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGAATATCCTTGGAGAGGTCCACCT 1819619 Query 50462 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATT 50521 | || | |||| || || ||||| || || || ||| | | |||||| ||||| || | Sbjct 1819620 CCTCAGCCATCCAGAAGGAGGCCTCGGCTTTCTTGTAC-TCTGCCAGATATCATGGTACT 1819678 Query 50522 GGATTGGGAA 50531 ||| || || Sbjct 1819679 CGATAGGAAA 1819688 >seq9 Length=86001432 Score = 188 bits (208), Expect = 1e-42 Identities = 405/598 (68%), Gaps = 18/598 (3%) Strand=Plus/Plus Query 49618 AAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTTTGG 49674 |||||| |||| | | ||| ||| ||| || | ||||| || ||||| | || Sbjct 36369702 AAGTCAGCATCCAAGGTGAAAGAATTCTCTGCTGAATTTGACATCACCCCCATCCTCTGA 36369761 Query 49675 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATG 49734 || | ||||| || || || || || || || || ||||| | ||| |||||||||||| Sbjct 36369762 TACTTGCCCACGCGCTTCTCAAAGAAGTTTGTCTTCCCTTCTAGTGAAATATTTTCCATG 36369821 Query 49735 AAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 49794 | ||||||||||| || || |||| || | ||||| | || || | || Sbjct 36369822 GAGTCAAACGGATTTTCTACTTTGAAAATCTTGCTGAATCCTAGCTCCAGCATAAGCCTG 36369881 Query 49795 TCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 49854 ||||| || ||||| || || ||||||| || | || || || || || || Sbjct 36369882 TCCGCCACGAATTCGATGTAGTGCTTCATCAGGGTGCAGCTTATCCCGATGAGCTTCACA 36369941 Query 49855 GGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA 49914 || || ||| | || ||||| || || || || || || | | || || ||| | Sbjct 36369942 GGCAGGGCCTCCGTGAGAAACTCCTGCTCTATCCTCACTGCGT---TGATGAT-GATTTC 36369997 Query 49915 ACGGTTTCTTCACTC-GGTGGAT---GCAATAAATGTTTAAACATCAAACATGCGAAATC 49970 | |||| ||| || || | | | | || | ||||||| || || || || Sbjct 36369998 TTGTACTCTTTGCTCCGGCGGCTTGTGTACCAGGTGCCTGAACATCAGGCAGGCAAAGTC 36370057 Query 49971 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 50030 ||||| | |||||| ||||| ||||| || |||||||||||||| || || ||||| || Sbjct 36370058 ACAGTGTAAACCCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCAG 36370117 Query 50031 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTAC 50090 || | || | ||||| ||||| |||||||| || |||| ||||||| ||||| | Sbjct 36370118 TCCCAGTTTCCTGAGCCAGAATATTGACGCAAAAGAGCCAG---AGAAGATCCCTTCCAT 36370174 Query 50091 TGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGTATCCACTTTTG 50147 || |||||||| |||| || |||||||| | | | |||| ||||| | Sbjct 36370175 AGCAGCAAAGGCCACAACTCGTTCTCCATAGGTAGCTTCTTTGTCCCCAATCCAACGCAG 36370234 Query 50148 AGCCCAATCGGCCTTCTTTTT-TACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204 ||||| || ||||||||||| ||||||||||| || || || ||||| ||||| || Sbjct 36370235 GGCCCAGTCAGCCTTCTTTTTCCACACAAGGCATTGTCTCAATAGCATTGAAGAGCTA 36370292 >seq42 Length=9663327 Score = 181 bits (200), Expect = 2e-40 Identities = 347/507 (68%), Gaps = 11/507 (2%) Strand=Plus/Minus Query 49618 AAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTTTTGG 49674 |||||| |||| | | ||| ||| ||| || | ||||| || ||||| | || Sbjct 3436142 AAGTCAGCATCCAAGGTGAAAGAATTCTCTGCTGAATTTGACATCACCCCCATCCTCTGA 3436083 Query 49675 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTCCATG 49734 || | ||||| || || || || || || || || ||||| | ||| |||||||||||| Sbjct 3436082 TACTTGCCCACGCGCTTCTCAAAGAAGTTTGTCTTCCCTTCTAGTGAAATATTTTCCATG 3436023 Query 49735 AAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 49794 | ||||||||||| || || |||| || | ||||| | || || | || Sbjct 3436022 GAGTCAAACGGATTTTCTACTTTGAAAATCTTGCTGAATCCTAGCTCCAGCATAAGCCTG 3435963 Query 49795 TCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 49854 ||||| || ||||| || || ||||||| || | || || || || || || Sbjct 3435962 TCCGCCACGAATTCGATGTAGTGCTTCATCAGGGTGCAGCTTATCCCGATGAGCTTCACA 3435903 Query 49855 GGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGATCTA 49914 || || ||| | || ||||| || || || || | || | | ||||| ||| | Sbjct 3435902 GGCAGGGCCTCCGTGAGAAACTCCTGCTCTATCCTCAAGGCGT---TGATAAT-GATTTC 3435847 Query 49915 ACGGTTTCTTCACTC-GGTGGAT---GCAATAAATGTTTAAACATCAAACATGCGAAATC 49970 | |||| ||| || || | | | | || | ||||||| || || || || Sbjct 3435846 TTGTACTCTTTGCTCCGGCGGCTTGTGTACCAGGTGCCTGAACATCAGGCAGGCAAAGTC 3435787 Query 49971 GCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAG 50030 ||||| | |||||| ||||| ||||| || |||||||||||||| || || ||||| || Sbjct 3435786 ACAGTGTAAACCCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCAG 3435727 Query 50031 GCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTAC 50090 || || || || ||||| ||||| |||||||| || ||||| |||||||| ||||| || Sbjct 3435726 TCCCCGTTTCTTGAGCCAGAATATTGACGCAAAAGAGCCAGAGAAGAAGATCCCTTCCAC 3435667 Query 50091 TGCGGCAAAGGCAACAAGTCTCTCTCC 50117 || |||||||| |||| || ||||| Sbjct 3435666 AGCAGCAAAGGCCACAACTCGTTCTCC 3435640 Score = 158 bits (174), Expect = 2e-33 Identities = 141/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 50149 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttt 50208 ||||| |||||||||||||| ||||||||||| || || || ||||| |||||||| | Sbjct 3435477 GCCCAGTCGGCCTTCTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATATTCC 3435418 Query 50209 ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 50268 | || || |||||||| ||||||||||| | ||||| |||||||| ||||| ||| Sbjct 3435417 CTCTCTTTGGAATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAATGTATG 3435358 Query 50269 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 50325 ||||| ||||| || || || || |||||||| | ||||| |||| ||| |||||| Sbjct 3435357 TTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACCTGAACTTCT 3435301 Score = 149 bits (164), Expect = 9e-31 Identities = 133/167 (80%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 50149 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGttt 50208 ||||| |||||||||||||| ||||||||||| || || || ||||| |||||||| | Sbjct 3436363 GCCCAGTCGGCCTTCTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATATTCC 3436304 Query 50209 ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATG 50268 | || || |||||||| ||||||||||| | ||||| |||||||| ||||| ||| Sbjct 3436303 CTCTCTTTGGAATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAATGTATG 3436244 Query 50269 TTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 ||||| ||||| || || || || |||||||| | ||||| ||||| Sbjct 3436243 TTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAAT 3436197 Score = 129 bits (142), Expect = 8e-25 Identities = 110/136 (81%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||||| || |||||||||||||| || || ||||| || || || || | Sbjct 3436661 CCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCAGTCCCCGTTTCT 3436602 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| |||||||| || ||||| |||||||| ||||| || || ||||||| Sbjct 3436601 TGAGCCAGAATATTGACGCAAAAGAGCCAGAGAAGAAGATCCCTTCCACAGCAGCAAAGG 3436542 Query 50102 CAACAAGTCTCTCTCC 50117 | |||| || ||||| Sbjct 3436541 CCACAACTCGTTCTCC 3436526 >seq73 Length=3316092 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| || || || ||||| || |||||||| || || || | Sbjct 2397345 ACCTGAAATTCTCCTGACAAGACCCTGCGCGTGTAGATGTTACTGGTGTAAGGCTCAATG 2397286 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 ||||||||||| |||| ||| ||||||||||| || || ||||| || || | | |||| Sbjct 2397285 GATTCATTATTCCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 2397226 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 2397225 CTGTTTCTTATACCATA 2397209 Score = 93.3 bits (102), Expect = 6e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| ||||||||||| |||||| ||| | || || || || ||||| | Sbjct 2400521 TCCAGCCGTAGAAGTGCATACTCGTGAGTTTGCCATAGTTGGGCTCAGCAATGTGGATGT 2400462 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 | | ||| || |||||||| ||||| || || || || || ||||| || | | |||| Sbjct 2400461 TTAAAGACTGGCTTTGATCAATGAAAGCGCCTCTCTCGGCGGCCATCTTGAGAACAGTCT 2400402 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | || ||||| | || ||||| | |||| | || || |||| Sbjct 2400401 TCTGAGAGATCTCCCACACCGTCTTATAGAGCTGCTTCAGGTCATCAGGAA 2400351 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||| ||||| |||||||| ||||||||||| || | || ||||| | || || ||| Sbjct 2391261 ACTCGCTTCATGAAGAGATCCGGAATCCAAAGTGCAAAGAAGAGATCCCGGGCTCGCTGC 2391202 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || || ||||| ||||| || | || |||||| | | || || ||||||| || Sbjct 2391201 TCTTCCTTCCCTGTGTTCTTCTTCAAGTCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 2391142 Query 80059 TCCAAGTATATGGC 80072 |||| ||| || || Sbjct 2391141 TCCAGGTAAATAGC 2391128 >seq61 Length=4506808 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || || || || || ||||| || || || |||||||||||||| ||||| | ||| || Sbjct 586187 TCATCCCTGCTGATGAGTTCATTCGAGAAAGTGAGTCCGGGCATGAGGCCTCTCTTCTTC 586128 Query 50044 AGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCA 50103 ||||| || || | |||||||||||||| ||||| | ||||| || || |||||||| Sbjct 586127 AGCCAGAAGATAGCAGCAAATGACCCAGAGAAGAAAACGCCTTCCACGGCAGCAAAGGCC 586068 Query 50104 ACAAGTCTCTCTCC 50117 || | |||||| || Sbjct 586067 ACCACTCTCTCCCC 586054 >seq4671 Length=1285 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||||| ||||||||||| | ||||| |||||||| ||||| |||||||| ||||| Sbjct 1203 ATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGC 1262 Query 50280 CATCTGAAATCCGTAGAAACA 50300 || || || || |||||||| Sbjct 1263 AATTTGGAAGCCATAGAAACA 1283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718211922089400