Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20ochrogaster_20[refseq_20GCF_5F000317375.1_202012-12-07] 6,335 sequences; 2,287,340,943 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq4 232 2e-55 seq26 170 4e-37 seq7 156 1e-32 seq17 147 5e-30 seq38 145 2e-29 seq33 143 6e-29 seq42 141 2e-28 seq2 140 7e-28 seq9 134 3e-26 seq22 122 2e-22 seq87 111 4e-19 seq16 104 5e-17 seq3 95.1 3e-14 >seq4 Length=96435083 Score = 232 bits (256), Expect = 2e-55 Identities = 604/912 (66%), Gaps = 12/912 (1%) Strand=Plus/Minus Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788 |||||| ||| ||||||||| | |||| ||||| || ||||| | || || || || Sbjct 65464761 TGATATCTGGCAGATGTACAAGAAAGCCGAGGCTTCCTTCTGGACGGCTGAGGAGGTCGA 65464702 Query 268789 TCTGTCTTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATC 268848 || || | || | | | ||| || | ||||| || || ||| |||||||| Sbjct 65464701 CCTCTCCAAGGATATTCAACACTGGGAAGCGCTGAAACCCGACGAGAGACATTTTATATC 65464642 Query 268849 TTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAA 268908 | | | || || || ||||| | |||||||| || || || ||||| || || ||| Sbjct 65464641 TCACGTCCTGGCTTTCTTTGCTGCGAGTGATGGCATAGTCAATGAAAACCTGGTGGAGCG 65464582 Query 268909 GTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTAT 268968 ||| | ||||| || ||| || | || ||| | ||||| || || ||||| || || || Sbjct 65464581 CTTCAGCCAAGAAGTTCAGGTTACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCAT 65464522 Query 268969 AGAAAATATT-CATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACA 269027 ||||| || ||||| || ||||||||||| | || |||||||| || | ||| || Sbjct 65464521 GGAAAACATAACATTCTGAAATGTACAGTCTCCTCATCGATACTTACATTAAAGATTCCA 65464462 Query 269028 ACGAAAAGAAAAGACTATTTTCTTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCT 269086 | || | | || || || | |||| |||| | ||| ||||||| ||| || | Sbjct 65464461 AAGAGAGGGAATATCTCTTCAATGCTATTGAGA-CAATGCCTTGTGTGAAAAAGAAGGCC 65464403 Query 269087 GAATGGGCTCTGAAATGGATAAACG---ATAGC-GCGCCTTACGGAGAAAGGTTAGTTGC 269142 || ||||| ||| ||||| | | || || | || |||||| | | || || Sbjct 65464402 GACTGGGCCCTGCGTTGGATTGGGGGACAAAGAAGCTACCTATGGAGAACGAGTTGTGGC 65464343 Query 269143 TTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAA 269202 ||||| ||||| ||||| || |||| || || || |||| | || || ||| | || Sbjct 65464342 CTTTGCTGCTGTGGAAGGGATCCTCTTCTCTGGCTCCTTTGTGTCAATATTCTGGCTCAA 65464283 Query 269203 GAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGG 269262 |||| | || || ||||| || | || || || ||||| | || ||||| || || || Sbjct 65464282 GAAACGGGGACTGATGCCTGGCCTTACGTTTTCCAACGAGCTTATTAGCAGAGATGAGGG 65464223 Query 269263 TTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCA 269322 ||||||||| ||| || || | | || | | || |||||| || | | Sbjct 65464222 TTTACACTGTTGCTTTGCCTGCCTGATGTT---CAGGCACCTGGTACACAAGCCGCCGGA 65464166 Query 269323 AGATAGAGTATACGAAATTATAGATTCA-GCTGTTTCTGTAGAAACAGAATTTCTAACGG 269381 | |||||| | ||||| || || | || || |||| || ||||| |||| Sbjct 65464165 GCAAAGAGTACAAGAAATCAT-TATCAACGCAGTGAGGCTAGAGCAGGAGTTTCTCACGG 65464107 Query 269382 AAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGT 269441 | || || || | | || ||||| ||||| || ||||| | || || | | Sbjct 65464106 AGGCCCTGCCTGTGAAGCTCATCGGGATGAACTGCGCCCTGATGAAGCAGTACATCGAAT 65464047 Query 269442 TCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATC 269501 |||| | || || | || || ||||||| || || | | || || ||||||| Sbjct 65464046 TCGTGGCGGACAGGCTTATGCTGGAGCTAGGGTTCAGCAAGATTTTCAAAGTAGAAAATC 65463987 Query 269502 CGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGG 269561 | ||| || ||||| ||||| ||| ||||||| ||| | || ||||| |||||||| | Sbjct 65463986 CATTTGACTTCATGGAAAATATTTCACTAGAAGGAAAGACAAACTTCTTTGAGAAGCGAG 65463927 Query 269562 TAAGTAACTATCAGAAAATGGGTGTAATGTCTACTAAAGAAGAAAATATTTTCACTACAG 269621 | | | ||||||| ||||| || ||||| | | || ||| ||| |||||| | Sbjct 65463926 TGGGCGAGTATCAGAGGATGGGGGTGATGTCAAATTCAGCAGAGAATTCTTTCACCTTGG 65463867 Query 269622 ATGCAGAATTCT 269633 |||| || |||| Sbjct 65463866 ATGCTGACTTCT 65463855 >seq26 Length=66536344 Score = 170 bits (188), Expect = 4e-37 Identities = 594/915 (65%), Gaps = 23/915 (3%) Strand=Plus/Minus Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788 |||||| ||| ||||||||| | |||| || | || ||||| | || || || || Sbjct 31519971 TGATATCTGGCAGATGTACAAGAAAGCCGAGGCCTTCTTCTGGACAGCTGACGAGGTGGA 31519912 Query 268789 TCTGTCTTATGACTTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATC 268848 || || | || | | | | | || | ||||| || || ||| |||||||| Sbjct 31519911 CCTCTCCAAGGATATTCAACACTAGGAAGCGCTGAAACCTGACGAGAGACATTTTATATC 31519852 Query 268849 TTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAA 268908 | | | || || || ||||||| |||||||| || || || ||||| || || ||| Sbjct 31519851 TCACGTCCTGGCTTTCTTTGCAGCCAGTGATGGCATAGTCAATGAAAACCTGGTGGAGCG 31519792 Query 268909 GTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTAT 268968 || | ||||| || ||| || | || ||| | ||||| || || ||||| || || || Sbjct 31519791 CTTTAGCCAAGAAGTTCAGGTTACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCAT 31519732 Query 268969 AGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAA 269028 ||||| | ||||| || ||||||||||| | || || || || | ||| ||| Sbjct 31519731 GGAAAACAAACATTCTGAAATGTACAGTCTCCTCATTGACAC----ATTAAAGATTCCAA 31519676 Query 269029 CGAAAAGAAAAGACTATTTTCTTCTA-TGAGAACTATGGACTGTGTGAGaaaaaaaTCTG 269087 || | | || || || | ||| |||| || ||| ||||||| ||| | ||| Sbjct 31519675 AGAGAGGGAATATCTCTTCAATGCTATTGAG-ACAATGCCTTGTGTGAAAAAGTAGGCTG 31519617 Query 269088 AATGGGCTCTGAAATGGAT----AAACGATAGCGCGCCTTACGGAGAAAGGTTAGTTGCT 269143 | ||||| ||| ||||| | || | | | | || |||||||| | || || Sbjct 31519616 ACTGGGCCCTGCGTTGGATTTGGAGACAAAAAGACTACCTATGGAGAAAGAGTTGTGGCC 31519557 Query 269144 TTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAG 269203 ||||| |||||||||| || ||||| || || |||||||| | || || ||| | ||| Sbjct 31519556 TTTGCTGCTGTAGAAGACATCTTCTTCTCTGGCTCTTTTGCGTCAATATTCTGGCTCAAG 31519497 Query 269204 AAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGT 269263 ||| || || ||||| || | || || || || || | || ||||| || || || Sbjct 31519496 AAACAGGGACTGATGCCTGGCCTTACATTTTCCAAAGAGCTTATTAGCAGAGATGAGCGT 31519437 Query 269264 TTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAA 269323 |||||||| | ||| || || | | || | | || | ||| || | | Sbjct 31519436 TTACACTGTGGCTTTGCCTGCCTGATGTT---CAGGCACCTGGTAAGCAAGCCGCCAGAG 31519380 Query 269324 GATAGAGTATACGAAATTATAGATTCA-GCTGTTTCTGTAGAAACA-GAATTTCTAACGG 269381 | |||||| | ||||| || || | || || || || || | ||||| |||| Sbjct 31519379 CAAAGAGTACAAGAAATCAT-TATCAACGCAGTGAGGATA-AAGCAGGTGTTTCTCACGG 31519322 Query 269382 AAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGT 269441 | || || || | | || ||| | ||||| ||| |||| || || | | Sbjct 31519321 AGGCCCTGCCTGTGAAGCTCATCAGGATGAACTGCACCCTCATGAAGCGGTACATCGAAT 31519262 Query 269442 TCGTATCTGATA-GAT--TGCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAA 269498 |||| | || | | | |||||| | ||||||| || || | | || || |||| Sbjct 31519261 TCGTGGCCGACACGCTTATGCTGGAG---CTAGGGTTCAGCAAGATTTCCAAAGTAGAAA 31519205 Query 269499 ATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGC 269558 |||| ||| || |||| ||||| ||| ||||||| ||| | || ||| | ||||||| Sbjct 31519204 ATCCTTTTGACTTCGTGGAAAATATTTCACTAGAAGGGAAGACAAACTTCCTTGAGAAGC 31519145 Query 269559 GGGTAAGTAACTATCAGAAAATGGGTGTAATGTCTACTAAAGAAGAAAATATTTTCACTA 269618 | || || | ||||||| |||| || || || | | || ||| ||| ||| || Sbjct 31519144 GAGTGGGTGAGTATCAGAGGATGGAGGTGATTTCAAATTCAGCAGAGAATTCTTTTACCT 31519085 Query 269619 CAGATGCAGAATTCT 269633 ||||| || |||| Sbjct 31519084 TGGATGCTGACTTCT 31519070 Score = 86.0 bits (94), Expect = 1e-11 Identities = 146/211 (69%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | || || || || ||||| || ||||||| | ||| |||||||| || Sbjct 52781151 AGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGGCAAAGTATGGCCGTCTTCCAGC 52781092 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || ||| | || || ||||||| |||||||||| ||||||| |||| | ||| Sbjct 52781091 TGC---CCAACGAAGATCAGCCTCTACCGATCAGGAGGAATTCCTTTCCTATCGGGGATC 52781035 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || ||||||||||||| || || ||||| |||||| || ||||| || Sbjct 52781034 TTGATCTTTACATTTTCTATAGTGTCTGAGGGTTCAGTCTCTAGCCGCATGGTCTTCCCT 52780975 Query 104534 GTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 ||||| || | | || |||||||| |||| Sbjct 52780974 GTAAGCGTCTCCATGAAAATCTGCATCTTGT 52780944 >seq7 Length=85103860 Score = 156 bits (172), Expect = 1e-32 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || || || | || || |||||||| || || ||||| Sbjct 11188159 ATCCCACCCCTGAGGCGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCG 11188100 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| || ||||| || ||||| || |||||||| || ||||| Sbjct 11188099 GACAGGGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGG 11188040 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||| |||||||| || ||||| || | ||| || || || || Sbjct 11188039 GGGATGCCTTCCTTGTCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCG 11187980 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560 ||||| || || || ||||||||||| | ||||| ||||| ||||||||| Sbjct 11187979 ACCTCCAGGGTGATGGTCTTACCAGTTAAGGTTTTCACAAAGATCTGCATT 11187929 Score = 122 bits (134), Expect = 2e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || || | | | ||||| | || ||||| || || || ||| Sbjct 35411296 GTGGACTCTTTCTGGATGTTGTAATTAAAGAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 35411237 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || ||||| || || || ||||||||||| ||||| || || Sbjct 35411236 GCAAAGATGAGTCGCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTG 35411177 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || || || || |||| || || || ||||| ||||| || || Sbjct 35411176 ACGTTCTCAATGGTGTCACTGGGCTCCACCTTCAGGGTGATGGTCTTGCCAGTCAGGGTC 35411117 Query 104543 TTTACAAATATCTGCATTTTGT 104564 || | || || |||||||||| Sbjct 35411116 TTCATGAAGATTTGCATTTTGT 35411095 >seq17 Length=65020687 Score = 147 bits (162), Expect = 5e-30 Identities = 151/195 (77%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 || || || || || || |||||||| | ||| | | ||||| || || || |||||| Sbjct 35302191 GACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGGTCATCTTCCAGCTGCTTGCCAGCA 35302250 Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 || || |||||||| ||||||||||| |||||||| |||||||| ||||| ||||| ||| Sbjct 35302251 AAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCTTTGACA 35302310 Query 104486 TTTTCTACGGTATCGCTAG-GTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTT 104544 ||||||| || || | || |||| ||||| || || || || || || ||||| || || Sbjct 35302311 TTTTCTATAGTGTC-CGAGAGTTCAACCTCGAGCGTGATGGTTTTTCCTGTAAGGGTCTT 35302369 Query 104545 TACAAATATCTGCAT 104559 || || |||||||| Sbjct 35302370 CACGAAAATCTGCAT 35302384 >seq38 Length=14253900 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || || || | ||| | || || || || || || || |||||||| | ||| | Sbjct 298692 AGTCTCAGCACCAAATGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGG 298751 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 || ||||| || || || |||||||| || |||||||| ||||||||||| |||||||| Sbjct 298752 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCC 298811 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| ||||| || || |||||||||| || || ||||| ||||| | || Sbjct 298812 TTATCCTGGATCTTGGCCTTGACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAACGTG 298871 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || |||| || ||||| || |||||||| Sbjct 298872 ATGGTTTTCCCCTTAAGGGTCTTTACGAAAATCTGCAT 298909 >seq33 Length=41749222 Score = 143 bits (158), Expect = 6e-29 Identities = 150/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || |||||||| | ||| | || ||||| || || || ||| Sbjct 34672206 GTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGGCCATCTTCCAGCTGCTTGCCA 34672265 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || |||||||| ||||||||||| |||||||| |||||||| ||||| || || Sbjct 34672266 GCGAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTG 34672325 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||||| || || ||||| ||||| || || || || || || ||||| || Sbjct 34672326 ACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTTCCCGTAAGGGTC 34672385 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 34672386 TTCACGAAAATCTGCAT 34672402 >seq42 Length=9663327 Score = 141 bits (156), Expect = 2e-28 Identities = 339/510 (66%), Gaps = 7/510 (1%) Strand=Plus/Plus Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 |||||| | | || || ||||| ||||| ||||| || ||||| || || |||||||| Sbjct 3435640 GGAGAACGAGTTGTGGCCTTTGCTGCTGTGGAAGGGATCTTCTTCTCTGGCTCTTTTGCG 3435699 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245 | || || ||| | |||||| | || || ||||| || | || || || ||||| | Sbjct 3435700 TCAATATTCTGGCTCAAGAAACGGGGACTGATGCCTGGCCTTACGTTTTCCAACGAGCTT 3435759 Query 269246 ATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTT 269305 || ||||| || || ||||||||||| ||||| || || | | || | | || Sbjct 3435760 ATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTT---CAGGCACCTG 3435816 Query 269306 TCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTG--TAG 269363 |||||| || | | | |||||| | ||||| || ||| | || | ||| Sbjct 3435817 GTACACAAGCCGCCGGAGCAAAGAGTACAAGAAATCAT--TATCAACGCCTTGAGGATAG 3435874 Query 269364 AAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGA 269423 | || ||||| ||||| || || || | | || ||||| || | ||| || Sbjct 3435875 AGCAGGAGTTTCTCACGGAGGCCCTGCCTGTGAAGCTCATCGGGATAAGCTGCACCCTGA 3435934 Query 269424 TGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAA 269483 ||| | || || | ||||| | || || | || || |||| || || || | Sbjct 3435935 TGAAGCACTACATCGAATTCGTGGCGGACAGGCTTATGCTGGAGCTAGGATTCAGCAAGA 3435994 Query 269484 AATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTA 269543 | || || |||||||||||| | ||||| ||||| ||| ||||||| ||| | | Sbjct 3435995 TTTTCAAAGTAGAAAATCCGTTTGACTCCATGGAAAATATTTCACTAGAAGGGAAGACAA 3436054 Query 269544 ATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTCTACTAAAGAAG 269603 | ||||| |||||||| || | || ||||||| ||||| || ||||| | | || || Sbjct 3436055 ACTTCTTTGAGAAGCGCGTGGGCAAGTATCAGAGGATGGGGGTGATGTCAAATTCAGCAG 3436114 Query 269604 AAAATATTTTCACTACAGATGCAGAATTCT 269633 | ||| |||||| ||||| || |||| Sbjct 3436115 AGAATTCTTTCACCTTGGATGCTGACTTCT 3436144 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 269489 AACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTC 269548 || || |||||||||||| || ||||| ||||| ||| ||||||| ||| | || ||| Sbjct 3438495 AAAGTAGAAAATCCGTTTGACTTCATGGAAAATATTTCACTAGAAGGGAAGACAAACTTC 3438554 Query 269549 TTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTCTACTAAAGAAGAAAAT 269608 || |||||||| || | | ||||||| ||||| || ||||| | | || ||| ||| Sbjct 3438555 TTTGAGAAGCGAGTGGGCGAGTATCAGAGGATGGGGGTGATGTCAAATTCAGCAGAGAAT 3438614 Query 269609 ATTTTCACTACAGATGCAGAATTCT 269633 |||||| ||||| || |||| Sbjct 3438615 TCTTTCACCTTGGATGCTGACTTCT 3438639 >seq2 Length=98408828 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || |||||||| | ||| | || ||||| || || || ||| Sbjct 61256649 GTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGGCCATCTTCCAGCTGCTTGCCA 61256590 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || |||||||| ||||||||||| |||||||| |||||||| ||||| || || Sbjct 61256589 GCGAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTG 61256530 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||||| || || ||||| ||||| || || || || || || ||||| || Sbjct 61256529 ACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTCCCCGTAAGGGTC 61256470 Query 104543 TTTACAAATATCTGCAT 104559 || | || |||||||| Sbjct 61256469 TTCATGAAAATCTGCAT 61256453 Score = 96.9 bits (106), Expect = 8e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 ||||| ||||| || |||||||| ||| || ||||||||||| || |||| |||| Sbjct 65165246 TCTTT-TGAATGTTGTAGTCAGACCAAGTAGAGCCATCTTCTAGTTGCTTACCAGTAAAA 65165304 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || |||||||| | ||||||||| ||| ||| |||||||| || || | || |||||| Sbjct 65165305 ATCAGCCTCTGCTTATCAGGAGGAATTTTTTC-TTATCCTGCATATTGGTCTTCACATTT 65165363 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 ||| || || ||||| | || ||||| || | || || | || || | | | Sbjct 65165364 ACTATAGTGTCTGAGGGTTCAAATTCGAGTGTGATGTTTTTCCCCATCAGGGTCATCATA 65165423 Query 104549 AATATCTGCATTTTG 104563 || ||||||| ||| Sbjct 65165424 AAACTCTGCATCTTG 65165438 >seq9 Length=86001432 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || |||||||| | ||| | || ||||| || || || ||| Sbjct 39797587 GTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGGCCATCTTCCAGCTGCTTGCCA 39797528 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| ||||||||||| |||||||| ||| |||| ||||| || || Sbjct 39797527 GCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTACCCTGGATCTTGGCCTTG 39797468 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||||| || || ||||| ||||| || | || || || || |||| || Sbjct 39797467 ACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGGGATGGTTTTCCCCATAAGGGTC 39797408 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 39797407 TTCACGAAAATCTGCAT 39797391 Score = 120 bits (132), Expect = 7e-22 Identities = 336/512 (66%), Gaps = 8/512 (2%) Strand=Plus/Minus Query 269123 TACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTT 269182 || |||||| | | || || ||||| ||| | ||||| || |||| | || |||||| Sbjct 36370204 TATGGAGAACGAGTTGTGGCCTTTGCTGCTATGGAAGGGATCTTCTCT---GGCTCTTTT 36370148 Query 269183 GCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAA 269242 || | || || ||| | | |||| || || ||||| || | || || || ||||| Sbjct 36370147 GCGTCAATATTCTGGCTCAGGAAACTGGGACTGATGCCTGGCCTTACGTTTTCCAACGAG 36370088 Query 269243 TTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTAT 269302 | || ||||| || || ||||||||||| ||||| || || | | || | | Sbjct 36370087 CTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAGGCAC--- 36370031 Query 269303 CTTTCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCA-GCTGTTTCTGT 269361 || |||||| || | | | |||||| | ||||| || || | || || | Sbjct 36370030 CTGGTACACAAGCCGCCGGAGCAAAGAGTACAAGAAATCATC-ATCAACGCAGTGAGGAT 36369972 Query 269362 AGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATC 269421 ||| || ||||| ||||| || || || | | || ||||| || | ||| Sbjct 36369971 AGAGCAGGAGTTTCTCACGGAGGCCCTGCCTGTGAAGCTCATCGGGATAAGCTGCACCCT 36369912 Query 269422 GATGATAGAATATATTAAGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAA 269481 ||||| | || || | ||||| | || || | || || |||| || || || Sbjct 36369911 GATGAAGCACTACATCGAATTCGTGGCGGACAGGCTTATGCTGGAGCTAGGATTCAGCAA 36369852 Query 269482 AAAATATAACGTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGC 269541 | | || || |||||||||||| | ||||| ||||| ||| ||||||| ||| | Sbjct 36369851 GATTTTCAAAGTAGAAAATCCGTTTGACTCCATGGAAAATATTTCACTAGAAGGGAAGAC 36369792 Query 269542 TAATTTCTTCGAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTCTACTAAAGA 269601 || ||||| |||||||| || | || ||||||| ||||| || ||||| | | || Sbjct 36369791 AAACTTCTTTGAGAAGCGCGTGGGCAAGTATCAGAGGATGGGGGTGATGTCAAATTCAGC 36369732 Query 269602 AGAAAATATTTTCACTACAGATGCAGAATTCT 269633 ||| ||| |||||| ||||| || |||| Sbjct 36369731 AGAGAATTCTTTCACCTTGGATGCTGACTTCT 36369700 >seq22 Length=61813736 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATT 104431 || ||||| || |||||| | | ||| || ||||| | ||| || ||| || || Sbjct 31288332 TTTTGAATGTTGTAGTCAAAGAAAGTAAGGCCATCTTCCACTTGCTTAGCAGGGAAGATC 31288391 Query 104432 AGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCT 104491 |||||||| | ||||||||| ||||||||||||| ||||||||| || ||| ||||||| Sbjct 31288392 AGCCTCTGCTAATCAGGAGGAATTCCTTCTTTATTCTGAATCTTGGCCCTTATATTTTCT 31288451 Query 104492 ACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAAT 104551 | || || || || | ||| ||||| ||||| || || |||| || || ||||| Sbjct 31288452 ATAGTGTCTGAGGGGTCAATCTCAAGTGTGATAGTTTTCCCCCTAAGGGTCTTGACAAAA 31288511 Query 104552 ATCTGCATTTTG 104563 | |||||| ||| Sbjct 31288512 AGCTGCATCTTG 31288523 >seq87 Length=2570995 Score = 111 bits (122), Expect = 4e-19 Identities = 247/368 (67%), Gaps = 11/368 (3%) Strand=Plus/Minus Query 268823 AAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGT 268882 ||||| || || ||| |||||||| | | || || || |||| |||||||| Sbjct 1819578 AAACCCGACGAGAGACATTTTATATCCCACGTCCTGGCTTTCTTTGTGACGAGTGATGGA 1819519 Query 268883 ATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGA 268942 | || || |||||||| || ||| || | ||||| || ||| || | || ||||| Sbjct 1819518 TTAGTCAATGAAAATCTGGTCGAGTGCTTTAGCCAAGAAGTTCAGGTTACAGAGGCCAGC 1819459 Query 268943 TGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTATTA 269002 ||||| || || ||||| || || || ||||| || ||||| || ||||||||||| | Sbjct 1819458 TGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTACAGTCTCCTC 1819399 Query 269003 ATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTTCTA-TGAGAAC 269061 || | || || || | ||| ||| || | | || || | | ||| |||| || Sbjct 1819398 ATTGTCACCTACATTAAAGATTCCAAAGAGAGGGAATATCTTGTCAATGCTATTGAG-AC 1819340 Query 269062 TATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGAT------AAACGATAG 269115 ||| ||||||| ||| || | || ||| | || | ||||| || ||| Sbjct 1819339 AATGCCTTGTGTGAAAAAGAAGGCCGACTGGACCGTGCATTGGATTGGGGACAAAGAT-- 1819282 Query 269116 CGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGG 269175 || | || |||||| | | || | ||||| ||||||||||| || ||||| || || Sbjct 1819281 -GCTACCTATGGAGAACGAGTTGTGACCTTTGCTGCTGTAGAAGGGATCTTCTTCTCTGG 1819223 Query 269176 GTCTTTTG 269183 ||||||| Sbjct 1819222 CTCTTTTG 1819215 >seq16 Length=69618829 Score = 104 bits (114), Expect = 5e-17 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || || || || |||||||| | ||| | | ||||| | || || ||| Sbjct 24326420 GTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTACGGCTATCTTCCAACTGCTTGCCA 24326479 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || |||||||| ||||||||||| |||||||| |||||||| ||||| || || Sbjct 24326480 GCGAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTG 24326539 Query 104483 ACATTTTCTA 104492 |||||||||| Sbjct 24326540 ACATTTTCTA 24326549 >seq3 Length=92994323 Score = 95.1 bits (104), Expect = 3e-14 Identities = 96/124 (77%), Gaps = 1/124 (1%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || || ||||| || |||||||| | ||| || ||||| || ||||| ||| || Sbjct 40326587 TCCTTTTGAATGTTCTAGTCAGACAAAGTATGGCCATCTTCCAGCTGTTTAAGGGCATAA 40326528 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 | | ||||||| ||||||| || ||||| ||||||||||||||||| | ||||||||| Sbjct 40326527 -TCAACCTCTGTGGATCAGGGGGAATTCCCTCTTTATCCTGAATCTTGACCTTTACATTT 40326469 Query 104489 TCTA 104492 |||| Sbjct 40326468 TCTA 40326465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151304944230180