Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20ochrogaster_20[refseq_20GCF_5F000317375.1_202012-12-07] 6,335 sequences; 2,287,340,943 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4 376 3e-99 seq26 347 2e-90 seq87 242 5e-59 seq9 196 6e-45 seq42 170 2e-37 seq73 113 6e-20 seq61 98.7 1e-15 seq7 86.0 8e-12 seq4671 84.2 3e-11 >seq4 Length=96435083 Score = 376 bits (416), Expect = 3e-99 Identities = 645/927 (70%), Gaps = 18/927 (2%) Strand=Plus/Plus Query 32319 AAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTTGG 32375 |||||| |||| | | ||| ||| ||| || | ||||| || ||||| | || Sbjct 65463857 AAGTCAGCATCCAAGGTGAAAGAATTCTCTGCTGAATTTGACATCACCCCCATCCTCTGA 65463916 Query 32376 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATG 32435 || || ||||| || || || || || || || || ||||||| ||| |||||||||||| Sbjct 65463917 TACTCGCCCACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAAATATTTTCCATG 65463976 Query 32436 AAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 32495 || || |||||||| || || |||| || | || || | || || | || Sbjct 65463977 AAGTCAAATGGATTTTCTACTTTGAAAATCTTGCTGAACCCTAGCTCCAGCATAAGCCTG 65464036 Query 32496 TCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 32555 || || || ||||| || || ||||||| | || ||||| || || || || || Sbjct 65464037 TCCGCCACGAATTCGATGTACTGCTTCATCAGGGCGCAGTTCATCCCGATGAGCTTCACA 65464096 Query 32556 GGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT-AGATCT 32614 || || ||| | || ||||| || || || | || |||| | ||||| | ||| Sbjct 65464097 GGCAGGGCCTCCGTGAGAAACTCCTGCTCTAGCCTCACTGCGT---TGATAATGATTTCT 65464153 Query 32615 T--ACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 32670 | ||| ||| || ||| || ||| | || | ||||||| || || || Sbjct 65464154 TGTACTCTTTGCTCCGGCGGCTTGTGTACCAGG--TGCCTGAACATCAGGCAGGCAAAGC 65464211 Query 32671 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 32730 ||||||| |||||| ||||| ||||| | |||||||||||||| || || ||||| | Sbjct 65464212 AACAGTGTAAACCCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCA 65464271 Query 32731 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 32790 | || || || || ||||| ||||| ||| |||| || ||||| |||| || ||||| | Sbjct 65464272 GTCCCCGTTTCTTGAGCCAGAATATTGACACAAAGGAGCCAGAGAAGAGGATCCCTTCCA 65464331 Query 32791 CTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTA-TCCACTTT 32846 | || |||||||| | || || |||||||| | | | |||| | |||| Sbjct 65464332 CAGCAGCAAAGGCCACAACTCGTTCTCCATAGGTAGCTTCTTTGTCCCCCAATCCAACGC 65464391 Query 32847 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 32906 | ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct 65464392 AGGGCCCAGTCGGCCTTCTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATAT 65464451 Query 32907 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG- 32965 | | || || |||||||| || ||||| || | ||||| |||||||| ||||| Sbjct 65464452 TCCCTCTCTTTGGAATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAATGT 65464511 Query 32966 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTC 33025 |||||||| ||||| ||||| || || ||||| || | ||||| |||| ||| ||||| Sbjct 65464512 TATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACCTGAACTTC 65464571 Query 33026 TGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33085 | | || || || | | |||||||| ||||| || ||||| || ||||| || || Sbjct 65464572 TTGGCTGAAGCGCTCCACCAGGTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGC 65464631 Query 33086 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATC 33145 || || || |||||||| | | ||||| ||| | || | ||| | | ||||| Sbjct 65464632 CAGGACGTGAGATATAAAATGTCTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGAATATC 65464691 Query 33146 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 33205 || || | || || || || | ||||| || || ||||| || || || ||||| | Sbjct 65464692 CTTGGAGAGGTCGACCTCCTCAGCCGTCCAGAAGGAAGCCTCGGCTTTCTTGTACATCTG 65464751 Query 33206 CCAGATGTCATGATATTGAATTGGAAA 33232 |||||| ||||| |||| || ||||| Sbjct 65464752 CCAGATATCATGGTATTCGATGGGAAA 65464778 >seq26 Length=66536344 Score = 347 bits (384), Expect = 2e-90 Identities = 644/936 (69%), Gaps = 23/936 (2%) Strand=Plus/Plus Query 32319 AAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTTGG 32375 |||||| |||| | | |||| ||| ||| || | || || || |||| | || Sbjct 31519072 AAGTCAGCATCCAAGGTAAAAGAATTCTCTGCTGAATTTGAAATCACCTCCATCCTCTGA 31519131 Query 32376 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATG 32435 || |||||||| || || || | || || || || ||||||| ||| |||||||||| | Sbjct 31519132 TACTCACCCACTCGCTTCTCAAGGAAGTTTGTCTTCCCTTCTAGTGAAATATTTTCCACG 31519191 Query 32436 AAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 32495 || || || ||||| || || |||| || | || || | || || | | Sbjct 31519192 AAGTCAAAAGGATTTTCTACTTTGGAAATCTTGCTGAACCCTAGCTCCAGCATAAGCGTG 31519251 Query 32496 TCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 32555 || || || ||||| || || ||||| | || ||||| | || || || || Sbjct 31519252 TCGGCCACGAATTCGATGTACCGCTTCATGAGGGTGCAGTTCATCCTGATGAGCTTCACA 31519311 Query 32556 GGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT-AGATCT 32614 || || ||| | || ||||| | || | || || |||| | ||||| | ||| Sbjct 31519312 GGCAGGGCCTCCGTGAGAAACACCTGCTTTATCCTCACTGCGT---TGATAATGATTTCT 31519368 Query 32615 T--ACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 32670 | ||| ||| || ||| || ||| | || | ||||||| || || || Sbjct 31519369 TGTACTCTTTGCTCTGGCGGCTTGCTTACCAGG--TGCCTGAACATCAGGCAGGCAAAGC 31519426 Query 32671 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 32730 | ||||||| || ||| ||||| ||||| | || |||||||| || || || ||||| | Sbjct 31519427 CACAGTGTAAACGCTCATCTCTGCTAATAAGCTCTTTGGAAAATGTAAGGCCAGGCATCA 31519486 Query 32731 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 32790 | || | || || ||||| ||||| |||||||| || ||||| ||||| || |||||| Sbjct 31519487 GTCCCTGTTTCTTGAGCCAGAATATTGACGCAAAAGAGCCAGAGAAGAAGATGTCTTCTA 31519546 Query 32791 CTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT----ATCCACTTT 32846 | || |||||||| | || ||| |||||||| | | | | | ||||| Sbjct 31519547 CAGCAGCAAAGGCCACAACTCTTTCTCCATAGGTAGTCTTTTTGTCTCCAAATCCAACGC 31519606 Query 32847 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 32906 | ||||| || |||| |||||| ||||||||||||||||| |||||||| |||||||| Sbjct 31519607 AGGGCCCAGTCAGCCTACTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATAT 31519666 Query 32907 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 32966 | | || || |||||||| ||| ||||| | ||||| |||||||| ||||| Sbjct 31519667 TCCCTCTCTTTGGAATCTTTAA----TGTGTCAATGAGGAGACTGTACATTTCAGAATGT 31519722 Query 32967 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCT 33026 ||||||| ||||| ||||| || || ||||| || | ||||| |||| ||| |||||| Sbjct 31519723 TTGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACCTGAACTTCT 31519782 Query 33027 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 33086 | ||| || || | | |||||||| ||||| || |||||||||||||| || ||| Sbjct 31519783 TGGCTAAAGCGCTCCACCAGGTTTTCATTGACTATGCCATCACTGGCTGCAAAGAAAGCC 31519842 Query 33087 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTG-ATATC 33145 | || || |||||||| | | ||||| ||| | || |||| | ||| ||||| Sbjct 31519843 AGGACGTGAGATATAAAATGTCTCTCGTCAGGTTTCAG-CGCTTCCTAGTGTTGAATATC 31519901 Query 33146 TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 33205 || || | ||||| || || ||||||| || | ||||| || || || ||||| | Sbjct 31519902 CTTGGAGAGGTCCACCTCGTCAGCTGTCCAGAAGAAGGCCTCGGCTTTCTTGTACATCTG 31519961 Query 33206 CCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 |||||| ||||| |||| ||| ||||| | ||| || Sbjct 31519962 CCAGATATCATGGTATTCAATGGGAAAGACAACGAA 31519997 >seq87 Length=2570995 Score = 242 bits (268), Expect = 5e-59 Identities = 349/490 (71%), Gaps = 4/490 (1%) Strand=Plus/Plus Query 32746 GCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 32805 |||| ||||| ||| |||| || ||||| ||||| || |||||||| || ||||||| | Sbjct 1819200 GCCAGAATATTGACACAAAAGAGCCAGAGAAGAAGATCCCTTCTACAGCAGCAAAGGTCA 1819259 Query 32806 TAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 32862 || || |||||||| | | | |||| ||||| | | ||| ||||||| Sbjct 1819260 CAACTCGTTCTCCATAGGTAGCATCTTTGTCCCCAATCCAATGCACGGTCCAGTCGGCCT 1819319 Query 32863 TCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTAT 32922 ||||||| ||||||||||||||||| |||||||| | ||||| | | || || || Sbjct 1819320 TCTTTTTCACACAAGGCATTGTCTCAATAGCATTGACAAGATATTCCCTCTCTTTGGAAT 1819379 Query 32923 CTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 32982 |||||| || || |||| | ||||| |||||||| ||||| |||||||| ||||| | Sbjct 1819380 CTTTAATGTAGGTGACAATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGCAA 1819439 Query 32983 TTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTG 33042 |||| || || ||||| || || ||||| |||| ||| |||||| | ||| | || Sbjct 1819440 TTTGGAAGCCATAGAAACAGCTGGCCTCTGTAACCTGAACTTCTTGGCTAAAGCACTCGA 1819499 Query 33043 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33102 | | ||||||||| |||| ||| ||||| | |||| || |||| || || ||||| Sbjct 1819500 CCAGATTTTCATTGACTAATCCATCACTCGTCACAAAGAAAGCCAGGACGTGGGATATAA 1819559 Query 33103 AATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTT 33162 ||| | | ||||| ||| | || | ||| | | ||||| || || | ||||| | Sbjct 1819560 AATGTCTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGAATATCCTTGGAGAGGTCCACCT 1819619 Query 33163 CTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATT 33222 | || | |||| || || ||||| || || || ||| | | |||||| ||||| || | Sbjct 1819620 CCTCAGCCATCCAGAAGGAGGCCTCGGCTTTCTTGTAC-TCTGCCAGATATCATGGTACT 1819678 Query 33223 GAATTGGAAA 33232 || ||||| Sbjct 1819679 CGATAGGAAA 1819688 >seq9 Length=86001432 Score = 196 bits (216), Expect = 6e-45 Identities = 404/596 (68%), Gaps = 14/596 (2%) Strand=Plus/Plus Query 32319 AAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTTGG 32375 |||||| |||| | | ||| ||| ||| || | ||||| || ||||| | || Sbjct 36369702 AAGTCAGCATCCAAGGTGAAAGAATTCTCTGCTGAATTTGACATCACCCCCATCCTCTGA 36369761 Query 32376 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATG 32435 || | ||||| || || || || || || || || ||||||| ||| |||||||||||| Sbjct 36369762 TACTTGCCCACGCGCTTCTCAAAGAAGTTTGTCTTCCCTTCTAGTGAAATATTTTCCATG 36369821 Query 32436 AAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 32495 | || || ||||| || || |||| || | ||||| | || || | || Sbjct 36369822 GAGTCAAACGGATTTTCTACTTTGAAAATCTTGCTGAATCCTAGCTCCAGCATAAGCCTG 36369881 Query 32496 TCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 32555 || || || ||||| || || ||||||| || | || || || || || || Sbjct 36369882 TCCGCCACGAATTCGATGTAGTGCTTCATCAGGGTGCAGCTTATCCCGATGAGCTTCACA 36369941 Query 32556 GGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTT 32615 || || ||| | || ||||| || || || || || |||| | || || | | Sbjct 36369942 GGCAGGGCCTCCGTGAGAAACTCCTGCTCTATCCTCACTGCGTTGATGATGATTTCTTGT 36370001 Query 32616 ACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAAACATCAAACATGCGAAATCGC 32673 ||| ||| || ||| || ||| | || | ||||||| || || || || | Sbjct 36370002 ACTCTTTGCTCCGGCGGCTTGTGTACCAGG--TGCCTGAACATCAGGCAGGCAAAGTCAC 36370059 Query 32674 AGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGC 32733 |||||| |||||| ||||| ||||| | |||||||||||||| || || ||||| || | Sbjct 36370060 AGTGTAAACCCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCAGTC 36370119 Query 32734 CACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTG 32793 | | || | ||||| ||||| |||||||| || |||| |||| || ||||| | | Sbjct 36370120 CCAGTTTCCTGAGCCAGAATATTGACGCAAAAGAGCCAG---AGAAGATCCCTTCCATAG 36370176 Query 32794 CCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAG 32850 | |||||||| | || || |||||||| | | | |||| ||||| | | Sbjct 36370177 CAGCAAAGGCCACAACTCGTTCTCCATAGGTAGCTTCTTTGTCCCCAATCCAACGCAGGG 36370236 Query 32851 CCCAATCGGCCTTCTTTTT-TACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 32905 |||| || ||||||||||| ||||||||||||||||| |||||||| ||||| || Sbjct 36370237 CCCAGTCAGCCTTCTTTTTCCACACAAGGCATTGTCTCAATAGCATTGAAGAGCTA 36370292 >seq42 Length=9663327 Score = 170 bits (188), Expect = 2e-37 Identities = 346/508 (68%), Gaps = 13/508 (3%) Strand=Plus/Minus Query 32319 AAGTCAACATCTAGAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTTTTTGG 32375 |||||| |||| | | ||| ||| ||| || | ||||| || ||||| | || Sbjct 3436142 AAGTCAGCATCCAAGGTGAAAGAATTCTCTGCTGAATTTGACATCACCCCCATCCTCTGA 3436083 Query 32376 TATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATG 32435 || | ||||| || || || || || || || || ||||||| ||| |||||||||||| Sbjct 3436082 TACTTGCCCACGCGCTTCTCAAAGAAGTTTGTCTTCCCTTCTAGTGAAATATTTTCCATG 3436023 Query 32436 AAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAATCTA 32495 | || || ||||| || || |||| || | ||||| | || || | || Sbjct 3436022 GAGTCAAACGGATTTTCTACTTTGAAAATCTTGCTGAATCCTAGCTCCAGCATAAGCCTG 3435963 Query 32496 TCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACT 32555 || || || ||||| || || ||||||| || | || || || || || || Sbjct 3435962 TCCGCCACGAATTCGATGTAGTGCTTCATCAGGGTGCAGCTTATCCCGATGAGCTTCACA 3435903 Query 32556 GGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT-AGATCT 32614 || || ||| | || ||||| || || || || | |||| | ||||| | ||| Sbjct 3435902 GGCAGGGCCTCCGTGAGAAACTCCTGCTCTATCCTCAAGGCGT---TGATAATGATTTCT 3435846 Query 32615 T--ACTGTTTCTTCACTCGG--TGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 32670 | ||| ||| || ||| || ||| | || | ||||||| || || || | Sbjct 3435845 TGTACTCTTTGCTCCGGCGGCTTGTGTACCAGG--TGCCTGAACATCAGGCAGGCAAAGT 3435788 Query 32671 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 32730 | ||||||| |||||| ||||| ||||| | |||||||||||||| || || ||||| | Sbjct 3435787 CACAGTGTAAACCCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCA 3435728 Query 32731 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTA 32790 | || || || || ||||| ||||| |||||||| || ||||| ||||| || ||||| | Sbjct 3435727 GTCCCCGTTTCTTGAGCCAGAATATTGACGCAAAAGAGCCAGAGAAGAAGATCCCTTCCA 3435668 Query 32791 CTGCCGCAAAGGCAATAAGTCTCTCTCC 32818 | || |||||||| | || || ||||| Sbjct 3435667 CAGCAGCAAAGGCCACAACTCGTTCTCC 3435640 Score = 161 bits (178), Expect = 1e-34 Identities = 142/177 (80%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 32850 GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttt 32909 ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||| | Sbjct 3435477 GCCCAGTCGGCCTTCTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATATTCC 3435418 Query 32910 ttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATG 32969 | || || |||||||| || ||||| || | ||||| |||||||| ||||| ||| Sbjct 3435417 CTCTCTTTGGAATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAATGTATG 3435358 Query 32970 TTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCT 33026 ||||| ||||| ||||| || || ||||| || | ||||| |||| ||| |||||| Sbjct 3435357 TTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACCTGAACTTCT 3435301 Score = 152 bits (168), Expect = 7e-32 Identities = 134/167 (80%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 32850 GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttt 32909 ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||| | Sbjct 3436363 GCCCAGTCGGCCTTCTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATATTCC 3436304 Query 32910 ttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATG 32969 | || || |||||||| || ||||| || | ||||| |||||||| ||||| ||| Sbjct 3436303 CTCTCTTTGGAATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAATGTATG 3436244 Query 32970 TTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 ||||| ||||| ||||| || || ||||| || | ||||| ||||| Sbjct 3436243 TTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAAT 3436197 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| ||||| ||||| | |||||||||||||| || || ||||| || || || || | Sbjct 3436661 CCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCAGTCCCCGTTTCT 3436602 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||| ||||| |||||||| || ||||| ||||| || ||||| || || ||||||| Sbjct 3436601 TGAGCCAGAATATTGACGCAAAAGAGCCAGAGAAGAAGATCCCTTCCACAGCAGCAAAGG 3436542 Query 32803 CAATAAGTCTCTCTCC 32818 | | || || ||||| Sbjct 3436541 CCACAACTCGTTCTCC 3436526 >seq73 Length=3316092 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| ||||| || || || ||||| || |||||||| || || || | Sbjct 2397345 ACCTGAAATTCTCCTGACAAGACCCTGCGCGTGTAGATGTTACTGGTGTAAGGCTCAATG 2397286 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 || |||||||| |||| ||| ||||||||||| ||||| ||||| || || | | |||| Sbjct 2397285 GATTCATTATTCCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 2397226 Query 62312 CTATTTCTAAGACCGTA 62328 || ||||| | ||| || Sbjct 2397225 CTGTTTCTTATACCATA 2397209 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 63446 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAAC 63505 || |||| || |||| | || || || || || | |||||||| || ||||||||| Sbjct 2385018 CTGGACAGCTGTGGACGGTTGGTCCCAGCGTTGAAGAGAGTAGGAGAGGCATGAGTAAAC 2384959 Query 63506 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63565 || || |||||||| || ||||| || ||||| || | || ||||| || ||||| Sbjct 2384958 CACTTCTCAGAAAGCAGGTTGTAGGTTTCAATTGCAGCATCGATATCTTCTTTGTGAATC 2384899 Query 63566 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63604 || || | || | ||| ||||| ||||| ||||||||| Sbjct 2384898 CCCACAGATACCCTCATCAACATATGCTGTGGTCTTTCA 2384860 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| ||||| || ||||||||||| |||||| ||| | || || || || ||||| | Sbjct 2400521 TCCAGCCGTAGAAGTGCATACTCGTGAGTTTGCCATAGTTGGGCTCAGCAATGTGGATGT 2400462 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 | | ||| || |||||||| ||||| || || || || || ||||| || | || |||| Sbjct 2400461 TTAAAGACTGGCTTTGATCAATGAAAGCGCCTCTCTCGGCGGCCATCTTGAGAACAGTCT 2400402 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62087 | || | || ||||| | || ||||| | |||| | || || |||| Sbjct 2400401 TCTGAGAGATCTCCCACACCGTCTTATAGAGCTGCTTCAGGTCATCAGGAA 2400351 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| || | ||| |||||||||||||| | || || || || || || || |||| | Sbjct 2379301 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCTAAGA 2379242 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 | ||||| || || || | |||||| | || || ||| | || || |||| ||| |||| Sbjct 2379241 TAGCATAGTCAGGGTGCTTTGTAGTCAAGGTTGCGGCTGTCTCAGCAGCCAAAGTATCCA 2379182 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||| || || || || || | || | |||||||| || ||||| Sbjct 2379181 GTTCCACTGTGGTGACTCCGCTGTACAGGCCTTGGATTACTTTCAT 2379136 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126 || |||||| ||||| |||||||| ||||||||||| || | || ||||| | || || Sbjct 2391265 CTCCACTCGCTTCATGAAGAGATCCGGAATCCAAAGTGCAAAGAAGAGATCCCGGGCTCG 2391206 Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186 || || || || ||||| ||||| || | || |||||| | | || || ||||||| Sbjct 2391205 CTGCTCTTCCTTCCCTGTGTTCTTCTTCAAGTCAAGGAACTCAAAGATGTCTAAATGCCA 2391146 Query 63187 CGGTTCCAAGTATATGGC 63204 || |||| ||| || || Sbjct 2391145 AGGCTCCAGGTAAATAGC 2391128 >seq61 Length=4506808 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 32685 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 32744 || || || || || | ||| || || || |||||||||||||| ||||| | ||| || Sbjct 586187 TCATCCCTGCTGATGAGTTCATTCGAGAAAGTGAGTCCGGGCATGAGGCCTCTCTTCTTC 586128 Query 32745 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 32804 ||||| || || | |||||||| ||||| ||||||| ||||| || || |||||||| Sbjct 586127 AGCCAGAAGATAGCAGCAAATGACCCAGAGAAGAAAACGCCTTCCACGGCAGCAAAGGCC 586068 Query 32805 ATAAGTCTCTCTCC 32818 | | |||||| || Sbjct 586067 ACCACTCTCTCCCC 586054 >seq7 Length=85103860 Score = 86.0 bits (94), Expect = 8e-12 Identities = 167/244 (68%), Gaps = 12/244 (5%) Strand=Plus/Minus Query 164812 TAGAGAATGAGATAGAAAAGCGTATCAGACGACTTCATGTTGTACATTTCTGTGAGAAAA 164871 |||||| ||| ||||| ||| | ||| ||| || | | | | || |||||||||||| Sbjct 15914822 TAGAGAGTGAAATAGAGAAGTGCATCCGACAGCTGCCTCTCGGTCACTTCTGTGAGAAAC 15914763 Query 164872 AAGAGGATATCAAATACGCATGTAGATTCATCAAGGTATATAAACCTGGGGAGGAGACTA 164931 ||||| | || || ||| |||| | ||||||| || | | ||| |||||| Sbjct 15914762 AAGAGAAGATAAAGTACACATGCAAATTCATCCCAGTCCACAGACC-----AGGAGATGT 15914708 Query 164932 CCTCGACATACGTGTGCGCTATCAAAGTGGAAAGATGTTGCTGTGCTGTGTT---TACAA 164988 | | |||| ||||| || ||| |||||| |||| |||||||||||||| | || Sbjct 15914707 GCGC-TCATATGTGTGTGCACTCAGAGTGGAGAGATTCTGCTGTGCTGTGTTCGCTGCAG 15914649 Query 164989 ATTGGCCAGAATCATGGTATATGGATACTAGTGGTATCAAGAAGTATTCTCCAGATGAAT 165048 | ||| || || ||| | |||| || || |||||| || | | |||| |||| Sbjct 15914648 A---GCCTGAGTCCTGGCACGTGGAAGACAGCTGTGTCAAGAGGTTTACCTCAGAGGAAT 15914592 Query 165049 GGGT 165052 |||| Sbjct 15914591 GGGT 15914588 >seq4671 Length=1285 Score = 84.2 bits (92), Expect = 3e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 32850 GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 32905 ||||| |||||||||||||| ||||||||||||||||| |||||||| |||||||| Sbjct 34 GCCCAGTCGGCCTTCTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATA 89 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633581824266000