Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20ochrogaster_20[refseq_20GCF_5F000317375.1_202012-12-07] 6,335 sequences; 2,287,340,943 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq67 95.1 2e-14 seq31 95.1 2e-14 seq92 93.3 9e-14 seq27 93.3 9e-14 seq15 93.3 9e-14 seq22 91.5 3e-13 seq7 91.5 3e-13 seq5 91.5 3e-13 seq145 89.7 1e-12 seq87 89.7 1e-12 seq59 89.7 1e-12 seq46 89.7 1e-12 seq41 89.7 1e-12 seq36 89.7 1e-12 seq18 89.7 1e-12 seq17 89.7 1e-12 seq14 89.7 1e-12 seq6 89.7 1e-12 seq4 89.7 1e-12 seq3 89.7 1e-12 seq1 89.7 1e-12 seq8 87.8 4e-12 seq127 86.0 1e-11 seq109 86.0 1e-11 seq26 86.0 1e-11 seq19 86.0 1e-11 seq13 86.0 1e-11 seq2 86.0 1e-11 seq12 84.2 4e-11 >seq67 Length=3888883 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 |||||||||||||||||||| |||||| ||||||||||||||| ||||| ||||||||| Sbjct 1963111 GTCTCTGTGGCGCAATGGACGAGCGCGCTGGACTTCTAATCCAGAGGTTCCGGGTTCGAG 1963052 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 1963051 TCCCGGCAGAGA 1963040 >seq31 Length=18700958 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 142499 AGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTT 142558 || |||||||| |||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 4393500 AGCTAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTT 4393441 Query 142559 CGAGCCCCACATCGGGC 142575 |||||||||| | |||| Sbjct 4393440 CGAGCCCCACGTTGGGC 4393424 >seq92 Length=2343062 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 1767660 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1767719 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 1767720 GCCCCACGTTGGGC 1767733 >seq27 Length=66490022 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 24681586 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 24681527 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 24681526 GCCCCACGTTGGGC 24681513 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 24681024 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 24681083 Query 142562 GCCCCACATCGGG 142574 ||||||| | ||| Sbjct 24681084 GCCCCACGTTGGG 24681096 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 37163481 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 37163422 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 37163421 CCCACGTTGGGC 37163410 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 59449926 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 59449985 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 59449986 CCCACGTTGGGC 59449997 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 10197545 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 10197604 Query 142564 CCCACATCGGG 142574 ||||| | ||| Sbjct 10197605 CCCACGTTGGG 10197615 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| | |||||||||||||| Sbjct 65971242 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGATCGTGGGTTCGAGC 65971301 Query 142564 CCCACATCGGGCA 142576 ||||| | ||||| Sbjct 65971302 CCCACGTTGGGCA 65971314 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||| || |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 6650063 AGCCTGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAAGGTCGTGGGTTCGAG 6650122 Query 142563 CCCCAC 142568 |||||| Sbjct 6650123 CCCCAC 6650128 >seq15 Length=35846924 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 35674013 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 35673954 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 35673953 GCCCCACGTTGGGC 35673940 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| || |||||||||| ||||||| ||||||||||||| |||||||||||||||| Sbjct 26889058 GCCTGGCTAGCTCAGTCAGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 26889117 Query 142564 CCCACATCGGGC 142575 ||||||| |||| Sbjct 26889118 CCCACATTGGGC 26889129 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/73 (88%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCT-AGTGGTCGTGGGTTCGAG 142562 |||| | |||||||||||||||||| ||||||||||||| ||| |||||||||||||| Sbjct 2049307 GCCCTGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGT-GTCGTGGGTTCGAG 2049365 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 2049366 CCCCACGTTGGGC 2049378 >seq22 Length=61813736 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| | Sbjct 52338570 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTTAGGGTCGTGGGTTCGGG 52338629 Query 142563 CCCCACATCGGGC 142575 |||||||| |||| Sbjct 52338630 CCCCACATTGGGC 52338642 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 ||||||||| |||||||||||||||||| ||||||||||||| ||| ||||||||| Sbjct 60685690 ATAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTTGTGGGTTCG 60685631 Query 142561 AGCCCCACATCGGGC 142575 |||||||| | |||| Sbjct 60685630 AGCCCCACGTTGGGC 60685616 >seq7 Length=85103860 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 4487817 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 4487876 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 4487877 CCCCACGTTGGGC 4487889 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4475222 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4475163 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 4475162 CCCACGTTGGGC 4475151 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4496833 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4496892 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 4496893 CCCACGTTGGGC 4496904 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4500867 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4500926 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 4500927 CCCACGTTGGGC 4500938 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4503497 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4503556 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 4503557 CCCACGTTGGGC 4503568 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 49826824 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 49826883 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 49826884 CCCACGTTGGGC 49826895 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 ||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 44463003 CCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCC 44463062 Query 142565 CCACATCGGGC 142575 |||| | |||| Sbjct 44463063 CCACGTTGGGC 44463073 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| ||||||||| |||||||| ||||||||||||| |||||||||||||||| Sbjct 1793050 GCCCGGCTAGCTCAGTTGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1792991 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1792990 CCCACGTTGGGC 1792979 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||| Sbjct 44462871 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCCTGGGTTCGAGC 44462930 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 44462931 CCCACGTTGGGC 44462942 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 63810718 GCCCGACTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 63810659 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 63810658 CCCACGTTGGGC 63810647 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 73450269 GCCCGGCTAGCTCAGTCGGTAGAACATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 73450210 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 73450209 CCCACGTTGGGC 73450198 >seq5 Length=88288230 Score = 91.5 bits (100), Expect = 3e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559 || ||||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 17337234 GAGAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 17337293 Query 142560 GAGCCCCACATCGGG 142574 ||||||||| | ||| Sbjct 17337294 GAGCCCCACGTTGGG 17337308 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 15826631 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 15826690 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 15826691 CCCACGTTGGGC 15826702 >seq145 Length=995324 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 987643 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 987702 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 987703 CCCACGTTGGGC 987714 >seq87 Length=2570995 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 1459413 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1459472 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 1459473 CCCACGTTGGGC 1459484 >seq59 Length=5088360 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 2155023 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAAGGTCGTGGGTTCGAGC 2154964 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 2154963 CCCACGTTGGGC 2154952 >seq46 Length=7398006 Score = 89.7 bits (98), Expect = 1e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||| Sbjct 3516835 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGATTCGAG 3516776 Query 142563 CCCCACATCGGGCAGAA 142579 |||||| | ||||| || Sbjct 3516775 CCCCACGTTGGGCACAA 3516759 >seq41 Length=9743299 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||| | |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 5622325 TAGCCCAGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 5622266 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 5622265 GCCCCACGTTGGGC 5622252 >seq36 Length=17971580 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 5635184 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 5635243 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 5635244 CCCACGTTGGGC 5635255 >seq18 Length=51076971 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 4558210 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 4558151 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 4558150 CCCACGTTGGGC 4558139 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 33520423 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 33520364 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 33520363 CCCACGTTGGGC 33520352 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 38711440 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 38711381 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 38711380 CCCACGTTGGGC 38711369 >seq17 Length=65020687 Score = 89.7 bits (98), Expect = 1e-12 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||| | |||||||||||||||||| ||||||||||||| ||||||||||| ||| Sbjct 18244039 AGCCCAGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTTGAG 18244098 Query 142563 CCCCACATCGGGCA 142576 |||||||| ||||| Sbjct 18244099 CCCCACATTGGGCA 18244112 Score = 87.8 bits (96), Expect = 4e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559 || ||||||| |||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 1380585 GAAAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTC 1380526 Query 142560 GAGCCCCACATCGGGC 142575 | ||||||| | |||| Sbjct 1380525 GTGCCCCACGTTGGGC 1380510 >seq14 Length=62639585 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 30148023 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 30148082 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 30148083 CCCACGTTGGGC 30148094 >seq6 Length=14361948 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| ||||||||| |||||||| ||||||||||||| |||||||||||||||| Sbjct 3895035 GCCCGGCTAGCTCAGTTGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 3895094 Query 142564 CCCACATCGGGC 142575 ||||||| |||| Sbjct 3895095 CCCACATTGGGC 3895106 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct 3119170 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTTGAGC 3119229 Query 142564 CCCACATCGGG 142574 ||||| | ||| Sbjct 3119230 CCCACGTTGGG 3119240 >seq4 Length=96435083 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 61382211 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 61382152 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 61382151 CCCACGTTGGGC 61382140 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||| Sbjct 1994771 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCATGGGTTCGAGC 1994830 Query 142564 CCCACATCGGGCA 142576 ||||| | ||||| Sbjct 1994831 CCCACGTTGGGCA 1994843 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 ||||| |||||||||||||||||| ||||||||||||| ||| ||||||||||||| Sbjct 54003904 CCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTTGTGGGTTCGAGCC 54003963 Query 142565 CCACATCGGGC 142575 |||| | |||| Sbjct 54003964 CCACGTTGGGC 54003974 >seq3 Length=92994323 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 18214294 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 18214353 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 18214354 CCCACGTTGGGC 18214365 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 76428666 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 76428725 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 76428726 CCCACGTTGGGC 76428737 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| || ||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 6767956 GCCCGGCTAACTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 6768015 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 6768016 CCCACGTTGGGC 6768027 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 91620413 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 91620354 Query 142563 CCCCA 142567 ||||| Sbjct 91620353 CCCCA 91620349 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/73 (86%), Gaps = 2/73 (3%) Strand=Plus/Minus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGC--GCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||| |||||||||||||||||| | ||||||||||||| ||||||||||||||| Sbjct 11951270 CCCGGCTAGCTCAGTCGGTAGAGCATGAGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 11951211 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 11951210 CCCCACGTTGGGC 11951198 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCACAT 142570 |||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct 62929780 TAGCTCAGTCAGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCCCCACAT 62929839 Query 142571 CGGGCA 142576 ||||| Sbjct 62929840 TGGGCA 62929845 >seq1 Length=126672627 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 12671896 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 12671955 Query 142563 CCCCACATCGGG 142574 |||||| | ||| Sbjct 12671956 CCCCACGTTGGG 12671967 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 21242773 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 21242714 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 21242713 CCCACGTTGGGC 21242702 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 44798498 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 44798557 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 44798558 CCCACGTTGGGC 44798569 >seq8 Length=88571779 Score = 87.8 bits (96), Expect = 4e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| ||||||||||| |||| Sbjct 45973994 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTTGAGC 45974053 Query 142564 CCCACATCGGG 142574 ||||||| ||| Sbjct 45974054 CCCACATTGGG 45974064 >seq127 Length=1300026 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 ||||| |||||||||||||||||| ||||||||||||| ||||||||||||| ||| Sbjct 834768 CCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGTGCC 834827 Query 142565 CCACATCGGGCA 142576 |||| | ||||| Sbjct 834828 CCACTTTGGGCA 834839 >seq109 Length=1860686 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 ||||| ||||||||||||||| || ||||||||||||| ||||||||||||||||| Sbjct 92945 CCCGGCTAGCTCAGTCGGTAGGGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCC 92886 Query 142565 CCACATCGGGCA 142576 |||| | ||||| Sbjct 92885 CCACGTTGGGCA 92874 >seq26 Length=66536344 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| || |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 66018892 GCCTGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 66018951 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 66018952 CCCACGTTGGGC 66018963 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| ||| |||||||||| Sbjct 18113978 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTTGTGGGTTCGA 18113919 Query 142562 GCCCCACATCGGGC 142575 |||||| | |||| Sbjct 18113918 GCCCCAGGTTGGGC 18113905 >seq19 Length=34839539 Score = 86.0 bits (94), Expect = 1e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 || |||||| |||||||||| ||||||| |||| |||||||| ||||||||||||| Sbjct 16718860 ATGGCCCGGCTAGCTCAGTCAGTAGAGCATGAGACGCTTAATCTCAGGGTCGTGGGTTCG 16718919 Query 142561 AGCCCCACATCGGGC 142575 |||||||||| |||| Sbjct 16718920 AGCCCCACATTGGGC 16718934 >seq13 Length=46045664 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||| ||||||||||| Sbjct 9197012 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCATGGGTTCGAGC 9196953 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 9196952 CCCACGTTGGGC 9196941 >seq2 Length=98408828 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| ||||||||||||| || Sbjct 89666587 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGTGC 89666528 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 89666527 CCCACGTTGGGC 89666516 >seq12 Length=15306438 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 13902563 TAGCCCGACTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGT 13902622 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 13902623 GCCCCACGTTGGGC 13902636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027753373377735