Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20ochrogaster_20[refseq_20GCF_5F000317375.1_202012-12-07] 6,335 sequences; 2,287,340,943 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq61 87.8 2e-12 >seq61 Length=4506808 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 126079 GATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAAT 126138 |||||||||||||||||| ||||| |||||||| || | |||||||| |||||| || Sbjct 586176 GATGAGTTCATTCGAGAAAGTGAGTCCGGGCATGAGGCCTCTCTTCTTCAGCCAGAAGAT 586117 Query 126139 CGCACAAAATGAACCCGAGAAGAAGATTCCCTCCAC 126174 ||| |||||| || |||||||| | || ||||| Sbjct 586116 AGCAGCAAATGACCCAGAGAAGAAAACGCCTTCCAC 586081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597306297061800