Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20ochrogaster_20[refseq_20GCF_5F000317375.1_202012-12-07] 6,335 sequences; 2,287,340,943 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq98 158 1e-32 seq14 158 1e-32 seq7 152 6e-31 seq18 116 5e-20 seq4 111 2e-18 seq42 98.7 1e-14 seq26 93.3 5e-13 seq87 89.7 6e-12 >seq98 Length=2230745 Score = 158 bits (174), Expect = 1e-32 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 1892390 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 1892331 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 1892330 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGAAGCCTCGACCGCGATGCGCTCGAAGA 1892271 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 1892270 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 1892211 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 1892210 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 1892174 Score = 158 bits (174), Expect = 1e-32 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 1917026 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 1916967 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 1916966 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGAAGCCTCGACCGCGATGCGCTCGAAGA 1916907 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 1916906 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 1916847 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 1916846 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 1916810 Score = 158 bits (174), Expect = 1e-32 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 2094588 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 2094529 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 2094528 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCTACGCCTCGCCCGCGATGCGCTCGAAGA 2094469 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2094468 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 2094409 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 2094408 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2094372 Score = 158 bits (174), Expect = 1e-32 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 2107504 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 2107445 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 2107444 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 2107385 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 2107384 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 2107325 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 2107324 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 2107288 Score = 152 bits (168), Expect = 6e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 1900937 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 1900996 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 1900997 TGGTCGAACGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 1901056 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 1901057 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 1901116 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 1901117 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 1901153 >seq14 Length=62639585 Score = 158 bits (174), Expect = 1e-32 Identities = 165/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 30306496 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 30306555 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 30306556 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGAAGCCTCGACCGCGATGCGCTCGAAGA 30306615 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 30306616 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 30306675 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 30306676 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 30306712 Score = 152 bits (168), Expect = 6e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||| ||||||||||| || | || Sbjct 30254443 GCTTGGCCAGCTCCCCGGGCAGCAGTAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 30254502 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 30254503 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 30254562 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 30254563 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 30254622 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 30254623 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 30254659 Score = 152 bits (168), Expect = 6e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 30294687 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 30294628 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 30294627 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 30294568 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 30294567 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 30294508 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| | ||||||||| | | || |||||| Sbjct 30294507 GGACCTGCTTCAACACCTTGTACACGTACACCGAGTA 30294471 Score = 152 bits (168), Expect = 6e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 30296223 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 30296282 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 30296283 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 30296342 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 30296343 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 30296402 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| | ||||||||| | | || |||||| Sbjct 30296403 GGACCTGCTTCAACACCTTGTACACGTACACCGAGTA 30296439 Score = 152 bits (168), Expect = 6e-31 Identities = 164/217 (76%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 30381947 GCTTGGCCAGCTCTCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 30381888 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | |||||||| || |||||| ||||||| |||| | Sbjct 30381887 TGGTCGAGCGCTTATTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGA 30381828 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 30381827 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 30381768 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 | |||||||| ||||||||||| | | || |||||| Sbjct 30381767 GGACCTGCTTCAGCACCTTGTACACGTACACCGAGTA 30381731 Score = 152 bits (168), Expect = 6e-31 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 30441059 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 30441000 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || | |||||||| || ||||||| ||||||| |||| | Sbjct 30440999 TGGTCGAGCGCTTTTTGTAATGCGCCAGGCGCGAGGCCTCGTCCGCGATGCGCTCGAAGA 30440940 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 30440939 TGTCGTTGACGAACGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 30440880 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 30440879 GGACCTGCTTCAGCACCTTGTA 30440858 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | |||||||||||| ||||||||||| || | || Sbjct 30627079 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 30627138 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | | | |||| || |||||| ||||||| |||| | Sbjct 30627139 TGGTCGAGCGCTTGTTGTAATCCTCCAGGCGCAACGCCTCGACCGCGATGCGCTCGAAGA 30627198 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||||| || ||||||| ||| | ||| |||||||| |||||||| Sbjct 30627199 TGTCTGTCACAAAGGAATTCATGATGCCCATGGCCTTCGAAGAGATGCCAGTGTCGGGGT 30627258 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||| |||||||| |||||| Sbjct 30627259 GGACCTGCTTCAGCACCTTATAGATG 30627284 >seq7 Length=85103860 Score = 152 bits (168), Expect = 6e-31 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| | ||| |||||||| ||||| | |||||| | || Sbjct 39684742 GCTTGGCCAGTTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGCACCTCGCGGGACGTGA 39684683 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| ||| ||||||| || ||||||| |||| | Sbjct 39684682 TGGTCGAACGCTTGTTGTAATGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAAA 39684623 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| ||||||||||||| ||| | ||| |||||||| |||||||| Sbjct 39684622 TATCGTTGACGAACGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCAGTGTCGGGGT 39684563 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 39684562 GCACCTGCTTCAGCACCTTGTA 39684541 Score = 152 bits (168), Expect = 6e-31 Identities = 155/202 (77%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| ||| ||| | ||| |||||||| ||||| | |||||| | || Sbjct 39689010 GCTTGGCCAGTTCCCCGGGCAGCAGCAGACGCACGGCCGTCTGCACCTCGCGGGACGTGA 39689069 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | |||||||| ||| ||||||| || ||||||| |||| | Sbjct 39689070 TGGTCGAACGCTTGTTGTAATGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAAA 39689129 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | |||||||| ||||||||||||| ||| | ||| |||||||| |||||||| Sbjct 39689130 TATCGTTGACGAACGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCAGTGTCGGGGT 39689189 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 39689190 GCACCTGCTTCAGCACCTTGTA 39689211 >seq18 Length=51076971 Score = 116 bits (128), Expect = 5e-20 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| ||||| ||| | |||||||||||| ||||||||||| || | ||| || Sbjct 2259618 GCCAGCTCGCCCGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTC 2259677 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 |||||||| | |||||||| || || ||| ||||||| |||| ||||| Sbjct 2259678 GAACGCTTGTTGTAATGCGCCAGGCGCGAAGCTTCGCCTGCGATGCGTTCGAAGATGTCA 2259737 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||||| |||||||||| ||| | |||| || ||||| ||||||||||||| Sbjct 2259738 CTGACAAAAGAGTTCATGATGCCCATGGCCTTGGACGAAATGCCGGTGTCGGGGTGCACC 2259797 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| | ||| ||||| Sbjct 2259798 TGCTTCAACACTTTGTA 2259814 Score = 107 bits (118), Expect = 2e-17 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 |||||||||||| ||||||||||| || | ||| || |||||||| | ||||| Sbjct 2201371 CAGGCGCACGGCCGTCTGGATCTCCCGGGAAGTGATGGTCGAACGCTTGTTGTAATGCGC 2201430 Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 || ||| |||||| ||||||| |||| |||||||| || || |||||||||| Sbjct 2201431 CAAGCGGGAAGCCTCGCCAGCGATGCGCTCGAAGATGTCGTTCACGAAGGAGTTCATGAT 2201490 Query 1254488 CGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | ||| || |||||| ||| || ||||| ||||| ||||||||||| Sbjct 2201491 GCCCATGGCTTTGGACGAAATGCCCGTGTCCGGATGCACTTGCTTCAGCACCTTGTA 2201547 >seq4 Length=96435083 Score = 111 bits (122), Expect = 2e-18 Identities = 205/301 (68%), Gaps = 0/301 (0%) Strand=Plus/Plus Query 869639 ATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCC 869698 ||||| || ||||| || |||||||| || || | |||||| || || || || Sbjct 65464513 ATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACCTGAACTTCT 65464572 Query 869699 TTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCC 869758 | |||| || | ||||||| || || ||||| || || || || || |||||| Sbjct 65464573 TGGCTGAAGCGCTCCACCAGGTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGCC 65464632 Query 869759 AGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACGGTGTCG 869818 |||||||| ||||| || | ||||||| | |||| ||||||| | || Sbjct 65464633 AGGACGTGAGATATAAAATGTCTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGAATATCC 65464692 Query 869819 GCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCC 869878 | |||||| |||||||| || ||||||| || |||||||| || |||||||||| | Sbjct 65464693 TTGGAGAGGTCGACCTCCTCAGCCGTCCAGAAGGAAGCCTCGGCTTTCTTGTACATCTGC 65464752 Query 869879 CATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGG 869938 || | | ||||| ||| || |||| || ||| || ||| || || | || ||| Sbjct 65464753 CAGATATCATGGTATTCGATGGGAAAGACCACGAAGTGGCGGGGATTTTCTCTCAGAAGG 65464812 Query 869939 G 869939 | Sbjct 65464813 G 65464813 >seq42 Length=9663327 Score = 98.7 bits (108), Expect = 1e-14 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 869715 CCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGATAA 869774 ||||||| || || ||||| || || || || || |||||||||||||| |||| Sbjct 3434566 CCAGGTTTTCATTGACTATGCCATCACTAGCCGCAAAGAAAGCCAGGACGTGAGATATAA 3434507 Query 869775 AGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACGGTGTCGGCGCTGAGGTCCACCT 869834 | || | ||||||| | |||| ||||||| | || | |||||| |||| Sbjct 3434506 AATGTCTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGAATATCCTTGGAGAGGTCGACCT 3434447 Query 869835 CCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTGGTAGC 869894 |||| || ||||||| || |||||||| || |||||||||| ||| | | ||||| Sbjct 3434446 CCTCAGCCGTCCAGAAGGAAGCCTCGGCTTTCTTGTACATCTGCCAGATATCATGGTATT 3434387 Query 869895 GGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 ||| || |||| || |||||| ||| || || Sbjct 3434386 CGATGGGAAAGACCACGAAGCGGCGGGGATTTTC 3434353 >seq26 Length=66536344 Score = 93.3 bits (102), Expect = 5e-13 Identities = 188/279 (67%), Gaps = 0/279 (0%) Strand=Plus/Plus Query 869640 TGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCT 869699 |||| || ||||| || |||||||| || || | |||||| || || || || | Sbjct 31519724 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACCTGAACTTCTT 31519783 Query 869700 TCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCA 869759 | || || | ||||||| || || ||||| || ||||| || || ||||||| Sbjct 31519784 GGCTAAAGCGCTCCACCAGGTTTTCATTGACTATGCCATCACTGGCTGCAAAGAAAGCCA 31519843 Query 869760 GGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACGGTGTCGG 869819 ||||||| ||||| || | |||||| | |||| || |||| | || Sbjct 31519844 GGACGTGAGATATAAAATGTCTCTCGTCAGGTTTCAGCGCTTCCTAGTGTTGAATATCCT 31519903 Query 869820 CGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCC 869879 | |||||||||||| || || ||||||| |||||||||| || |||||||||| || Sbjct 31519904 TGGAGAGGTCCACCTCGTCAGCTGTCCAGAAGAAGGCCTCGGCTTTCTTGTACATCTGCC 31519963 Query 869880 ATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGT 869918 | | | ||||| || || |||| || ||| ||| Sbjct 31519964 AGATATCATGGTATTCAATGGGAAAGACAACGAAGTGGT 31520002 >seq87 Length=2570995 Score = 89.7 bits (98), Expect = 6e-12 Identities = 198/296 (67%), Gaps = 1/296 (0%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || || ||||| || ||||| || |||||||| || || || |||||| || || Sbjct 1819418 GAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCTGGCCTCTGTAACCTGA 1819477 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || | | || | || |||| || || || | || || || | | || Sbjct 1819478 ACTTCTTGGCTAAAGCACTCGACCAGATTTTCATTGACTAATCCATCACTCGTCACAAAG 1819537 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 |||||||||||||| ||||| || | ||||||| | |||| ||||||| Sbjct 1819538 AAAGCCAGGACGTGGGATATAAAATGTCTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGA 1819597 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 | || | ||||||||||||||| || |||||| ||||||||||| || |||||| Sbjct 1819598 ATATCCTTGGAGAGGTCCACCTCCTCAGCCATCCAGAAGGAGGCCTCGGCTTTCTTGTAC 1819657 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 ||| ||| | | ||||| |||||| |||| | |||||| ||| || || Sbjct 1819658 -TCTGCCAGATATCATGGTACTCGATAGGAAAGACAAGGAAGCGGCGGGGATTTTC 1819712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106619320233195