Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20ochrogaster_20[refseq_20GCF_5F000317375.1_202012-12-07] 6,335 sequences; 2,287,340,943 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq4 316 2e-81 seq26 255 5e-63 seq87 187 2e-42 seq42 154 1e-32 seq9 134 1e-26 seq46 95.1 1e-14 seq4671 93.3 3e-14 seq8 89.7 4e-13 seq13 86.0 5e-12 >seq4 Length=96435083 Score = 316 bits (350), Expect = 2e-81 Identities = 615/897 (69%), Gaps = 16/897 (2%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 || || || ||||| || |||| ||||| || ||||| |||||||| ||||| |||| Sbjct 65464787 TTCGTGGTCTTTCCCATCGAATACCATGATATCTGGCAGATGTACAAGAAAGCCGAGGCT 65464728 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTA 43819 || || ||||| || || || || || | | || || | ||| ||| || | Sbjct 65464727 TCCTTCTGGACGGCTGAGGAGGTCGACCTCTCCAAGGATATTCAACACTGGGAAGCGCTG 65464668 Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879 ||||| | || | ||||||||||||| || |||| || ||||||||||| || || Sbjct 65464667 AAACCCGACGAGAGACATTTTATATCTCACGTCCTGGCTTTCTTTGCTGCGAGTGATGGC 65464608 Query 43880 ATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGA 43939 |||||||||||||| |||| || || ||||||||||| | |||| || || Sbjct 65464607 ATAGTCAATGAAAACCTGGTGGAGCGCTTCAGCCAAGAAGTTCAGGTTACAGAGGCCCGC 65464548 Query 43940 TGTTTTTATGGGTTTCAAATTGCCATAGAAAATAT-TCATTCGGAAATGTACAGTCTTCT 43998 ||||| ||||| || ||||||||||| ||||| || ||||| |||||||||||||| || Sbjct 65464547 TGTTTCTATGGCTTCCAAATTGCCATGGAAAACATAACATTCTGAAATGTACAGTCTCCT 65464488 Query 43999 GATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAAC 44058 || ||||| ||||| |||||| | |||| | | | || ||||| || || || Sbjct 65464487 CATCGATACTTACATTAAAGATTCCAAAGAGAGGGAATATCTCTTCAATGCTATTGAGAC 65464428 Query 44059 AGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT----AAATTCAAATG 44114 | | ||| | ||| | || || ||||||||||| ||||| | | | | Sbjct 65464427 AATGCCTTGTGTGAAAAAGAAGGCCGACTGGGCCCTGCGTTGGATTGGGGGACAAAGAAG 65464368 Query 44115 ATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGAT 44174 | | | |||||||||| |||| || ||||| | ||||||||| || |||| || || | Sbjct 65464367 CTACCTATGGAGAACGAGTTGTGGCCTTTGCTGCTGTGGAAGGGATCCTCTTCTCTGGCT 65464308 Query 44175 CGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAA 44234 | |||| | | ||||| ||| | |||||||| || |||||||||| | |||||||| | Sbjct 65464307 CCTTTGTGTCAATATTCTGGCTCAAGAAACGGGGACTGATGCCTGGCCTTACGTTTTCCA 65464248 Query 44235 ATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGAT 44294 | ||| | || || | ||||| || ||||| || ||||| ||| || | | | Sbjct 65464247 ACGAGCTTATTAGCAGAGATGAGGGTTTACACTGTTGCTTTGCCTGCCTGATGTTCAGGC 65464188 Query 44295 ATCTAGGAGACGATAAGCCTTCATGTAAGACA-ATTAC-AGATATTGTTGTAGAGGCAGT 44352 | || | | || ||||| | | | | | | ||| ||| || || | | ||||| Sbjct 65464187 ACCTGGTACAC---AAGCCGCC--GGAGCAAAGAGTACAAGAAATCATTATCAACGCAGT 65464133 Query 44353 AAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TG 44411 | | |||| || || ||| | || || | ||||| || | || || ||||| || Sbjct 65464132 GAGGCTAGAGCAGGAGTTTCTCACGGAGGCCCTGCCTGTGAAGCTCATCGGGATGAACTG 65464073 Query 44412 AACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTT 44471 | ||||||| || || || |||| | | || || | | | |||| || || | Sbjct 65464072 CGC-CCTGATGAAGCAGTACATCGAATTCGTGGCGGACAGGCTTATGCTGGAGCTAGGGT 65464014 Query 44472 GCGATAAACACTAT-ATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAA 44530 | | || | | | | ||| |||| || ||||| || |||||||||||||| | ||| Sbjct 65464013 TC-AGCAAGATTTTCAAAGTAGAAAATCCATTTGACTTCATGGAAAATATTTCACTAGAA 65463955 Query 44531 GGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 || || |||||||| ||||| || || || || || |||||| | ||||| || ||| Sbjct 65463954 GGAAAGACAAACTTCTTTGAGAAGCGAGTGGGCGAGTATCAGAGGATGGGGGTGATG 65463898 >seq26 Length=66536344 Score = 255 bits (282), Expect = 5e-63 Identities = 592/886 (67%), Gaps = 15/886 (2%) Strand=Plus/Minus Query 43700 TTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCG 43759 || || || ||||| ||| |||| ||||| || ||||| |||||||| ||||| |||| Sbjct 31519997 TTCGTTGTCTTTCCCATTGAATACCATGATATCTGGCAGATGTACAAGAAAGCCGAGGCC 31519938 Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTA 43819 | || |||||||| || || || || | | || || | ||| | | || | Sbjct 31519937 TTCTTCTGGACAGCTGACGAGGTGGACCTCTCCAAGGATATTCAACACTAGGAAGCGCTG 31519878 Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879 ||||| | || | ||||||||||||| || |||| || ||||| || || || || Sbjct 31519877 AAACCTGACGAGAGACATTTTATATCTCACGTCCTGGCTTTCTTTGCAGCCAGTGATGGC 31519818 Query 43880 ATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGA 43939 |||||||||||||| |||| || ||| ||||||||||| | |||| || || Sbjct 31519817 ATAGTCAATGAAAACCTGGTGGAGCGCTTTAGCCAAGAAGTTCAGGTTACAGAGGCCCGC 31519758 Query 43940 TGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTG 43999 ||||| ||||| || ||||||||||| ||||| | ||||| |||||||||||||| || Sbjct 31519757 TGTTTCTATGGCTTCCAAATTGCCATGGAAAACAAACATTCTGAAATGTACAGTCTCCTC 31519698 Query 44000 ATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACA 44059 || || |||| |||||| | |||| | | | || ||||| || || ||| Sbjct 31519697 ATTGA----CACATTAAAGATTCCAAAGAGAGGGAATATCTCTTCAATGCTATTGAGACA 31519642 Query 44060 GTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT----AAATTCAAATGA 44115 | ||| | ||| | | || ||||||||||| ||||| | | ||| Sbjct 31519641 ATGCCTTGTGTGAAAAAGTAGGCTGACTGGGCCCTGCGTTGGATTTGGAGACAAAAAGAC 31519582 Query 44116 TTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATC 44175 | | | ||||||| || |||| || ||||| | ||| |||| ||| ||||| || || || Sbjct 31519581 TACCTATGGAGAAAGAGTTGTGGCCTTTGCTGCTGTAGAAGACATCTTCTTCTCTGGCTC 31519522 Query 44176 GTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAA 44235 |||||| | ||||| ||| | ||||||| || |||||||||| | || ||||| || Sbjct 31519521 TTTTGCGTCAATATTCTGGCTCAAGAAACAGGGACTGATGCCTGGCCTTACATTTTCCAA 31519462 Query 44236 TGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATA 44295 ||| | || || | ||||| | ||||| || | ||||| ||| || | | | | Sbjct 31519461 AGAGCTTATTAGCAGAGATGAGCGTTTACACTGTGGCTTTGCCTGCCTGATGTTCAGGCA 31519402 Query 44296 TCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAGATATTGTTGTAGAGGCAGTAAA 44355 || | | | ||||| || | | | | ||| || || | | ||||| | Sbjct 31519401 CCTGGTAAGC---AAGCCGCCAGAGCAAAGAGTACAAGAAATCATTATCAACGCAGTGAG 31519345 Query 44356 GATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGAAC 44414 |||| | || | ||| | || || | ||||| || | || | ||||| || || Sbjct 31519344 GATAAAGCAGGTGTTTCTCACGGAGGCCCTGCCTGTGAAGCTCATCAGGATGAACTGCAC 31519285 Query 44415 TTTTGATGAACCAATATATTGAATACATTGCAGA-TCGTTTACTTTTGGAACTGGGTTGC 44473 | ||||| | || || |||| | | || || || ||| | |||| || || | | Sbjct 31519284 -CCTCATGAAGCGGTACATCGAATTCGTGGCCGACACGCTTA-TGCTGGAGCTAGGGTTC 31519227 Query 44474 GATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGC 44533 || | | ||| |||| || ||||| || ||||||||||||| | ||||| Sbjct 31519226 AGCAAGATTTCCAAAGTAGAAAATCCTTTTGACTTCGTGGAAAATATTTCACTAGAAGGG 31519167 Query 44534 AAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGG 44579 || |||||||| |||| || || || || || |||||| | |||| Sbjct 31519166 AAGACAAACTTCCTTGAGAAGCGAGTGGGTGAGTATCAGAGGATGG 31519121 Score = 214 bits (236), Expect = 1e-50 Identities = 460/687 (67%), Gaps = 8/687 (1%) Strand=Plus/Minus Query 40671 AGATACAATTTGAGAAATCAGTTTCCGTTGCTAACTACaaaaaaaaTGTTTTGGAAAGGC 40730 |||||||| ||||| || | ||||| |||| || || ||| | |||| ||||| ||| Sbjct 25930123 AGATACAACCTGAGAGATGAATTTCCTCTGCTCACAACCAAACGAGTGTTCTGGAAGGGC 25930064 Query 40731 ATTGCAGAAGAACTGTTATGGTTTATCAAAGGTTGTACTAATGCTAAGAAATTATCAGAA 40790 || || ||| || | ||||||||||| || | || |||||||| || | || Sbjct 25930063 GTTTTGGAGGAATTGCTGTGGTTTATCAAGGGATCCACAAATGCTAAAGAACTGTCCTCC 25930004 Query 40791 AGAGGAGTGCACATTTGGAATGCGCACAGTTCTAAAACATATTTGTCTAGCATAGGATTA 40850 | ||||||| || ||| |||| | | || | | | || ||| | ||||| Sbjct 25930003 AAAGGAGTGAGAATCTGGGATGCCAATGGGTCCCGAGATTTTCTGGACAGCCTGGGATTC 25929944 Query 40851 ----CAAGATAGGGATGAAGGTGATCTTGGTCCTGTTTATGGATTTCAGTCGCGACATTT 40906 || || ||| |||| ||||| || || |||||||| || |||| | ||||||| Sbjct 25929943 TCTGCACGACAGG----AAGGGGATCTGGGCCCAGTTTATGGTTTCCAGTGGAGACATTT 25929888 Query 40907 TGGAGCAAAATATGACACTATGTACTCTGATTATACCAATAAAGGAATGGATCAATTACA 40966 ||| ||| | || | |||| | || ||||| | | ||||| | || || | || Sbjct 25929887 TGGCGCAGACTACAAAGATATGGAATCAGATTACTCGGGTCAAGGAGTAGACCAGCTGCA 25929828 Query 40967 GTGCGTTATAGATACGATTAAATCCGATCCCGATAGCCGACGTATAATATTGTGCGCGTG 41026 || || || || || ||| || || ||| | || | || || |||| || || Sbjct 25929827 AAAAGTGATTGACACCATCAAAACCAGCCCTGATGACAGAAGAATCATCATGTGTGCCTG 25929768 Query 41027 GAACCCAACGGACGTACATTTGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTA 41086 |||||||| || | | |||||||| |||| ||||| ||| | ||||| || || Sbjct 25929767 GAACCCAAAAGATCTTCCCCTGATGGCACTGCCTCCTTGCCATGCCCTCTGTCAATTCTA 25929708 Query 41087 CGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGG 41146 || ||||| || ||||| || || | || || || || || || ||||| || || Sbjct 25929707 TGTAGCGAATGGGGAGCTGTCTTGCCAGCTCTACCAGAGGTCGGGAGATATGGGCCTGGG 25929648 Query 41147 GGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGATTGCACACGTTACCAA 41206 || || || ||||| || || ||||| ||||| || || |||||||||||| || Sbjct 25929647 TGTGCCCTTCAACATTGCCAGCTATGCCCTGCTTACCTACATGATTGCACACACCACAGG 25929588 Query 41207 TTTAAAACCTGGTGAATTTGTTCACACGTTAGGAGATGGACATATTTACATTAATCACAT 41266 |||| || || || ||||| ||||| || ||||||| |||||||||| | ||||| || Sbjct 25929587 CCTAAAGCCAGGGGATTTTGTCCACACCTTGGGAGATGCACATATTTACCTGAATCATAT 25929528 Query 41267 AGAGCCGTTAACAGAACAACTGACACGAAAACCTAGACCATTTCCAACGCTACTTATTAA 41326 ||||| | | | || || ||| | || ||||| || |||| ||| ||| Sbjct 25929527 CGAGCCCCTGAAAATTCAGCTTCAGCGAGAGCCAAGACCTTTCCCAAAGCTCAAAATTCT 25929468 Query 41327 ACGCGCTGTTGAAAACATTGATGATTT 41353 || ||||| | ||||||||||| Sbjct 25929467 TCGAAAAGTTGAGACAATTGATGATTT 25929441 >seq87 Length=2570995 Score = 187 bits (206), Expect = 2e-42 Identities = 342/494 (69%), Gaps = 8/494 (2%) Strand=Plus/Minus Query 43706 GTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTT 43765 || ||||| || | || ||||| || ||||| | |||||| ||||| |||| || || Sbjct 1819691 GTCTTTCCTATCGAGTACCATGATATCTGGCAGA-GTACAAGAAAGCCGAGGCCTCCTTC 1819633 Query 43766 TGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCA 43825 |||| || || || || || | | || || | ||| ||| || | ||||| Sbjct 1819632 TGGATGGCTGAGGAGGTGGACCTCTCCAAGGATATTCAACACTGGGAAGCGCTGAAACCC 1819573 Query 43826 CAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTC 43885 | || | |||||||||||| || |||| || |||| |||| || || ||||| Sbjct 1819572 GACGAGAGACATTTTATATCCCACGTCCTGGCTTTCTTTGTGACGAGTGATGGATTAGTC 1819513 Query 43886 AATGAAAATTTGGTT-AGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTT 43944 ||||||||| |||| ||| || || ||||||||||| | |||| || | ||||| Sbjct 1819512 AATGAAAATCTGGTCGAGTGCTTTAGC-CAAGAAGTTCAGGTTACAGAGGCCAGCTGTTT 1819454 Query 43945 TTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGA 44004 ||||| || ||||||||||| ||||| || ||||| |||||||||||||| || || | Sbjct 1819453 CTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTACAGTCTCCTCATTGT 1819394 Query 44005 TACGTACATCAAAGATGGGCACGAGA-AGCATCGATTGTTTAATGCGATAGAAACAGTAC 44063 || ||||| |||||| | |||| | || ||| | ||||| || || ||| | | Sbjct 1819393 CACCTACATTAAAGATTCCAAAGAGAGGGAATATCTTG-TCAATGCTATTGAGACAATGC 1819335 Query 44064 CTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT---AAATTCAAATGATTCTT 44120 || | ||| | || || |||||| || | | ||||| | | ||| | | | Sbjct 1819334 CTTGTGTGAAAAAGAAGGCCGACTGGACCGTGCATTGGATTGGGGACAAAGATGCTACCT 1819275 Query 44121 TTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTG 44180 |||||||||| |||| | ||||| | ||| ||||| || ||||| || || || |||| Sbjct 1819274 ATGGAGAACGAGTTGTGACCTTTGCTGCTGTAGAAGGGATCTTCTTCTCTGGCTCTTTTG 1819215 Query 44181 CGGCCATATTTTGG 44194 | | ||||| ||| Sbjct 1819214 TGTCAATATTCTGG 1819201 >seq42 Length=9663327 Score = 154 bits (170), Expect = 1e-32 Identities = 329/481 (68%), Gaps = 13/481 (3%) Strand=Plus/Plus Query 44113 TGATTCTT--TTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCA 44170 ||| |||| | ||||||||| |||| || ||||| | ||||||||| || ||||| || Sbjct 3435628 TGACTCTTGCTAGGAGAACGAGTTGTGGCCTTTGCTGCTGTGGAAGGGATCTTCTTCTCT 3435687 Query 44171 GGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTT 44230 || || |||||| | ||||| ||| | |||||||| || |||||||||| | |||||| Sbjct 3435688 GGCTCTTTTGCGTCAATATTCTGGCTCAAGAAACGGGGACTGATGCCTGGCCTTACGTTT 3435747 Query 44231 TCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTT 44290 || || ||| | || || | ||||| || ||||| || || ||||| ||| || | | Sbjct 3435748 TCCAACGAGCTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTC 3435807 Query 44291 GGATATCTAGGAGACGATAAGCCTTCATGTAAGACA-ATTACA-GATATTGTTGTAGAGG 44348 | | || | | || ||||| | | | | | | |||| || || || | | | Sbjct 3435808 AGGCACCTGGTACAC---AAGCCGCC--GGAGCAAAGAGTACAAGAAATCATTATCAACG 3435862 Query 44349 CAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGA 44408 | | | |||||| || || ||| | || || | ||||| || | || || || | Sbjct 3435863 CCTTGAGGATAGAGCAGGAGTTTCTCACGGAGGCCCTGCCTGTGAAGCTCATCGGGATAA 3435922 Query 44409 A-TGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTG 44467 || || | |||||| || || || |||| | | || || | | | |||| || Sbjct 3435923 GCTGCACCCT-GATGAAGCACTACATCGAATTCGTGGCGGACAGGCTTATGCTGGAGCTA 3435981 Query 44468 GGTTGCGATAAACACTAT-ATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTT 44526 || | | | || | | | | ||| |||| |||||||| | |||||||||||||| | Sbjct 3435982 GGATTC-AGCAAGATTTTCAAAGTAGAAAATCCGTTTGACTCCATGGAAAATATTTCACT 3436040 Query 44527 GGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCAT 44586 ||||| || |||||||| ||||| || ||||| || | |||||| | ||||| || || Sbjct 3436041 AGAAGGGAAGACAAACTTCTTTGAGAAGCGCGTGGGCAAGTATCAGAGGATGGGGGTGAT 3436100 Query 44587 G 44587 | Sbjct 3436101 G 3436101 Score = 120 bits (132), Expect = 2e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 43913 CAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAAT 43972 ||||||||||| | |||| || || ||||| ||||| || ||||||||||| ||||| Sbjct 3435299 CAAGAAGTTCAGGTTACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAAC 3435358 Query 43973 ATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAG 44032 || ||||| |||||||||||||| || || ||||| ||||| |||||| | |||| | Sbjct 3435359 ATACATTCTGAAATGTACAGTCTCCTCATCGATACTTACATTAAAGATTCCAAAGAGAGG 3435418 Query 44033 CATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCC 44092 | | || ||||| || || ||| | ||| | ||| | || || ||||||||| Sbjct 3435419 GAATATCTCTTCAATGCTATTGAGACAATGCCTTGTGTGAAAAAGAAGGCCGACTGGGCC 3435478 Query 44093 CTTAAATGGAT 44103 ||| ||||| Sbjct 3435479 CTTCGTTGGAT 3435489 Score = 111 bits (122), Expect = 1e-19 Identities = 134/181 (74%), Gaps = 1/181 (1%) Strand=Plus/Plus Query 43923 AATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGG 43982 |||||| ||| || || ||||| ||||| || ||||||||||| ||||| || ||||| | Sbjct 3436196 AATTAC-AGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTG 3436254 Query 43983 AAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGT 44042 ||||||||||||| || || ||||| ||||| |||||| | |||| | | | | Sbjct 3436255 AAATGTACAGTCTCCTCATCGATACTTACATTAAAGATTCCAAAGAGAGGGAATATCTCT 3436314 Query 44043 TTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGA 44102 | ||||| || || ||| | ||| | ||| | || || |||||||||||| |||| Sbjct 3436315 TCAATGCTATTGAGACAATGCCTTGTGTGAAAAAGAAGGCCGACTGGGCCCTTCGTTGGA 3436374 Query 44103 T 44103 | Sbjct 3436375 T 3436375 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 43676 TTGCTTACAGAAAATCCGTCTAGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGG 43735 || || | ||||||||| | || || || ||||| || |||| ||||| || ||| Sbjct 3434344 TTACTGAGAGAAAATCCCCGCCGCTTCGTGGTCTTTCCCATCGAATACCATGATATCTGG 3434403 Query 43736 CAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAA 43795 || |||||||| ||||| |||| || || ||||| || || || || || | | || Sbjct 3434404 CAGATGTACAAGAAAGCCGAGGCTTCCTTCTGGACGGCTGAGGAGGTCGACCTCTCCAAG 3434463 Query 43796 GACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTG 43855 || | ||| ||| || | ||||| | || | ||||||||||||| || || Sbjct 3434464 GATATTCAACACTGGGAAGCGCTGAAACCCGACGAGAGACATTTTATATCTCACGTCCTG 3434523 Query 43856 GCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTC 43904 || || ||||| || || || || |||||||||||||| |||| |||| Sbjct 3434524 GCTTTCTTTGCGGCTAGTGATGGCATAGTCAATGAAAACCTGGTGAGTC 3434572 Score = 89.7 bits (98), Expect = 4e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 44489 GTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTT 44548 ||| |||| |||||||| || |||||||||||||| | ||||| || |||||||| ||| Sbjct 3438498 GTAGAAAATCCGTTTGACTTCATGGAAAATATTTCACTAGAAGGGAAGACAAACTTCTTT 3438557 Query 44549 GAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 || || || || || || |||||| | ||||| || ||| Sbjct 3438558 GAGAAGCGAGTGGGCGAGTATCAGAGGATGGGGGTGATG 3438596 >seq9 Length=86001432 Score = 134 bits (148), Expect = 1e-26 Identities = 318/470 (68%), Gaps = 14/470 (3%) Strand=Plus/Minus Query 44122 TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGC 44181 |||||||||| |||| || ||||| | | ||||||| || |||| | || || ||||| Sbjct 36370202 TGGAGAACGAGTTGTGGCCTTTGCTGCTATGGAAGGGATCTTCTCT---GGCTCTTTTGC 36370146 Query 44182 GGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTT 44241 | | ||||| ||| | | ||||| || |||||||||| | |||||||| || ||| | Sbjct 36370145 GTCAATATTCTGGCTCAGGAAACTGGGACTGATGCCTGGCCTTACGTTTTCCAACGAGCT 36370086 Query 44242 AATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCTAGG 44301 || || | ||||| || ||||| || || ||||| ||| || | | | | || | Sbjct 36370085 TATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAGGCACCTGGT 36370026 Query 44302 AGACGATAAGCCTTCATGTAAGACA-ATTACA-GATATTGTTGTAGAGGCAGTAAAGATA 44359 | || ||||| | | | | | | |||| || || | | | ||||| | |||| Sbjct 36370025 ACAC---AAGCCGCC--GGAGCAAAGAGTACAAGAAATCATCATCAACGCAGTGAGGATA 36369971 Query 44360 GAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGAATGAA-TGAACTTTT 44418 || || || ||| | || || | ||||| || | || || || | || || | Sbjct 36369970 GAGCAGGAGTTTCTCACGGAGGCCCTGCCTGTGAAGCTCATCGGGATAAGCTGCACCCT- 36369912 Query 44419 GATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAACTGGGTTGCGATAA 44478 |||||| || || || |||| | | || || | | | |||| || || | | | | Sbjct 36369911 GATGAAGCACTACATCGAATTCGTGGCGGACAGGCTTATGCTGGAGCTAGGATTC-AGCA 36369853 Query 44479 ACACTAT-ATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAA 44537 | | | | | ||| |||| |||||||| | |||||||||||||| | ||||| || | Sbjct 36369852 AGATTTTCAAAGTAGAAAATCCGTTTGACTCCATGGAAAATATTTCACTAGAAGGGAAGA 36369793 Query 44538 CAAACTTTTTTGAAAAACGCGTTGGAGAATATCAGCGAATGGGCGTCATG 44587 ||||||| ||||| || ||||| || | |||||| | ||||| || ||| Sbjct 36369792 CAAACTTCTTTGAGAAGCGCGTGGGCAAGTATCAGAGGATGGGGGTGATG 36369743 >seq46 Length=7398006 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 |||||||| |||| ||||| ||| | ||||| || || || ||||| || |||| Sbjct 7346868 TGATGGCACTGCCCCCTTGCCATGCCCTCTGTCAATTCTATGTAGTGAATGGGGAGCTGT 7346809 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || | || || || ||||| || ||||| || || || || || ||||| || | Sbjct 7346808 CTTGCCAGCTCTACCAGAGGTCAGGAGATATGGGCCTGGGCGTGCCCTTCAACATTGCCA 7346749 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198 ||||| |||||||| || |||||||||||| Sbjct 7346748 TCTATGCCCTGCTCACCTACATGATTGCACAC 7346717 >seq4671 Length=1285 Score = 93.3 bits (102), Expect = 3e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 43940 TGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTG 43999 ||||| ||||| || ||||||||||| ||||| || ||||| |||||||||||||| || Sbjct 1283 TGTTTCTATGGCTTCCAAATTGCCATGGAAAACATACATTCTGAAATGTACAGTCTCCTC 1224 Query 44000 ATAGATACGTACATCAAAGAT 44020 || ||||| ||||| |||||| Sbjct 1223 ATCGATACTTACATTAAAGAT 1203 >seq8 Length=88571779 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 |||||||| |||| ||||| ||| | ||||| || || || ||||| || |||| Sbjct 15943043 TGATGGCACTGCCTCCTTGCCATGCCCTCTGTCAATTCTATGTAGCGAATGGGGAGCTGT 15942984 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || | || || || || || || ||||| || || || || || ||||| || | Sbjct 15942983 CCTGCCAGCTCTACCAGAGGTCGGGAGATATGGGCCTGGGTGTGCCCTTCAACATTGCCA 15942924 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198 | ||||| ||||| || || |||||||||||| Sbjct 15942923 GCTATGCCCTGCTTACCTACATGATTGCACAC 15942892 >seq13 Length=46045664 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 41047 TGATGGCATTGCCACCTTGTCATTTGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGT 41106 |||||||| |||| ||||| ||| | || || || || || ||| | || |||| Sbjct 164376 TGATGGCACTGCCTCCTTGCCATGCCCTCTGCCAATTCTATGTAGCGAATAGGGAGCTGT 164435 Query 41107 CATGTCAATTGTATCAAAGATCAGGTGACATGGGACTAGGGGTCCCGTTTAACATAGCGA 41166 | || || | || || || ||||| | ||||| || || || || || ||||| || | Sbjct 164436 CTTGCCAGCTCTACCAGAGGTCAGGAGTTATGGGCCTGGGTGTGCCCTTCAACATTGCCA 164495 Query 41167 GTTATGCTCTGCTCACGTATATGATTGCACAC 41198 | ||||| |||||||| || |||||||||||| Sbjct 164496 GCTATGCCCTGCTCACCTACATGATTGCACAC 164527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397425313291675