Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microtus_20ochrogaster_20[refseq_20GCF_5F000317375.1_202012-12-07] 6,335 sequences; 2,287,340,943 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4 385 7e-102 seq26 347 2e-90 seq9 226 4e-54 seq87 203 5e-47 seq42 201 2e-46 seq73 118 2e-21 seq61 89.7 7e-13 >seq4 Length=96435083 Score = 385 bits (426), Expect = 7e-102 Identities = 642/923 (70%), Gaps = 10/923 (1%) Strand=Plus/Plus Query 46288 AAGTCGACATCTAAAGAAAAATGATTATCTTCT---TGTGACATAACTCCCATTTTTTGG 46344 ||||| |||| || | ||| ||| ||| || | |||||| || ||||| | || Sbjct 65463857 AAGTCAGCATCCAAGGTGAAAGAATTCTCTGCTGAATTTGACATCACCCCCATCCTCTGA 65463916 Query 46345 TATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATA 46404 || || || || || ||||| || || || || || ||||| | ||| ||||||||||| Sbjct 65463917 TACTCGCCCACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAAATATTTTCCATG 65463976 Query 46405 AAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTA 46464 || ||||| ||||| || || |||| || | || |||| || || || || Sbjct 65463977 AAGTCAAATGGATTTTCTACTTTGAAAATCTTGCTGAACCCTAGCTCCAGCATAAGCCTG 65464036 Query 46465 TCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACC 46524 || || |||||||| || ||| ||||||| | || ||||| || ||||| || || Sbjct 65464037 TCCGCCACGAATTCGATGTACTGCTTCATCAGGGCGCAGTTCATCCCGATGAGCTTCACA 65464096 Query 46525 GGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATT-ATCGATGT 46583 || || |||||||| |||||||| || || | | || || | |||| | || | Sbjct 65464097 GGCAGGGCCTCCGTGAGAAACTCCTGCTCTAGCCTCACTGCGTT-GATAATGATTTCTTG 65464155 Query 46584 TACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACA 46643 |||| ||| ||| || || | || || | ||||| | || ||||| ||| Sbjct 65464156 TACTCTTTGCTCCGGCGGCTTGTGTACCAGGTGCCTGAACATCAGGCAGGCAAAGCAACA 65464215 Query 46644 ATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCC 46703 || | || |||||||| ||||| | ||||| ||||| || || |||||||| ||||| Sbjct 65464216 GTGTAAACCCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCAGTCC 65464275 Query 46704 ACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGC 46763 || || |||||||| ||||| | | | || || ||||| |||| || ||||| ||||| Sbjct 65464276 CCGTTTCTTGAGCCAGAATATTGACACAAAGGAGCCAGAGAAGAGGATCCCTTCCACAGC 65464335 Query 46764 CGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG----AATCCACCTTTGAG 46819 || || || |||| || ||||| || | || || || | |||||| | | | Sbjct 65464336 AGCAAAGGCCACAACTCGTTCTCCATAGGTAGCTTCTTTGTCCCCCAATCCAACGCAGGG 65464395 Query 46820 CCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttt 46879 |||| || ||||| || || |||||||||||||| || |||||||| |||||| | | Sbjct 65464396 CCCAGTCGGCCTTCTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATATTCCC 65464455 Query 46880 tttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG-AATG 46938 | || | |||||||| || ||||| || | ||||| |||||||| ||||| ||| Sbjct 65464456 TCTCTTTGGAATCTTTAATGTAAGTATCGATGAGGAGACTGTACATTTCAGAATGTTATG 65464515 Query 46939 TTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTA 46998 ||||| || || || || || || || ||||| | || || |||| ||| || ||| Sbjct 65464516 TTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACCTGAACTTCTTGG 65464575 Query 46999 CAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAAT 47058 | || || || || || ||||| ||||| |||||||| |||||||| || |||| Sbjct 65464576 CTGAAGCGCTCCACCAGGTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGCCAGG 65464635 Query 47059 ACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTT 47118 || || ||||||| | | || |||| |||| | ||||| | ||||| || Sbjct 65464636 ACGTGAGATATAAAATGTCTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGAATATCCTTG 65464695 Query 47119 GATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCAT 47178 || | || || || ||||| |||||||| || ||||| ||||| || ||||| | ||| Sbjct 65464696 GAGAGGTCGACCTCCTCAGCCGTCCAGAAGGAAGCCTCGGCTTTCTTGTACATCTGCCAG 65464755 Query 47179 ATATCACGATATTGGATCGGAAA 47201 |||||| | |||| ||| ||||| Sbjct 65464756 ATATCATGGTATTCGATGGGAAA 65464778 >seq26 Length=66536344 Score = 347 bits (384), Expect = 2e-90 Identities = 643/936 (69%), Gaps = 23/936 (2%) Strand=Plus/Plus Query 46288 AAGTCGACATCTAAAGAAAAATGATTATCTTCT---TGTGACATAACTCCCATTTTTTGG 46344 ||||| |||| || | |||| ||| ||| || | ||| || || |||| | || Sbjct 31519072 AAGTCAGCATCCAAGGTAAAAGAATTCTCTGCTGAATTTGAAATCACCTCCATCCTCTGA 31519131 Query 46345 TATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATA 46404 || ||||| || || ||||| | || || || || ||||| | ||| |||||||||| Sbjct 31519132 TACTCACCCACTCGCTTCTCAAGGAAGTTTGTCTTCCCTTCTAGTGAAATATTTTCCACG 31519191 Query 46405 AAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTA 46464 || ||||| ||||| || || |||| || | || |||| || || || | Sbjct 31519192 AAGTCAAAAGGATTTTCTACTTTGGAAATCTTGCTGAACCCTAGCTCCAGCATAAGCGTG 31519251 Query 46465 TCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACC 46524 || || |||||||| || ||| ||||| | || ||||| | ||||| || || Sbjct 31519252 TCGGCCACGAATTCGATGTACCGCTTCATGAGGGTGCAGTTCATCCTGATGAGCTTCACA 31519311 Query 46525 GGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATT-ATCGATGT 46583 || || |||||||| |||||| | || | || | || || | |||| | || | Sbjct 31519312 GGCAGGGCCTCCGTGAGAAACACCTGCTTTATCCTCACTGCGTT-GATAATGATTTCTTG 31519370 Query 46584 TACTGTTTCCTCACTTGGTGGAT-GCAT--CAAATGTTTAAACATTAAACATGCAAAATC 46640 |||| ||| ||| ||| || | || | || || | ||||| | || ||||| | Sbjct 31519371 TACTCTTTGCTC---TGGCGGCTTGCTTACCAGGTGCCTGAACATCAGGCAGGCAAAGCC 31519427 Query 46641 ACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAG 46700 ||| || | | |||||||| ||||| | || || |||||||| || |||||||| || Sbjct 31519428 ACAGTGTAAACGCTCATCTCTGCTAATAAGCTCTTTGGAAAATGTAAGGCCAGGCATCAG 31519487 Query 46701 TCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 46760 ||| | || |||||||| ||||| | ||| ||||| ||||| ||||| ||| ||||||| Sbjct 31519488 TCCCTGTTTCTTGAGCCAGAATATTGACGCAAAAGAGCCAGAGAAGAAGATGTCTTCTAC 31519547 Query 46761 AGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG------AATCCACCT 46814 ||| || || || |||| ||| ||||| || | | || || || |||||| | Sbjct 31519548 AGCAGCAAAGGCCACAACTCTTTCTCCATAGGTAG--TCTTTTTGTCTCCAAATCCAACG 31519605 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 | ||||| ||||||| || || |||||||||||||| || |||||||| |||||| | Sbjct 31519606 CAGGGCCCAGTCAGCCTACTTTTTCACACAAGGCATTGTCTCAATAGCATTGAAGAGATA 31519665 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 | | || | |||||||| ||| || || | ||||| |||||||| ||||| Sbjct 31519666 TTCCCTCTCTTTGGAATCTTTAA----TGTGTCAATGAGGAGACTGTACATTTCAGAATG 31519721 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 ||||||| || || || || || || || ||||| | || || |||| ||| || || Sbjct 31519722 TTTGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACCTGAACTTC 31519781 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 | | ||| || || || || ||||| ||||| |||||||| || ||||| || || Sbjct 31519782 TTGGCTAAAGCGCTCCACCAGGTTTTCATTGACTATGCCATCACTGGCTGCAAAGAAAGC 31519841 Query 47055 CAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATC 47114 || || || ||||||| | | || || | |||| | | ||| | ||||| Sbjct 31519842 CAGGACGTGAGATATAAAATGTCTCTCGTCAGGTTTCAGCGCTTCCTAGTGTTGAATATC 31519901 Query 47115 TTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATT 47174 || || | || || || |||||||||||||| | ||||| ||||| || ||||| | Sbjct 31519902 CTTGGAGAGGTCCACCTCGTCAGCTGTCCAGAAGAAGGCCTCGGCTTTCTTGTACATCTG 31519961 Query 47175 CCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 ||| |||||| | |||| || ||||| | ||| || Sbjct 31519962 CCAGATATCATGGTATTCAATGGGAAAGACAACGAA 31519997 >seq9 Length=86001432 Score = 226 bits (250), Expect = 4e-54 Identities = 409/592 (69%), Gaps = 12/592 (2%) Strand=Plus/Plus Query 46288 AAGTCGACATCTAAAGAAAAATGATTATCTTCT---TGTGACATAACTCCCATTTTTTGG 46344 ||||| |||| || | ||| ||| ||| || | |||||| || ||||| | || Sbjct 36369702 AAGTCAGCATCCAAGGTGAAAGAATTCTCTGCTGAATTTGACATCACCCCCATCCTCTGA 36369761 Query 46345 TATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATA 46404 || | || || || ||||| || || || || || ||||| | ||| ||||||||||| Sbjct 36369762 TACTTGCCCACGCGCTTCTCAAAGAAGTTTGTCTTCCCTTCTAGTGAAATATTTTCCATG 36369821 Query 46405 AAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTA 46464 | ||||||||||| || || |||| || | ||||||| || || || || Sbjct 36369822 GAGTCAAACGGATTTTCTACTTTGAAAATCTTGCTGAATCCTAGCTCCAGCATAAGCCTG 36369881 Query 46465 TCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACC 46524 || || |||||||| || || ||||||| || | || || ||||| || || Sbjct 36369882 TCCGCCACGAATTCGATGTAGTGCTTCATCAGGGTGCAGCTTATCCCGATGAGCTTCACA 36369941 Query 46525 GGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGAT-ATTATCGATGT 46583 || || |||||||| |||||||| || || || | || || | ||| || || | Sbjct 36369942 GGCAGGGCCTCCGTGAGAAACTCCTGCTCTATCCTCACTGCGT-TGATGATGATTTCTTG 36370000 Query 46584 TACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACA 46643 |||| ||| ||| || || | || || | ||||| | || ||||| ||||| Sbjct 36370001 TACTCTTTGCTCCGGCGGCTTGTGTACCAGGTGCCTGAACATCAGGCAGGCAAAGTCACA 36370060 Query 46644 ATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCC 46703 || | || |||||||| ||||| | ||||| ||||| || || |||||||| ||||| Sbjct 36370061 GTGTAAACCCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCAGTCC 36370120 Query 46704 ACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGC 46763 | || ||||||| ||||| | ||| ||||| |||| |||| || ||||| | ||| Sbjct 36370121 CAGTTTCCTGAGCCAGAATATTGACGCAAAAGAGCCAG---AGAAGATCCCTTCCATAGC 36370177 Query 46764 CGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCTTTGAGC 46820 || || || |||| || ||||| || | || || || | |||||| | | || Sbjct 36370178 AGCAAAGGCCACAACTCGTTCTCCATAGGTAGCTTCTTTGTCCCCAATCCAACGCAGGGC 36370237 Query 46821 CCAATCAGCCTT-TTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871 ||| |||||||| ||| | |||||||||||||| || |||||||| ||||| Sbjct 36370238 CCAGTCAGCCTTCTTTTTCCACACAAGGCATTGTCTCAATAGCATTGAAGAG 36370289 >seq87 Length=2570995 Score = 203 bits (224), Expect = 5e-47 Identities = 340/490 (69%), Gaps = 4/490 (1%) Strand=Plus/Plus Query 46715 GCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGA 46774 |||| ||||| | | | ||||| ||||| ||||| || ||||||||||| || || | | Sbjct 1819200 GCCAGAATATTGACACAAAAGAGCCAGAGAAGAAGATCCCTTCTACAGCAGCAAAGGTCA 1819259 Query 46775 CAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCTTTGAGCCCAATCAGCCT 46831 ||| || ||||| || | ||||| || | |||||| | ||| || |||| Sbjct 1819260 CAACTCGTTCTCCATAGGTAGCATCTTTGTCCCCAATCCAATGCACGGTCCAGTCGGCCT 1819319 Query 46832 TTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTAT 46891 | || || |||||||||||||| || |||||||| | ||| | | | || | || Sbjct 1819320 TCTTTTTCACACAAGGCATTGTCTCAATAGCATTGACAAGATATTCCCTCTCTTTGGAAT 1819379 Query 46892 CTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCA 46951 |||||| || || | || | ||||| |||||||| ||||| |||||||| || || | Sbjct 1819380 CTTTAATGTAGGTGACAATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGCAA 1819439 Query 46952 TCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCAG 47011 | || || || || ||||| || || || |||| ||| || ||| | ||| | || Sbjct 1819440 TTTGGAAGCCATAGAAACAGCTGGCCTCTGTAACCTGAACTTCTTGGCTAAAGCACTCGA 1819499 Query 47012 ACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAA 47071 || ||| ||||| |||| ||||||||| | |||| || |||| || || |||| Sbjct 1819500 CCAGATTTTCATTGACTAATCCATCACTCGTCACAAAGAAAGCCAGGACGTGGGATATAA 1819559 Query 47072 AATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 47131 ||| | | || |||| |||| | ||||| | ||||| || || | || || | Sbjct 1819560 AATGTCTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGAATATCCTTGGAGAGGTCCACCT 1819619 Query 47132 CTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATT 47191 | ||||| ||||||| || ||||| ||||| || ||| | | ||| |||||| | || | Sbjct 1819620 CCTCAGCCATCCAGAAGGAGGCCTCGGCTTTCTTGTAC-TCTGCCAGATATCATGGTACT 1819678 Query 47192 GGATCGGAAA 47201 ||| ||||| Sbjct 1819679 CGATAGGAAA 1819688 Score = 91.5 bits (100), Expect = 2e-13 Identities = 182/269 (68%), Gaps = 3/269 (1%) Strand=Plus/Plus Query 46288 AAGTCGACATCTAAAGAAAAATGATTATCTTCT---TGTGACATAACTCCCATTTTTTGG 46344 ||||| |||||| | |||| ||| ||| || | ||| || || ||||| | || Sbjct 1818824 AAGTCAGTATCTAAGGTAAAAGAATTCTCTGCTGAATTTGATATCACCCCCATCCTCTGA 1818883 Query 46345 TATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATA 46404 | || || || | ||||| || || || || || |||| | ||| ||||||||||| Sbjct 1818884 CACTCGCCCACTTGCTTCTCAAAGAAGTTTGTCTTCCCTTGTAGTGAAATATTTTCCATG 1818943 Query 46405 AAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTA 46464 || ||||||||||| || || |||| || | || |||| || | || || Sbjct 1818944 AAGTCAAACGGATTTTCTACTTTGAAAATCTTGCTGAACCCTAGCTCCAGTGTAAGCCTG 1819003 Query 46465 TCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACC 46524 ||||| |||||||| || ||| ||| ||| || ||||| | ||||| || Sbjct 1819004 TCTGCCACGAATTCGATGTACTGCTTCGTCAGGGTGCAGTTCATCCTGATGAGCTTCTTA 1819063 Query 46525 GGTAGAGCCTCCGTAAGAAACTCTTGTTC 46553 || || |||||||| |||||||| || || Sbjct 1819064 GGCAGGGCCTCCGTGAGAAACTCCTGCTC 1819092 >seq42 Length=9663327 Score = 201 bits (222), Expect = 2e-46 Identities = 349/504 (69%), Gaps = 5/504 (1%) Strand=Plus/Minus Query 46288 AAGTCGACATCTAAAGAAAAATGATTATCTTCT---TGTGACATAACTCCCATTTTTTGG 46344 ||||| |||| || | ||| ||| ||| || | |||||| || ||||| | || Sbjct 3436142 AAGTCAGCATCCAAGGTGAAAGAATTCTCTGCTGAATTTGACATCACCCCCATCCTCTGA 3436083 Query 46345 TATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATA 46404 || | || || || ||||| || || || || || ||||| | ||| ||||||||||| Sbjct 3436082 TACTTGCCCACGCGCTTCTCAAAGAAGTTTGTCTTCCCTTCTAGTGAAATATTTTCCATG 3436023 Query 46405 AAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTA 46464 | ||||||||||| || || |||| || | ||||||| || || || || Sbjct 3436022 GAGTCAAACGGATTTTCTACTTTGAAAATCTTGCTGAATCCTAGCTCCAGCATAAGCCTG 3435963 Query 46465 TCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACC 46524 || || |||||||| || || ||||||| || | || || ||||| || || Sbjct 3435962 TCCGCCACGAATTCGATGTAGTGCTTCATCAGGGTGCAGCTTATCCCGATGAGCTTCACA 3435903 Query 46525 GGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGAT-ATTATCGATGT 46583 || || |||||||| |||||||| || || || | | || | ||| || || | Sbjct 3435902 GGCAGGGCCTCCGTGAGAAACTCCTGCTCTATCCTCAAGGCGT-TGATAATGATTTCTTG 3435844 Query 46584 TACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACA 46643 |||| ||| ||| || || | || || | ||||| | || ||||| ||||| Sbjct 3435843 TACTCTTTGCTCCGGCGGCTTGTGTACCAGGTGCCTGAACATCAGGCAGGCAAAGTCACA 3435784 Query 46644 ATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCC 46703 || | || |||||||| ||||| | ||||| ||||| || || |||||||| ||||| Sbjct 3435783 GTGTAAACCCTCATCTCTGCTAATAAGCTCGTTGGAAAACGTAAGGCCAGGCATCAGTCC 3435724 Query 46704 ACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGC 46763 || || |||||||| ||||| | ||| ||||| ||||| ||||| || ||||| ||||| Sbjct 3435723 CCGTTTCTTGAGCCAGAATATTGACGCAAAAGAGCCAGAGAAGAAGATCCCTTCCACAGC 3435664 Query 46764 CGCGAATGCGACAAGTCTCTCTCC 46787 || || || |||| || ||||| Sbjct 3435663 AGCAAAGGCCACAACTCGTTCTCC 3435640 Score = 118 bits (130), Expect = 2e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 |||||| | | ||||| || ||||| || || |||||||||||||| || |||||||| Sbjct 3435490 AATCCAACGAAGGGCCCAGTCGGCCTTCTTTTTCACACAAGGCATTGTCTCAATAGCATT 3435431 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925 |||||| | | | || | |||||||| || ||||| || | ||||| ||||| Sbjct 3435430 GAAGAGATATTCCCTCTCTTTGGAATCTTTAATGTAAGTATCGATGAGGAGACTGTACAT 3435371 Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985 ||| ||||| |||||||| || || || || || || || ||||| | || || |||| Sbjct 3435370 TTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAAC 3435311 Query 46986 CTGTACCTCT 46995 ||| || ||| Sbjct 3435310 CTGAACTTCT 3435301 Score = 113 bits (124), Expect = 6e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 46806 AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATT 46865 |||||| | | ||||| || ||||| || || |||||||||||||| || |||||||| Sbjct 3436376 AATCCAACGAAGGGCCCAGTCGGCCTTCTTTTTCACACAAGGCATTGTCTCAATAGCATT 3436317 Query 46866 AAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACAT 46925 |||||| | | | || | |||||||| || ||||| || | ||||| ||||| Sbjct 3436316 GAAGAGATATTCCCTCTCTTTGGAATCTTTAATGTAAGTATCGATGAGGAGACTGTACAT 3436257 Query 46926 TTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 46985 ||| ||||| |||||||| || || || || || || || ||||| | || || ||||| Sbjct 3436256 TTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAAT 3436197 Score = 109 bits (120), Expect = 8e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 47017 TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAAATAT 47076 || ||||| ||||| ||||||||||| ||||| || |||| || || ||||||| | Sbjct 3434561 TTTTCATTGACTATGCCATCACTAGCCGCAAAGAAAGCCAGGACGTGAGATATAAAATGT 3434502 Query 47077 TTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCA 47136 | || |||| |||| | ||||| | ||||| || || | || || || ||| Sbjct 3434501 CTCTCGTCGGGTTTCAGCGCTTCCCAGTGTTGAATATCCTTGGAGAGGTCGACCTCCTCA 3434442 Query 47137 GCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATC 47196 || |||||||| || ||||| ||||| || ||||| | ||| |||||| | |||| ||| Sbjct 3434441 GCCGTCCAGAAGGAAGCCTCGGCTTTCTTGTACATCTGCCAGATATCATGGTATTCGATG 3434382 Query 47197 GGAAA 47201 ||||| Sbjct 3434381 GGAAA 3434377 >seq73 Length=3316092 Score = 118 bits (130), Expect = 2e-21 Identities = 106/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| || || || ||||| || |||||||| || || || | ||| Sbjct 2397342 TGAAATTCTCCTGACAAGACCCTGCGCGTGTAGATGTTACTGGTGTAAGGCTCAATGGAT 2397283 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| || |||| ||| ||||||||||||||||| ||||| || || | | |||||| Sbjct 2397282 TCATTATTCCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 2397223 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 2397222 TTTCTTATACCAT 2397210 Score = 105 bits (116), Expect = 1e-17 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || || | ||| |||||||| ||||| | || || || || || || || |||| || Sbjct 2379299 CTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCTAAGATA 2379240 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | |||||| |||| || ||| | || || || |||||||| | | Sbjct 2379239 GCATAGTCAGGGTGCTTTGTAGTCAAGGTTGCGGCTGTCTCAGCAGCCAAAGTATCCAGT 2379180 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | || || |||||| | || || ||||| || |||||||||| Sbjct 2379179 TCCACTGTGGTGACTCCGCTGTACAGGCCTTGGATTACTTTCATGG 2379134 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || || || || | |||||||| |||||||| ||||| || |||||||| || ||| Sbjct 2384997 GTCCCAGCGTTGAAGAGAGTAGGAGAGGCATGAGTAAACCACTTCTCAGAAAGCAGGTTG 2384938 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 || |||||||| | || || ||||| || ||||| || |||| || | ||||||| Sbjct 2384937 TAGGTTTCAATTGCAGCATCGATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 2384878 Query 77114 ATATGCTGAGGTCGTTC 77130 |||||||| |||| ||| Sbjct 2384877 ATATGCTGTGGTCTTTC 2384861 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 76510 ATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACA 76569 ||||||| ||||| || ||||||||||| ||||||| ||||||||| ||||| ||||| Sbjct 2391497 ATATAACTTCTCAAACTCCTCTCCCCAAACCTCATCCAGACCAGGACACTCATTTGGACA 2391438 Query 76570 CATCAATGACCACTC 76584 |||||||||||| || Sbjct 2391437 CATCAATGACCAGTC 2391423 >seq61 Length=4506808 Score = 89.7 bits (98), Expect = 7e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186 ||| || || || |||||||| ||||||| ||||| ||||||||| ||||| |||||| | Sbjct 570951 TACCTCCTCTGCAGTCCAGAAAGACGCCTGTGCTTGTTTATACATCTTCCAAATATCAGG 570892 Query 47187 ATATTGGATCGGAAAAATAACAAA 47210 || ||||||||||| || ||||| Sbjct 570891 GTACTGGATCGGAAAGATGACAAA 570868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712877944507200