Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2669 361 6e-95 seq18 167 2e-36 seq6 145 8e-30 seq4 140 3e-28 seq22 138 1e-27 seq14 136 4e-27 seq19 132 5e-26 seq25 127 2e-24 seq16 96.9 4e-15 seq2812 93.3 4e-14 seq5 93.3 4e-14 seq8 91.5 2e-13 >seq2669 Length=49141 Score = 361 bits (400), Expect = 6e-95 Identities = 573/808 (71%), Gaps = 20/808 (2%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | ||| | || ||||||||||| |||| | || ||||| | |||| || Sbjct 23043 GAGCCGTTACTGAGAGAAAACCCCCGCCGCTTCGCTGTCTTTCCCATCGAGTACCATGAT 22984 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || |||||||| || || ||||| | ||||||||||||||| Sbjct 22983 ATCTGGCAGATGTACAAGAAAGCCGAGGCCTCCTTTTGGACTGCCGAGGAGGTGGACCTT 22924 Query 116696 TCCAAGGACACG-AGCGACTGGGAGCGCT-TGAACGACAACGAGCGCCATTTCATCAAGC 116753 |||||||| | ||| |||||||| ||| |||| | | ||| | ||||| || | Sbjct 22923 TCCAAGGATATTCAGC-ACTGGGAG-GCTCTGAAACCCGATGAGAGACATTTTATATCTC 22866 Query 116754 ACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG-T 116812 | || ||||| || || || || || || ||||| ||||| ||||| |||| ||||| | Sbjct 22865 ATGTTCTGGCTTTCTTTGCAGCGAGTGATGGCATAGTCAATGAGAACTTGGTGGAGCGAT 22806 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 || || || || || || || | ||||| || || ||||| ||||| || || |||||| Sbjct 22805 TTAGC-CAAGAAGTTCAAGTTACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCCATG 22747 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT----GCGCTCTTC 116928 || ||| | ||||| |||||||| |||| || ||||| ||| | | | | Sbjct 22746 GAAAACATACACTCTGAAATGTACAGTCCCCTTATTGACACTTACATTAAAGATCCCAAG 22687 Query 116929 GGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 | | ||||| || | || || || || || |||||||| || || || ||||||| Sbjct 22686 GAAAGAGAATATC----TCTTCAATGCTATTGAAACGATGCCTTGTGTGAAGAAGAAGGC 22631 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 || ||||| ||||||||| | | || |||||| | | || || ||| | ||||| Sbjct 22630 TGACTGGGCCTTGCGCTGGACTGGGGACAAAGAGGCTACGTATGGAGAACGCGTTGTGGC 22571 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 ||| || || || || || |||||||||| || ||| || | ||||| |||||||| Sbjct 22570 CTTTGCCGCTGTAGAAGGAATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGGCTCAA 22511 Query 117109 GAAAC-GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGG 117167 ||||| | || || ||||| ||||| || || ||| ||||| || || ||||||| Sbjct 22510 GAAACGGGGGGCTGATGCCGGGCCTTACATTTTCCAATGAGCTTATTAGTAGAGACGAGG 22451 Query 117168 GTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGG 117227 || | || || ||||||||||| || |||||||||| |||| || | | | |||| | Sbjct 22450 GTTTACACTGTGACTTTGCCTGCCTGATGTTCAAGCACCTGGTACA-CAAGCCAGCGGAG 22392 Query 117228 C-GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286 | | | ||||| ||||| ||||| || || || |||||| |||||| | || Sbjct 22391 CAGAGGGTCAGAGAGATAATCACCAAC---GTTAGGATAGAGCAGGAGTTCCTCCCGGAG 22335 Query 117287 GCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTC 117346 || |||| ||| || | ||| | |||||| |||| ||| || || ||||| Sbjct 22334 GCCTTGCCCGTGAAGCTCATCGGAATGAATTGCACTTTGATGAAGCAGTATATTGAGTTT 22275 Query 117347 GTCGCCGACAGGCTGCTGCTCGAGCTGG 117374 || ||||||||||| |||| ||||||| Sbjct 22274 GTGGCCGACAGGCTTATGCTGGAGCTGG 22247 >seq18 Length=146158383 Score = 167 bits (184), Expect = 2e-36 Identities = 419/622 (67%), Gaps = 25/622 (4%) Strand=Plus/Minus Query 116601 GCCGGTTCGTGATTTTCCCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCG 116660 |||| |||| | || ||||| | |||| || || |||| ||||||| || || | Sbjct 66703933 GCCGCTTCGCTGTCTTTCCCATCTAGTACCATGATATCTGGCAGATGTACAGGAAAGCTG 66703874 Query 116661 AGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGC 116720 |||| | || ||||| | |||||||||||||| |||||||| | ||| ||||||| Sbjct 66703873 AGGCCACCTTTTGGACTGCTGAGGAGGTGGACCTTTCCAAGGATATCAGC-ACTGGGAA- 66703816 Query 116721 GCT-TGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGC 116779 ||| |||| | | ||| | ||||| || ||| | ||||| || || || || || Sbjct 66703815 GCTGTGAAACCCGATGAGAGACATTTTATAGCTCACATTCTGGCTTTCTTTGCAGCAAGT 66703756 Query 116780 GACGGCATCGTCAACGAGAATCTGGTCGAGCG-TTTCGCTCAGGAGGTGCAGGTGGCCGA 116838 || ||||| |||| | || |||| ||||| ||| || || || | || || | || Sbjct 66703755 GATGGCATACTCAATGCAAACTTGGTGGAGCGATTTAGC-CAAGAAATTCAAGTTACAGA 66703697 Query 116839 GGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAA-CGTGCACTCGGAAATGTATT 116897 ||| | || || || ||||| || | | |||| |||| | | ||||| |||||||| Sbjct 66703696 GGCTGGCTGTTT-TATGGCTTCCAAACTGGCATG-AGAAGCATACACTCTAAAATGTATA 66703639 Query 116898 CGACCCTCATCGACACGTACGT----GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAAC 116953 ||| || ||||| ||| | | | | | | ||||| || | || || Sbjct 66703638 GTCTCCTTATTGACACTTACATTAAAGATCGCAAAGAAAGAGAATATC----TTTTCAAT 66703583 Query 116954 GCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCC 117013 || || || || ||||| || |||||||| || ||||| ||| |||| | Sbjct 66703582 GCTATTGAAACAATGCCT---GT----GAGAAGGCTGACTGGGCCTTGCATTGGACTGGG 66703530 Query 117014 GGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTC 117073 | || ||| || | | | || || | |||||||| || || || || | ||||| Sbjct 66703529 GACAAAGAAGCTACATATGCAGAACGAGTTGTGGCCTTTGCCGCGGTAGAAGCAATCTTC 66703470 Query 117074 TTTT-CGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCT 117132 |||| | || ||| || | ||||| ||||||||||||| || || ||||| ||||| Sbjct 66703469 TTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAAACAGGGACTGATGCCGGGCCT 66703410 Query 117133 GAC-TTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 || ||| ||| ||||| || ||| ||||||||| | || || ||||||| || Sbjct 66703409 TACATTTTTCCAATGAGCTTATTAGCAGAGACGAGGGTTTACACTGGGACTTTGTCTACC 66703350 Query 117192 TGCTGTTCAAGCATTTGGTGCA 117213 || |||||||||| |||| || Sbjct 66703349 TGATGTTCAAGCACCTGGTACA 66703328 >seq6 Length=112758220 Score = 145 bits (160), Expect = 8e-30 Identities = 203/279 (73%), Gaps = 7/279 (3%) Strand=Plus/Plus Query 117044 GTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGG 117103 |||||||| || |||| || || |||||||||| || ||| || | | ||| ||| Sbjct 9090602 GTGGCCTTTGCCACCGTAGAAGGAATCTTCTTTTCCGGTTCTTTTGCATCAAGATTCTGG 9090661 Query 117104 CTCAAGAAACGCGGCCTCATGCCCGGCCT--GACTTTCAGCAACGAGCTCATCTCCAGGG 117161 ||||||||||| || || ||||| ||||| |||||| ||| ||||| || ||| | Sbjct 9090662 CTCAAGAAACGGGGACTGATGCCGGGCCTTACACTTTC--CAATGAGCTTATTAGCAGAG 9090719 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||||||| | || || ||||||||||| || |||||||||| |||| || | | | | Sbjct 9090720 ACGAGGGTTTACACTGGGACTTTGCCTGCCTGATGTTCAAGCACCTGGTACA-CAAGCCA 9090778 Query 117222 GCGCGGC-GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTC 117280 ||| || | | |||| ||||| ||||| ||||||| || |||||| ||||||| Sbjct 9090779 GCGGAGCAGAGGGTCAAAGAGATAATCACCAACGCGGTTAGGATAGAGCAGGACTTCCTC 9090838 Query 117281 ACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGC 117319 || || || |||| | | || ||||| | |||||| Sbjct 9090839 ACGGAGGCCTTGCCCGCGAAGCTCATGGGA-TGAATTGC 9090876 >seq4 Length=117747451 Score = 140 bits (154), Expect = 3e-28 Identities = 160/213 (75%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || || || || ||||| ||||||||| | || || || || Sbjct 57378720 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAGCCC 57378779 Query 40747 ACCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | ||||| | |||| || || | || ||||||||||||||| | || Sbjct 57378780 AGTGACACCATCGAAAACG-TGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGA 57378838 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 ||| || | || |||| || ||||| |||||||| || | ||||||||| || || Sbjct 57378839 CCANCAGAGGCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGATTA 57378898 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||||||| | || ||||| || || Sbjct 57378899 CAACATCCAGAAGGAGTCAACCCTGCACCTGGT 57378931 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || |||||||| || || | |||||| |||||||| | || ||||| || Sbjct 57051388 AACATGCAGATCTTCGTAAAGACCCTGATGGGCAAGACCATCACTCTTGAGGTCGAGCCC 57051329 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||||| || || | ||||| || |||||||| | ||| Sbjct 57051328 AGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTGAC 57051269 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | || || | ||||||||||||||||| || | |||||||| ||||||| Sbjct 57051268 CAGCAGAGGCTGATATTAGCGGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTAC 57051209 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||| ||| |||| |||| || Sbjct 57051208 AACATCCAGAAAGAGTCCACCTTGCACCT 57051180 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || || ||||| |||||||| | || || || || Sbjct 55387791 AACATGCAGATCTTCGTGAAGACCCTGACAGGCAAGACCATCACTTTTGAGGTGGAGCCC 55387732 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||||| || || | |||||||| |||||||| | ||| Sbjct 55387731 AGTGACACCATCAAGAATGTCAAGGTCAAGATCCAAGACAAAGAAGGCATCCCAGTTGAC 55387672 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | || | | ||| |||||||||||||| || | |||||||| |||||| Sbjct 55387671 CAGCAGAGGCTGGTATTCGCAGGCAAACAGCTGGAGGATGGACGCACCCTTTCAGACTAC 55387612 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| | |||| || | || ||| |||| || | |||||| Sbjct 55387611 AACATCCAGAACCATTCCACCTTGTACCTGGTGCTGCGTCTGCGTGGCGGC 55387561 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || |||||||| |||||||| | || || || || Sbjct 92566868 AACATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACTCTTGAGGTAGAGCCC 92566809 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||||| || || | ||||| || ||| |||| | ||| Sbjct 92566808 AGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCCTCCCACCTGAC 92566749 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | || || | ||| ||||||||||| || || | | |||||| || ||| Sbjct 92566748 CAGCAGAGGCTGATATTCGCCGGCAAACAGCTAGAGGATGGCCACACCCTGTCTGATTAC 92566689 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| ||| |||| |||| || ||| |||| || | || ||| Sbjct 92566688 AACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTGCGCGGTGGC 92566638 Score = 91.5 bits (100), Expect = 2e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || |||| ||| |||||||| | || ||| | || Sbjct 55519395 AACATGCAGATCTTCGTGAAGACCCTGACGGACAAGACCATCACTCTTGAGGTCAAGCCC 55519336 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | ||||||| || || | |||| || |||||||| ||| Sbjct 55519335 AGTGACACCATCGAGAATGTCAAGGACAAGATCCAAGACAGTGAAGGCATCCCACTTGAC 55519276 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || || | || | | || |||||||||||||| || | ||||||| ||||| | Sbjct 55519275 CAACAGAGGCTGGTGTTCGATGGCAAACAGCTGGAGGATGGCTGCACCCTGTCCGACTGC 55519216 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||| || |||| || |||| | | |||| Sbjct 55519215 TACATCCAGAACCAGTCCACCTTGTATCTGGAGCTGCG 55519178 >seq22 Length=147524369 Score = 138 bits (152), Expect = 1e-27 Identities = 169/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || | |||||| |||||||| | || ||||| || Sbjct 136850953 AACATGCAGATCTTCGTGAAGACCCTGANGGGCAAGACCATCACTCTTGAGGTCGAGCCC 136851012 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | |||||| || || | ||||| || |||||||| | || Sbjct 136851013 AGTGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATCCCACCTAAC 136851072 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | || || | |||||||||||||||||| || | |||||||| ||||||| Sbjct 136851073 CAGCAGAGGCTGATATTCGCGGGCAAACAGCTGGAGGATGGCCGCACCCTGTCCGACTAC 136851132 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||| ||| |||| |||| || ||| |||| || | || ||| Sbjct 136851133 AACATCCAGAAAGAGTCCACCTTGCACCTGGTGCTGCGTCTGCGCGGTGGC 136851183 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || ||||| ||||||||||| |||| || ||| || | Sbjct 124974467 ATGCAGATCTTTGTGAAGACCCTTACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 124974526 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | |||| || || | || || || || || || | || ||| Sbjct 124974527 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 124974586 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || || |||||||| || | || || | ||||||||| Sbjct 124974587 CAGAGACTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAAC 124974646 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 | || |||||| |||| || ||||| |||||| Sbjct 124974647 NTTCAAAAGGAGTCCACCCTTCATCTGGTGTTG 124974679 >seq14 Length=171410997 Score = 136 bits (150), Expect = 4e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||||| || || || || ||||| ||||||||| | || || || || Sbjct 144150577 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTAGAGGTGGAGCCC 144150518 Query 40747 ACCGACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | ||||| | |||| || || | || ||||||||||||||| | || Sbjct 144150517 AGTGACACCATTGAAAACG-TGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGA 144150459 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | || |||| || ||||| ||||| || || | ||||| ||| || || Sbjct 144150458 CCAGCAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACTCTCTCTGATTA 144150399 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| ||| | || ||||| || || | || ||||||| ||| Sbjct 144150398 CAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 144150347 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/203 (69%), Gaps = 22/203 (11%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAG-- 40744 ||||||||||| ||| || || || || ||| ||||||||| | | || |||| Sbjct 114264418 AAAATGCAAATCTTCAAGAAGACCCTGACCAACAAGACCATCACCCTACAGGT-GAAGCC 114264476 Query 40745 --------CCACCGACAGCGTGCAAAC---GCTCAAGGAAAAAATTCTCGACAAAGAGGG 40793 ||| ||| | |||| || | | || ||||||| | |||||||| Sbjct 114264477 CAGTGACACCATCGAGAACGTGAAAGCCGAGATCCAGGAAAA--------AGAAAGAGGG 114264528 Query 40794 CATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCAC 40853 ||||||| | ||||||||| | ||||||| || ||||| ||||| || || | |||| Sbjct 114264529 CATCCCCCCTGACCAGCAAAGGCTCATCTTTGCCGGCAAGCAGCTAGAAGATGGCTGCAC 114264588 Query 40854 CCTCAACGACTACAACATCCAGA 40876 |||| || ||||||||||||| Sbjct 114264589 CCTCTCTGATTACAACATCCAGA 114264611 >seq19 Length=145277780 Score = 132 bits (146), Expect = 5e-26 Identities = 171/232 (74%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 |||||||| || ||| | || || || || |||| ||||||||| | || || || || Sbjct 136502055 AAAATGCAGATCTTCCTGAAGACCCTGACCAGCAAGACCATCACCCTGGAGGTGGAGCCC 136501996 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | | |||| | |||| || || | || ||||||||||||||| | || Sbjct 136501995 AGTGACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCC-CTGA 136501938 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| | || |||| || ||||| |||||||| || | ||||||||| || || Sbjct 136501937 CCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGATTA 136501878 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||||||| | || ||||| || || | || ||||||| ||| Sbjct 136501877 CAACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 136501826 >seq25 Length=158037523 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || ||||| ||||||||| | || || || ||| Sbjct 45424653 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 45424594 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | || |||| | |||| || || | || ||||||||||||||| | ||||| Sbjct 45424593 GACACCATCGCGAACG-TGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCA 45424535 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || ||||| ||||| || || | ||||| ||| || ||||| Sbjct 45424534 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACTCTCTCTGATTACAA 45424475 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||| ||| | || ||||| || || | || ||||||| ||| Sbjct 45424474 CATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGGC 45424426 Score = 114 bits (126), Expect = 1e-20 Identities = 117/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 40765 CTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTAC 40824 || |||| || || | || ||||||||||||||| | |||||||| | || |||| Sbjct 45424806 CTGAAGGCCAAGATCCAGGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTGATCTTT 45424747 Query 40825 GCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCC 40884 || ||||| |||||||| || | ||||||||| || |||||||||||||||||| | Sbjct 45424746 GCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGATTACAACATCCAGAAGGAGTCA 45424687 Query 40885 ACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || ||||| || || | ||| ||||||| ||| Sbjct 45424686 ACCCTGCACCTGGTCCTCCGCCTGAGGGGTGGC 45424654 >seq16 Length=152576986 Score = 96.9 bits (106), Expect = 4e-15 Identities = 100/130 (77%), Gaps = 1/130 (1%) Strand=Plus/Plus Query 40788 AGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGA 40847 |||||||| |||| | |||||||| | ||||||| || ||||| |||||||| || | Sbjct 6231719 AGAGGGCACCCCC-CTGACCAGCAGAGCCTCATCTTTGCAGGCAAGCAGCTGGAAGATGG 6231777 Query 40848 GCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTT 40907 |||||||| ||||||||||||||||| ||| | || ||||| || || | || | Sbjct 6231778 CCGCACCCTGTCTGACTACAACATCCAGAAAGAGTCAACCCTGCACCTGGTCCTCCGTCT 6231837 Query 40908 GAGGGGCGGC 40917 |||||| ||| Sbjct 6231838 GAGGGGTGGC 6231847 >seq2812 Length=15740 Score = 93.3 bits (102), Expect = 4e-14 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||| | ||| | || ||||||||||| ||| | | || ||||| | |||| || Sbjct 180 GAGCCNTTACTGAGAGAAAACCCCCGCCGCTTCATTGTCTTTCCCATCGAGTACCATGAT 121 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || |||||||| || || ||||| | |||||||||||||| Sbjct 120 ATCTGGCAGATGTACAAGAAAGCCGAGGCCTCCTTTTGGACTGCTGAGGAGGTGGACCTT 61 Query 116696 TCCAAGGA 116703 ||||||| Sbjct 60 CCCAAGGA 53 >seq5 Length=114734182 Score = 93.3 bits (102), Expect = 4e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 117032 GGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCC 117091 || || ||| | |||||||| || ||||| || || |||||||||| || ||| || Sbjct 21262702 GGAGAACGCGTTGTGGCCTTTGCCGCCGTAGAAGGAATCTTCTTTTCCGGTTCTTTTGCA 21262761 Query 117092 GCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTC 117151 | ||||| |||||||||||||| || || ||||| ||||| || || ||| ||||| Sbjct 21262762 TCGATATTCTGGCTCAAGAAACGGGGGCTGATGCCGGGCCTTACATTTTCCAATGAGCTT 21262821 Query 117152 ATCTCCAGGGACGAGG 117167 || ||| ||||||| Sbjct 21262822 ATTAGCAGAGACGAGG 21262837 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||| | ||| | || ||||||||||| ||||| | || ||||| | |||| || Sbjct 21260071 GAGCCGTTACTGAGAGAAAACCCCCGCCGCTTCGTTGTCTTTCCCATCGAGTACCATGAT 21260130 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGT 116688 || |||| |||||||| || |||||||| || || ||||| | ||| ||||| Sbjct 21260131 ATCTGGCAGATGTACAAGAAAGCCGAGGCCTCCTTTTGGACTGCCGAAGAGGT 21260183 >seq8 Length=97450195 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || ||||||||||| |||| || ||| || | Sbjct 30033074 ATGCAGATCTTTGTGAAGACCCTTACAGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 30033015 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | ||| | |||| || || | || || || || || || | || ||| Sbjct 30033014 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 30032955 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||| |||| || || || |||||||| || | || || | ||||||||| Sbjct 30032954 CAGAGACTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAAC 30032895 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || || |||||| |||| || ||||| |||||| Sbjct 30032894 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTG 30032862 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 116803 GGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCA 116862 ||| |||||||| ||||||||||||||| | ||||| || |||||||| |||||||| Sbjct 32806437 GGTGGAGCGTTTTAGTCAGGAGGTGCAGGTTCCAGAGGCTCGCTGCTTCTATGGCTTTCA 32806378 Query 116863 GATCGCCATGGAGAACGTGCACTCGGAAATGTA 116895 ||| ||| ||||| || ||||| || ||||| Sbjct 32806377 GATTCTCATCGAGAATGTTCACTCAGAGATGTA 32806345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515198835961120