Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq19 82.4 5e-11 >seq19 Length=145277780 Score = 82.4 bits (90), Expect = 5e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461 || |||||||||||||||||||||||||| |||||||| || || ||||| ||||| | | Sbjct 24632917 TACTCTGCTCCAAAATGCCTCCATTGGAAACCATAAACTGGGCCCAGGTCCCCTTCCTGT 24632976 Query 97462 CTATCACAGAA-ACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517 | || | || |||||| | || | | || | |||||||| |||||||| || Sbjct 24632977 CGGGCAGAAAATCCCAAGC-TGTCCAGAAAGTCTCGGGATCCATTGGCATCCCAGAT 24633032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346770636028340