Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq2669 421 8e-113 seq18 232 8e-56 seq6 132 6e-26 seq22 116 5e-21 seq4 116 5e-21 seq5 111 2e-19 seq8 107 2e-18 seq3 98.7 1e-15 >seq2669 Length=49141 Score = 421 bits (466), Expect = 8e-113 Identities = 656/927 (71%), Gaps = 13/927 (1%) Strand=Plus/Plus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCT--TGAGACATAACTCCCATTTT 33292 ||| |||||| |||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 22083 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAATTCGACATGACTCCCATCCT 22142 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 22143 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 22202 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAA 33412 |||| | ||||||||||| || || |||| || ||||| |||| || || | Sbjct 22203 CATGCAGTCAAACGGATTTTCTACTCTGAAAATCTTGTTAAAACCCAGCTCCAGCATAAG 22262 Query 33413 TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 33472 || || || || || || ||||| ||||||| ||||||||||| ||||| || Sbjct 22263 CCTGTCGGCCACAAACTCAATATACTGCTTCATCAAAGTGCAATTCATTCCGATGAGCTT 22322 Query 33473 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAA 33532 || || | ||| | | || || || || || || || || || || || || Sbjct 22323 CACGGGCAAGGCCTCCGGGAGGAACTCCTGCTCTATCC-TAACG--TTGGTGATTATCTC 22379 Query 33533 TCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAAT 33591 ||| || | | || | || | | | |||| | || || ||||||| || || || | Sbjct 22380 TCTGACCCTCTGCTCCGCTGGCTTG-TGTACCAGGTGCTTGAACATCAGGCAGGCAAAGT 22438 Query 33592 CGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTA 33651 | ||||| | |||||||||||||||||| | || || ||||| || || || ||||| | Sbjct 22439 CACAGTGTAAACCCTCGTCTCTACTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCA 22498 Query 33652 GGCCACGCTTT-TTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCT 33710 | || | ||| || ||||| ||||| || || || || ||||||||||||||||||||| Sbjct 22499 GCCCCCCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCT 22558 Query 33711 ACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTTT 33767 || || |||||||| | || | |||||||| | | | |||| |||| Sbjct 22559 ACAGCGGCAAAGGCCACAACGCGTTCTCCATACGTAGCCTCTTTGTCCCCAGTCCAGCGC 22618 Query 33768 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33827 ||||| || |||||||| || ||||||||||||||||| || ||||| |||||||| Sbjct 22619 AAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATCGTTTCAATAGCATTGAAGAGATAT 22678 Query 33828 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33887 | | |||| || |||||||| ||||| || || | |||| |||||||| || || Sbjct 22679 TCTCTTTCCTTGGGATCTTTAATGTAAGTGTCAATAAGGGGACTGTACATTTCAGAGTGT 22738 Query 33888 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 |||||||| ||||| || || || || |||||||| | ||||| |||| || |||||| Sbjct 22739 ATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACTTGAACTTCT 22798 Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007 | |||||| || | || || ||||| ||||| |||||||| |||||||| || ||| Sbjct 22799 TGGCTAAATCGCTCCACCAAGTTCTCATTGACTATGCCATCACTCGCTGCAAAGAAAGCC 22858 Query 34008 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCT 34067 | ||||| |||||||| | | || || ||| | || | ||| | | ||||| Sbjct 22859 AGAACATGAGATATAAAATGTCTCTCATCGGGTTTCAGAGCCTCCCAGTGCTGAATATCC 22918 Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127 || || | ||||| || || | |||||||| || ||||| || || || ||||| | | Sbjct 22919 TTGGAAAGGTCCACCTCCTCGGCAGTCCAAAAGGAGGCCTCGGCTTTCTTGTACATCTGC 22978 Query 34128 CAGATGTCATGATATTGGATTGGGAAA 34154 ||||| ||||| || | || ||||||| Sbjct 22979 CAGATATCATGGTACTCGA-TGGGAAA 23004 >seq18 Length=146158383 Score = 232 bits (256), Expect = 8e-56 Identities = 412/593 (69%), Gaps = 15/593 (3%) Strand=Plus/Plus Query 33567 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCG 33626 || || ||||||| | | || || ||||| | |||||||||||| ||||| | || Sbjct 66703337 TGCTTGAACATCAGGTAGACAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 66703396 Query 33627 TTAGAAAAC-GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAA 33685 || ||||| || || || ||||| || || | || || ||||| ||||| || || || Sbjct 66703397 TTGGAAAAATGTAAGGCCCGGCATCAGTCCCTGTTTCTTGAGCCAGAATATCGATGCAAA 66703456 Query 33686 TGATCCGGAAAA-GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA-- 33742 || || ||||| ||||||| ||||||| || |||||||| | || || ||| |||| Sbjct 66703457 AGAACCAGAAAAAGAAGATTGCTTCTACCGCGGCAAAGGCCACAACTCGTTCTGCATATG 66703516 Query 33743 -ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 33801 | | | |||| |||| | ||||| || ||||||| |||| |||| Sbjct 66703517 TAGCTTCTTTGTCCCCAGTCCAATGCAAGGCCCAGTCAGCCTTCT------CACA-GGCA 66703569 Query 33802 TCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGA 33861 | ||||| || ||||| || ||||| | | |||| || | |||||||| ||||| || | Sbjct 66703570 TTGTTTCAATAGCATTGAAAAGATATTCTCTTTCTTTGCGATCTTTAATGTAAGTGTCAA 66703629 Query 33862 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 33921 | | ||||||||||||| || || ||| || ||| | | || || || || |||| Sbjct 66703630 TAAGGAGACTATACATTTTAGAGTGTATGCTTCTCATGCCAGTTTGGAAGCCATA-AAAC 66703688 Query 33922 ATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTA 33981 | | |||||| |||| || | |||| | |||||| || | || ||| |||| | || Sbjct 66703689 AGCCAGCCTCTGTAACTTGAATTTCTTGGCTAAATCGCTCCACCAAGTTTGCATTGAGTA 66703748 Query 33982 TTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTG 34041 | |||||||| |||||||| || |||| | || |||||||| | | || || ||| Sbjct 66703749 TGCCATCACTTGCTGCAAAGAAAGCCAGAATGTGAGCTATAAAATGTCTCTCATCGGGT- 66703807 Query 34042 TTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATG 34101 || |||| | ||||||| || || | ||||| || || | |||||||| | Sbjct 66703808 TTCACAGCTTCCCAGTGCTGATATCCTTGGAAAGGTCCACCTCCTCAGCAGTCCAAAAGG 66703867 Query 34102 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 34154 ||||| || || | ||||| | |||||| ||||| || | || ||||||| Sbjct 66703868 TGGCCTCAGCTTTCCTGTACATCTGCCAGATATCATGGTACTAGA-TGGGAAA 66703919 >seq6 Length=112758220 Score = 132 bits (146), Expect = 6e-26 Identities = 197/281 (70%), Gaps = 19/281 (7%) Strand=Plus/Minus Query 33567 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCG 33626 || || ||||||| || || || || ||||| | |||||||||||| ||||| | || Sbjct 9090762 TGCTTGAACATCAGGCAGGCAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 9090703 Query 33627 TTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33686 || |||| || || || ||||| || || || || || ||||| ||| | || || || Sbjct 9090702 TTGGAAAGTGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCAGAATCTTGATGCAAAA 9090643 Query 33687 GATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAA-CC 33745 || ||||||||||||||||||||||| | |||||||| | || ||| | ||| || || Sbjct 9090642 GAACCGGAAAAGAAGATTCCTTCTACGGTGGCAAAGGCCACAACTCTTTGTCCCCAATCC 9090583 Query 33746 GGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 |||| |||||| || ||| ||| || |||||||| || || Sbjct 9090582 AGCGC-----------------AAAGCCCAGTCAGCCGCCTTCTTCACACAAGG-ATGGT 9090541 Query 33806 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 33846 ||| || ||||| |||| ||| | | |||| || ||||| Sbjct 9090540 TTCAATAGCATTGAAGAAATATTCTCTTTCCTTGGGATCTT 9090500 Score = 102 bits (112), Expect = 1e-16 Identities = 124/167 (74%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCT--TGAGACATAACTCCCATTTT 33292 ||| |||||| |||| || | |||| ||| ||| || | ||||| ||||||||| | Sbjct 9090302 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAATTCGACATGACTCCCATTCT 9090361 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 9090362 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 9090421 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCA 33399 |||||| ||||||||||| || || |||| || ||||| |||| Sbjct 9090422 CATGAAGTCAAACGGATTTTCTACTCTGAAAATCTTGTTAAAACCCA 9090468 >seq22 Length=147524369 Score = 116 bits (128), Expect = 5e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || ||||| || ||||| ||||| |||||||| || ||||||||||| || || | Sbjct 105169247 ACCTGAAATTCCCCTGACAAGACTCTGCGAGTGTAGATGTTACTGGTATAAGGCTCAATG 105169188 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 ||||||||||| |||| ||| || |||||||| ||||| ||||| || || | | |||| Sbjct 105169187 GACTCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 105169128 Query 62508 CTATTTCTAAGACCGTA 62524 || ||||| | ||| || Sbjct 105169127 CTGTTTCTTATACCATA 105169111 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 62619 GATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAAT 62678 ||||| |||| || ||||| || || | || || ||||| | ||| || || || | Sbjct 105166029 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTGGCTAGCTCACAGCTGGCTTCCAGG 105165970 Query 62679 GCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCA 62738 || || || ||||||||||||||||||| |||||||| || ||||| ||||| ||| Sbjct 105165969 GCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTCA 105165910 Query 62739 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62798 || || || | | || || || || || ||||| ||||| || ||||| || || || Sbjct 105165909 AAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGC 105165850 Query 62799 CTATGTCTCTTATTAGA 62815 | ||| | ||||| || Sbjct 105165849 CGATGGCGTTTATTTGA 105165833 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722 || || ||||| || | |||||||| || || |||||||| || ||||||||||| ||| Sbjct 105156131 GTCCCGGCATTGAAGAGAGTAGGAGAGGCATGAGTAAACCACTTCTCAGAAAGTAGGTTG 105156072 Query 63723 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63782 || || ||||| || | || ||||| || ||||| || || | || | ||| ||| Sbjct 105156071 TAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATCCCCACAGAAACCCTCATCAAC 105156012 Query 63783 ATGTGCTGAGGTCTTTCA 63800 |||||||| ||||||||| Sbjct 105156011 ATGTGCTGTGGTCTTTCA 105155994 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| ||||| || |||||||| || |||||| || | || || || |||||||| | Sbjct 105172285 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 105172226 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 | | ||| || || ||||||||||| || || || || || ||||| || | | |||| Sbjct 105172225 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 105172166 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 | || | |||||||| | || ||||| | | |||| | || || |||| Sbjct 105172165 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 105172115 >seq4 Length=117747451 Score = 116 bits (128), Expect = 5e-21 Identities = 173/245 (71%), Gaps = 9/245 (4%) Strand=Plus/Plus Query 162548 TAGAGAGAGATATAGAAAAGTATATCCAAAAACTTCCTGTTGTGCATTTCTGCAAGAAAA 162607 ||||||| || ||||||||||| |||||| | || ||||| || ||||| || | | Sbjct 78042804 TAGAGAGTGAAATAGAAAAGTACATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGA 78042863 Query 162608 AAGAGGACATCAAGTACGCATGTAGATTCATCAAGGTGTATAAACCTGGTGATGAGACTA 162667 | ||| | ||||||||| || | ||||||| | ||| | ||| | || | || | Sbjct 78042864 AGGAGAAGATCAAGTACAAGTGCAAATTCATCGAAGTGCACAAATCCGGAGCTGTG---- 78042919 Query 162668 CCTCGACATATGTGTGCGCAATCAAAGTGGAAAGATGCTGCTGTGCTGTGTTTGCGGATT 162727 | |||||||||| || ||| |||||| || | |||||||||||||||||| | Sbjct 78042920 --TGTGCATATGTGTGTGCGCTCAGAGTGGAGAGGTTCTGCTGTGCTGTGTTTGCTGCAG 78042977 Query 162728 GGCCAGAATCATGGTACATGGATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAAT 162787 ||| ||||| ||| || |||| | || || |||||| || | | |||| |||| Sbjct 78042978 AGCCTGAATCCTGGCACGTGGA---AGGCGGCTGTGTGAAGAGGTTTACCACAGAGGAAT 78043034 Query 162788 GGGTG 162792 ||||| Sbjct 78043035 GGGTG 78043039 Score = 98.7 bits (108), Expect = 1e-15 Identities = 230/344 (67%), Gaps = 15/344 (4%) Strand=Plus/Plus Query 162451 TTTGCCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAGTA 162510 ||||| ||||| | || ||||||||||||||||| | ||| || | || ||| | Sbjct 78484092 TTTGCAAACACTGAAGGGGGATATTTGTTCATTGGCTTGGATGGCAAAAACCAGAAAATT 78484151 Query 162511 ATTGGATTCACGGTG-GGTCACGACT-ACCTCAAACTGGTAGAGAGAGATATAGAAAAGT 162568 ||||| || | || | | || | | |||| || ||||||| || |||||||||| Sbjct 78484152 ATTGGTTT--TGATGCAGAGAAGAGTGATCTCATGCTTCTAGAGAGTGAAATAGAAAAGT 78484209 Query 162569 ATATCCAAAAACTTCCTGTTGTGCATTTCTGCAAGAAAAAAGAGGACATCAAGTACGCAT 162628 |||||| || ||||| || ||||| | | || ||| | || || ||| ||| Sbjct 78484210 GCATCCAAGGGCTGCCTGTCACTCACTTCTGTGGGGAGAAGGAGAAGATAAAATACACAT 78484269 Query 162629 GTAGATTCATCAAGGTGTATAAACCTGGTGATGAGACTACCTCGACATATGTGTGCGCAA 162688 | | |||||| | ||| | ||| | || | || | |||||||||| | Sbjct 78484270 GCAAGTTCATCGAAGTGCACAAATCCGGAGCTG--------TGTGCATATGTGTGTGTGC 78484321 Query 162689 TCAAAGTGGAAAGATGCTGCTGTGCTGTGTTTGCGGATTGGCCAGAATCATGGTACATGG 162748 ||| |||||| |||| ||||||||| ||||| || | ||| | || ||| |||||| Sbjct 78484322 TCAGAGTGGAGAGATTCTGCTGTGCAGTGTTCGCTGCAGAGCCCCAGTCCTGGCACATGG 78484381 Query 162749 ATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 162792 | | || || |||||| || | | |||| ||||||||| Sbjct 78484382 A---AGGCGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 78484422 >seq5 Length=114734182 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||||||||| ||||| | || || ||||| || || || ||||| || || || || | Sbjct 21262837 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 21262778 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || ||||||||||||||||||||||| || ||||||| Sbjct 21262777 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 21262718 Query 33724 C 33724 | Sbjct 21262717 C 21262717 Score = 89.7 bits (98), Expect = 6e-13 Identities = 104/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCT--TGAGACATAACTCCCATTTT 33292 ||| |||||| |||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 21263925 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAATTCGACATGACTCCCATCCT 21263866 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 21263865 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 21263806 Query 33353 CATGAAATCAAACGGATT 33370 |||||| ||||||||||| Sbjct 21263805 CATGAAGTCAAACGGATT 21263788 >seq8 Length=97450195 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || || || || || | ||| || ||||| || ||||| ||||| ||||| | ||| || Sbjct 32799293 TCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGTCCAGGCATGAGGCCTCTCTTCTTT 32799352 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33725 ||||| ||||| | ||| |||||||| || ||||| |||||||| || ||||||||||| Sbjct 32799353 AGCCAGAATATTGCAGCAAATGATCCAGAGAAGAAAATTCCTTCCACAGCAGCAAAGGCC 32799412 Query 33726 ATAAGTCTCTCTCC 33739 | | |||||| || Sbjct 32799413 ACCACTCTCTCCCC 32799426 >seq3 Length=122627250 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 ||||| |||||||||| | | ||| | ||||| || || ||||||||||||| ||| Sbjct 112844508 GTTACCTTCTATGATGTATATCTGGTTCTGCAAGCGTTTATAATGACTACTGCAGTCTTT 112844567 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| ||||| | | |||||||||||||||||||||||||| ||| | | | |||| Sbjct 112844568 CTTGGCTTGACTGCCTATACTCTACAATCAAAGAGAGATTTCACCAAATTCGGAGCAGG 112844626 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/69 (88%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232 |||| ||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||| Sbjct 112830835 GCTCGTCCATCGAGGATGACTTCAACTATGGCAGCTGCGTGGCGTCGGCCAGCGTGCACA 112830894 Query 188233 TACGAATGG 188241 | || |||| Sbjct 112830895 TCCGCATGG 112830903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629792706459360