Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq19 109 5e-19 >seq19 Length=145277780 Score = 109 bits (120), Expect = 5e-19 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 20990 CAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGG 21049 |||||| |||| || || |||| || || || || || |||||||| ||||| || || Sbjct 24628055 CAGGCCTGTGATATGTGCAATCATGTAGGTGAGCAGAGCATAGCTGGCAATGTTGAAGGG 24628114 Query 21050 GACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGC 21109 || || || ||||| || | ||||||||||| |||||||| || |||||||| | Sbjct 24628115 CACACCCAGACCCATATCTCCTGACCTCTGGTAAAGCTGGCAAGATAGCTCCCCATTCAC 24628174 Query 21110 CACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC 21152 ||| || |||||||| | | || |||||||| || |||||| Sbjct 24628175 CACATAGAACTGACAGAGGGCATGGCAAGGAGGCAGTGCCATC 24628217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427759514849760