Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq2669 419 3e-112 seq18 253 3e-62 seq6 147 3e-30 seq5 129 8e-25 seq4 114 2e-20 seq22 113 6e-20 >seq2669 Length=49141 Score = 419 bits (464), Expect = 3e-112 Identities = 658/929 (71%), Gaps = 17/929 (2%) Strand=Plus/Plus Query 49614 TTAAAAGTCAACATCTAGAGAAAAATGATTATCT-TCT--TGAGACATAACTCCCATTTT 49670 ||| |||||| |||| | | |||| ||| ||| || | ||||| |||||||| | Sbjct 22083 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAATTCGACATGACTCCCATCCT 22142 Query 49671 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 49730 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 22143 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 22202 Query 49731 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 49790 |||| | ||||||||||| || | |||| || ||||| |||| || || | Sbjct 22203 CATGCAGTCAAACGGATTTTCTACTCTGAAAATCTTGTTAAAACCCAGCTCCAGCATAAG 22262 Query 49791 TCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 49850 || || || ||||| || ||||| ||||||| ||||||||||| || || || Sbjct 22263 CCTGTCGGCCACAAACTCAATATACTGCTTCATCAAAGTGCAATTCATTCCGATGAGCTT 22322 Query 49851 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 49910 || || | ||| | | || || || || || || || || | || || || Sbjct 22323 CACGGGCAAGGCCTCCGGGAGGAACTCCTGCTCTATCC-TAACG--TTGGTGATTATCTC 22379 Query 49911 TCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAAAT 49969 ||| || | | || | || | | | || | | || || ||||||| || || || | Sbjct 22380 TCTGACCCTCTGCTCCGCTGGCTTG-TGTACCAGGTGCTTGAACATCAGGCAGGCAAAGT 22438 Query 49970 CGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTA 50029 | ||||| | |||||||||||||||||| || || |||||||| || || || ||||| | Sbjct 22439 CACAGTGTAAACCCTCGTCTCTACTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCA 22498 Query 50030 GGCCACGCTTT-TTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCT 50088 | || | ||| || ||||| ||||| || ||||| || || |||||||||||||||||| Sbjct 22499 GCCCCCCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCT 22558 Query 50089 ACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTG- 50147 || ||||||||||| |||| | |||||||| | || || | ||| ||| | | Sbjct 22559 ACAGCGGCAAAGGCCACAACGCGTTCTCCATACGTAGC-CTCT-TTGTCCCCAGTCCAGC 22616 Query 50148 ----AGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 ||||| || |||||||| || ||||||||||||||||| || ||||| ||||||| Sbjct 22617 GCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATCGTTTCAATAGCATTGAAGAGAT 22676 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 | | | |||| || |||||||| ||||| || || | |||| |||||||| || | Sbjct 22677 ATTCTCTTTCCTTGGGATCTTTAATGTAAGTGTCAATAAGGGGACTGTACATTTCAGAGT 22736 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | |||||||| ||||| || || || || |||||||| | ||||| |||| || |||| Sbjct 22737 GTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACTTGAACTT 22796 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 || | |||||| || | || || ||||| ||||| || ||||| |||||||| || | Sbjct 22797 CTTGGCTAAATCGCTCCACCAAGTTCTCATTGACTATGCCATCACTCGCTGCAAAGAAAG 22856 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATAT 50443 ||| ||||| |||||||||| | || | |||| | || | ||| | | |||| Sbjct 22857 CCAGAACATGAGATATAAAATGTCTCTCATCGGGTTTCAGAGCCTCCCAGTGCTGAATAT 22916 Query 50444 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 50503 | || || | || || || || | |||||||| || ||||| || || || ||||| | Sbjct 22917 CCTTGGAAAGGTCCACCTCCTCGGCAGTCCAAAAGGAGGCCTCGGCTTTCTTGTACATCT 22976 Query 50504 TCCAGATGTCATGATATTGGATTGGGAAA 50532 |||||| ||||| || | || ||||||| Sbjct 22977 GCCAGATATCATGGTACTCGA-TGGGAAA 23004 >seq18 Length=146158383 Score = 253 bits (280), Expect = 3e-62 Identities = 417/593 (70%), Gaps = 15/593 (3%) Strand=Plus/Plus Query 49945 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 50004 || || ||||||| | | || || ||||| | |||||||||||| ||||| || || Sbjct 66703337 TGCTTGAACATCAGGTAGACAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 66703396 Query 50005 TTGGAAAAC-GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 50063 |||||||| || || || ||||| || || | || || ||||| ||||| || ||||| Sbjct 66703397 TTGGAAAAATGTAAGGCCCGGCATCAGTCCCTGTTTCTTGAGCCAGAATATCGATGCAAA 66703456 Query 50064 TGACCCAGAAAA-GAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAAC 50122 || |||||||| ||||||| ||||||| ||||||||||| |||| || ||| |||| Sbjct 66703457 AGAACCAGAAAAAGAAGATTGCTTCTACCGCGGCAAAGGCCACAACTCGTTCTGCATATG 66703516 Query 50123 TGGCGC---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCA 50179 | || |||| |||| | ||||| || ||||||| |||| |||| Sbjct 66703517 TAGCTTCTTTGTCCCCAGTCCAATGCAAGGCCCAGTCAGCCTTCT------CACA-GGCA 66703569 Query 50180 TCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGA 50239 | ||||| || ||||| || ||||| | | |||| || | |||||||| ||||| || | Sbjct 66703570 TTGTTTCAATAGCATTGAAAAGATATTCTCTTTCTTTGCGATCTTTAATGTAAGTGTCAA 66703629 Query 50240 TCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAAC 50299 | | ||||||||||||| || || ||| || ||| | | || || || || |||| Sbjct 66703630 TAAGGAGACTATACATTTTAGAGTGTATGCTTCTCATGCCAGTTTGGAAGCCATA-AAAC 66703688 Query 50300 ATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTA 50359 | | |||||| |||| || | |||| | |||||| || | || ||| |||| | || Sbjct 66703689 AGCCAGCCTCTGTAACTTGAATTTCTTGGCTAAATCGCTCCACCAAGTTTGCATTGAGTA 66703748 Query 50360 TTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTG 50419 | || ||||| |||||||| || |||| | || |||||||||| | || | |||| Sbjct 66703749 TGCCATCACTTGCTGCAAAGAAAGCCAGAATGTGAGCTATAAAATGTCTCTCATCGGGT- 66703807 Query 50420 TTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATG 50479 || |||| | ||||||| || || | || || || || | |||||||| | Sbjct 66703808 TTCACAGCTTCCCAGTGCTGATATCCTTGGAAAGGTCCACCTCCTCAGCAGTCCAAAAGG 66703867 Query 50480 ATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 50532 ||||| || || | ||||| | |||||| ||||| || | || ||||||| Sbjct 66703868 TGGCCTCAGCTTTCCTGTACATCTGCCAGATATCATGGTACTAGA-TGGGAAA 66703919 >seq6 Length=112758220 Score = 147 bits (162), Expect = 3e-30 Identities = 199/280 (71%), Gaps = 17/280 (6%) Strand=Plus/Minus Query 49945 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 50004 || || ||||||| || || || || ||||| | |||||||||||| ||||| || || Sbjct 9090762 TGCTTGAACATCAGGCAGGCAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 9090703 Query 50005 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 50064 ||||||| || || || ||||| || || || || || ||||| ||| | || ||||| Sbjct 9090702 TTGGAAAGTGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCAGAATCTTGATGCAAAA 9090643 Query 50065 GACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTG 50124 || || |||||||||||||||||||| | ||||||||| |||| ||| | ||| | Sbjct 9090642 GAACCGGAAAAGAAGATTCCTTCTACGGTGGCAAAGGCCACAACTCTTTGTCCCCA---- 9090587 Query 50125 GCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 50184 ||||| |||||| || ||| ||| || |||||||| || ||| Sbjct 9090586 ------------ATCCAGCGCAAAGCCCAGTCAGCCGCCTTCTTCACACAAGG-ATGGTT 9090540 Query 50185 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 50224 || || ||||| |||| ||| | | |||| || ||||| Sbjct 9090539 TCAATAGCATTGAAGAAATATTCTCTTTCCTTGGGATCTT 9090500 Score = 93.3 bits (102), Expect = 6e-14 Identities = 122/167 (73%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 49614 TTAAAAGTCAACATCTAGAGAAAAATGATTATCT-TCT--TGAGACATAACTCCCATTTT 49670 ||| |||||| |||| | | |||| ||| ||| || | ||||| ||||||||| | Sbjct 9090302 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAATTCGACATGACTCCCATTCT 9090361 Query 49671 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 49730 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 9090362 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 9090421 Query 49731 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCA 49777 |||||| ||||||||||| || | |||| || ||||| |||| Sbjct 9090422 CATGAAGTCAAACGGATTTTCTACTCTGAAAATCTTGTTAAAACCCA 9090468 >seq5 Length=114734182 Score = 129 bits (142), Expect = 8e-25 Identities = 104/126 (83%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||||||||| ||||| || || |||||||| || || || ||||| || || || || | Sbjct 21262837 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 21262778 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| || ||||| || || |||||||||||||||||||| |||||||||| Sbjct 21262777 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 21262718 Query 50102 CAACAA 50107 | |||| Sbjct 21262717 CCACAA 21262712 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 49614 TTAAAAGTCAACATCTAGAGAAAAATGATTATCT-TCT--TGAGACATAACTCCCATTTT 49670 ||| |||||| |||| | | |||| ||| ||| || | ||||| |||||||| | Sbjct 21263925 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAATTCGACATGACTCCCATCCT 21263866 Query 49671 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 49730 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 21263865 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 21263806 Query 49731 CATGAAATCAAACGGATT 49748 |||||| ||||||||||| Sbjct 21263805 CATGAAGTCAAACGGATT 21263788 >seq4 Length=117747451 Score = 114 bits (126), Expect = 2e-20 Identities = 234/344 (68%), Gaps = 13/344 (4%) Strand=Plus/Plus Query 183108 TTTGCCAACACGGATGGTGGATATTTGTTCATTGGAGTTGATAATAATACACA-CAAAGT 183166 ||||| ||||| ||||| |||| |||||||||||| | ||| || || || |||| | Sbjct 78042707 TTTGCAAACACAGATGGGGGATTTTTGTTCATTGGTTTGGATGGCAAAACCCAGCAAATT 78042766 Query 183167 AGTTGGATTCACGGTGGGTCAAGACT-ACCTCAAACTGGTAGAGAGTGATATAGAAAAGT 183225 | | | || | | | |||| | |||| |||||||||| |||||||||| Sbjct 78042767 ATTGGTTTTGAAGCAAAG--AAGAGTGACCTTGTGTGTCTAGAGAGTGAAATAGAAAAGT 78042824 Query 183226 ATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACGCGT 183285 | ||| || || | ||| || ||||||||| |||| ||| | ||||||||| || Sbjct 78042825 ACATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACAAGT 78042884 Query 183286 GTCGATTCATCAAGGTGTATAAACCTGGGGAGGAGACTACCTCGACATACGTGTGCGCTA 183345 | ||||||| | ||| | ||| | || | || | |||| ||||| || Sbjct 78042885 GCAAATTCATCGAAGTGCACAAATCCGGAG------CTGTGTGTGCATATGTGTGTGCGC 78042938 Query 183346 TCAAAGTGGAAAGATGCTGCTGTGCCGTGTTTGCAGATTGGCCAGAATCATGGTACATGG 183405 ||| |||||| || | ||||||||| |||||||| | ||| ||||| ||| || ||| Sbjct 78042939 TCAGAGTGGAGAGGTTCTGCTGTGCTGTGTTTGCTGCAGAGCCTGAATCCTGGCACGTGG 78042998 Query 183406 ATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 183449 | | || || |||||| || | | |||| ||||||||| Sbjct 78042999 A---AGGCGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 78043039 Score = 109 bits (120), Expect = 8e-19 Identities = 233/344 (68%), Gaps = 13/344 (4%) Strand=Plus/Plus Query 183108 TTTGCCAACACGGATGGTGGATATTTGTTCATTGGAGTTGATAATAATACACA-CAAAGT 183166 ||||| ||||| || || ||||||||||||||||| | ||| || || || |||| | Sbjct 78088738 TTTGCAAACACTGAAGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACCCAGCAAATT 78088797 Query 183167 AGTTGGATTCACGGTGGGTCAAGA-CTACCTCAAACTGGTAGAGAGTGATATAGAAAAGT 183225 | | | || | | | | |||| | | ||| || |||||||||| |||||||||| Sbjct 78088798 ATTGGTTTTGAAGCAGAG--AAGAGCGATCTCCTGCTTCTAGAGAGTGAAATAGAAAAGT 78088855 Query 183226 ATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACGCGT 183285 ||| || || | ||| || ||||||| | |||| ||| | || || ||| | | Sbjct 78088856 GCATCCAACAGCTGCCTGTCACTCACTTCTGTGGGGAGAAGGAGAAGATAAAATACACAT 78088915 Query 183286 GTCGATTCATCAAGGTGTATAAACCTGGGGAGGAGACTACCTCGACATACGTGTGCGCTA 183345 | ||||||| | || | ||| | || | || | |||| ||||| || Sbjct 78088916 GCAAATTCATCGAAGTACACAAATCCGGAG------CTGTGTGTGCATATGTGTGTGCGC 78088969 Query 183346 TCAAAGTGGAAAGATGCTGCTGTGCCGTGTTTGCAGATTGGCCAGAATCATGGTACATGG 183405 ||| |||||| |||| ||||||||| ||||| || | ||| ||||| ||| || ||| Sbjct 78088970 TCAGAGTGGAGAGATTCTGCTGTGCAGTGTTCGCTGCGGAGCCTGAATCCTGGCACGTGG 78089029 Query 183406 ATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 183449 | |||| || |||||| || | | |||| ||||||||| Sbjct 78089030 A---AGGTGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 78089070 Score = 100 bits (110), Expect = 4e-16 Identities = 234/347 (67%), Gaps = 21/347 (6%) Strand=Plus/Plus Query 183108 TTTGCCAACACGGATGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAGTA 183167 ||||| ||||| || || ||||||||||||||||| | ||| || | || ||| | Sbjct 78484092 TTTGCAAACACTGAAGGGGGATATTTGTTCATTGGCTTGGATGGCAAAAACCAGAAAATT 78484151 Query 183168 GTTGGATTCACGGTG-GGTCAAGACT-ACCTCAAACTGGTAGAGAGTGATATAGAAAAGT 183225 |||| || | || | |||| | | |||| || |||||||||| |||||||||| Sbjct 78484152 ATTGGTTT--TGATGCAGAGAAGAGTGATCTCATGCTTCTAGAGAGTGAAATAGAAAAGT 78484209 Query 183226 ATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACGCGT 183285 ||| || | || | ||| || ||||||| | |||| ||| | || || ||| | | Sbjct 78484210 GCATCCAAGGGCTGCCTGTCACTCACTTCTGTGGGGAGAAGGAGAAGATAAAATACACAT 78484269 Query 183286 GTCGATTCATCAAGGTGTATAAACCTGGGGAGGAGACTACCTCGACATACGTGTGCGCTA 183345 | |||||| | ||| | ||| | || | || | |||| ||||| | Sbjct 78484270 GCAAGTTCATCGAAGTGCACAAATCCGGAG------CT--GTGTGCATATGTGTGTGTGC 78484321 Query 183346 TCAAAGTGGAAAGATGCTGCTGTGCCGTGTT---TGCAGATTGGCCAGAATCATGGTACA 183402 ||| |||||| |||| ||||||||| ||||| |||||| ||| | || ||| ||| Sbjct 78484322 TCAGAGTGGAGAGATTCTGCTGTGCAGTGTTCGCTGCAGA---GCCCCAGTCCTGGCACA 78484378 Query 183403 TGGATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 183449 |||| | || || |||||| || | | |||| ||||||||| Sbjct 78484379 TGGA---AGGCGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 78484422 >seq22 Length=147524369 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || |||||||| || ||||| ||||| |||||||| || ||||||||||| || || | Sbjct 105169247 ACCTGAAATTCCCCTGACAAGACTCTGCGAGTGTAGATGTTACTGGTATAAGGCTCAATG 105169188 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || |||||||| |||| ||| || |||||||| || || ||||| || || | | |||| Sbjct 105169187 GACTCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 105169128 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 105169127 CTGTTTCTTATACCATA 105169111 Score = 100 bits (110), Expect = 4e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 || |||||||| || || | || | ||||| ||||| || || || | ||||| || Sbjct 105166020 TACGTTTCATAGGGGCCATACTCCTTGGCTAGCTCACAGCTGGCTTCCAGGGCTCCATAG 105165961 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||||||||| || |||| |||||| | || |||||| |||| ||||| || || Sbjct 105165960 TAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTCAAAGGGGTAT 105165901 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 | | || || || || |||||||| ||||| || ||||| || || || | ||| | Sbjct 105165900 CTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGCCGATGGCGT 105165841 Query 79480 TTATTAGA 79487 ||||| || Sbjct 105165840 TTATTTGA 105165833 Score = 96.9 bits (106), Expect = 5e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 80394 || || ||||| || | |||||||| || || |||||||| || ||||| ||||| ||| Sbjct 105156131 GTCCCGGCATTGAAGAGAGTAGGAGAGGCATGAGTAAACCACTTCTCAGAAAGTAGGTTG 105156072 Query 80395 TACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAAC 80454 || || ||||| || | || ||||| || ||||| || || | || | ||| ||| Sbjct 105156071 TAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATCCCCACAGAAACCCTCATCAAC 105156012 Query 80455 ATGTGCTGAGGTCTTTCA 80472 |||||||| ||||||||| Sbjct 105156011 ATGTGCTGTGGTCTTTCA 105155994 Score = 96.9 bits (106), Expect = 5e-15 Identities = 124/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| |||||||| || |||||| || | || || || |||||||| | Sbjct 105172285 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 105172226 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 | | ||| || || ||||||||||| || || || || || ||||| || | | |||| Sbjct 105172225 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 105172166 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | |||||||| | || ||||| | | |||| | || || |||| Sbjct 105172165 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 105172115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718240410425680