Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2669 221 3e-52 seq14 167 5e-36 seq8 161 2e-34 seq22 158 3e-33 seq4 143 6e-29 seq25 140 7e-28 seq9 138 3e-27 seq19 125 2e-23 seq18 116 9e-21 seq6 114 3e-20 seq23 113 1e-19 seq5 84.2 5e-11 >seq2669 Length=49141 Score = 221 bits (244), Expect = 3e-52 Identities = 604/914 (66%), Gaps = 16/914 (2%) Strand=Plus/Minus Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788 |||||| ||| ||||||||| | |||| || || |||||||||| || || || || Sbjct 22987 TGATATCTGGCAGATGTACAAGAAAGCCGAGGCCTCCTTTTGGACTGCCGAGGAGGTGGA 22928 Query 268789 TCTGTCTTATGACTTAAT-AG-ATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATA 268846 || || | || || | || | ||| | | | ||||| || || ||| |||||| Sbjct 22927 CCTTTCCAAGGA--TATTCAGCACTGGGAGGCTCTGAAACCCGATGAGAGACATTTTATA 22870 Query 268847 TCTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAG 268906 ||| || |||| || || ||||||| |||||||| || || || || || | || ||| Sbjct 22869 TCTCATGTTCTGGCTTTCTTTGCAGCGAGTGATGGCATAGTCAATGAGAACTTGGTGGAG 22810 Query 268907 AAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCT 268966 || | ||||| || || || | || ||| | ||||| || || ||||| || || Sbjct 22809 CGATTTAGCCAAGAAGTTCAAGTTACAGAGGCCCGCTGTTTCTATGGCTTCCAAATTGCC 22750 Query 268967 ATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAAC 269026 || ||||| || || || || |||||||||| | || || ||||| || | ||| | Sbjct 22749 ATGGAAAACATACACTCTGAAATGTACAGTCCCCTTATTGACACTTACATTAAAGATCCC 22690 Query 269027 AACGAAAAGAAAAGA-CTATTTTCTTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTC 269085 || |||| || || | || || | |||| ||| ||| ||||||| || || | Sbjct 22689 AAGGAAA-GAGAATATCTCTTCAATGCTATTGAAACGATGCCTTGTGTGAAGAAGAAGGC 22631 Query 269086 TGAATGGGCTCTGAAATGGATAAACGATAGCGCGCCT---TACGGAGAAAGGTTAGTTGC 269142 ||| ||||| || |||| || | | | || || |||||| | | || || Sbjct 22630 TGACTGGGCCTTGCGCTGGACTGGGGACAAAGAGGCTACGTATGGAGAACGCGTTGTGGC 22571 Query 269143 TTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAA 269202 ||||||||||||||||| || |||||||| || |||||||| | || || ||| | || Sbjct 22570 CTTTGCCGCTGTAGAAGGAATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGGCTCAA 22511 Query 269203 GAAA-AGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAG 269261 |||| | || || ||||| || | || || || || || | || || || ||||| | Sbjct 22510 GAAACGGGGGGCTGATGCCGGGCCTTACATTTTCCAATGAGCTTATTAGTAGAGACGAGG 22451 Query 269262 GTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTC 269321 |||||||||| ||||| || || | | || || | || |||||| || | Sbjct 22450 GTTTACACTGTGACTTTGCCTGCCTGATGTT---CAAGCACCTGGTACACAAGCCAGCGG 22394 Query 269322 AAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGG 269381 | | || || || || || || | ||| |||| || || || ||| Sbjct 22393 AGCAGAGGGTCAGAGAGATAAT--CACCAAC-GTTAGGATAGAGCAGGAGTTCCTCCCGG 22337 Query 269382 AAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGT 269441 | || | | | | || ||||| |||||| ||| | ||||| | |||||| ||| Sbjct 22336 AGGCCTTGCCCGTGAAGCTCATCGGAATGAATTGCACTTTGATGAAGCAGTATATTGAGT 22277 Query 269442 TCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATC 269501 | || | || || | || || | || |||| || | | | || ||||||| Sbjct 22276 TTGTGGCCGACAGGCTTATGCTGGAGCTGGGTTTTAACAAGATTTTCAGAGTAGAAAATC 22217 Query 269502 CGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGG 269561 ||||| | ||||| ||||| ||| ||||||| ||| | || ||||| |||||||| | Sbjct 22216 CGTTTGACTGCATGGAAAATATCTCACTAGAAGGAAAGACAAACTTCTTTGAGAAGCGAG 22157 Query 269562 TAAGTAACTATCAGAAAATGGGTGTAATGTCTACTAAAGAAGAAAATATTTTCACTACAG 269621 || | | ||||||| ||||| || ||||| | | ||| ||| ||| || | Sbjct 22156 TAGGCGAGTATCAGAGGATGGGAGTCATGTCGAATTCGACAGAGAATTCTTTTACCTTGG 22097 Query 269622 ATGCAGAATTCTAA 269635 |||| || |||||| Sbjct 22096 ATGCTGACTTCTAA 22083 >seq14 Length=171410997 Score = 167 bits (184), Expect = 5e-36 Identities = 170/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 104342 AGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTA 104401 || || | ||| ||||| || || || || || ||||| || |||||||| | ||| | Sbjct 137735172 AGTCTCAATACCAGATGAAAGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGG 137735231 Query 104402 CCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCT 104461 | ||||| || || || |||||||| || |||||||| ||||||||||| |||||||| Sbjct 137735232 CTATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCC 137735291 Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 |||||||| |||| || ||||||||||||| || || ||||| ||||| || || Sbjct 137735292 TTATCCTGGGTCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTCAAGCGTG 137735351 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || || || ||||| || || ||||| ||||||||| || Sbjct 137735352 ATGGTTTTCCCCGTAAGGGTCTTCACAAAAATCTGCATTGTG 137735393 Score = 156 bits (172), Expect = 1e-32 Identities = 155/201 (77%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || || ||||| ||||| | || |||||||| || || || Sbjct 144150378 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCG 144150437 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || ||||| || || || ||||||||||| ||||| || || Sbjct 144150438 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 144150497 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| | ||| || || || || |||||||| || || ||||| || || || || Sbjct 144150498 ACGTTTTCAATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTC 144150557 Query 104543 TTTACAAATATCTGCATTTTG 104563 || || || |||||||||||| Sbjct 144150558 TTCACGAAGATCTGCATTTTG 144150578 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || |||||||| | ||| | || ||||| Sbjct 64263846 ACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCAGCCATCTTCC 64263905 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| || |||||||| |||||| ||| | |||||| ||||||| Sbjct 64263906 AGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAAGAGCAAGTCCTTCCTTATCCTAG 64263965 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| || || ||||| || || || | || | || Sbjct 64263966 ATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACTTCGAGCGAGATGGGTTTC 64264025 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || ||||| |||||||| Sbjct 64264026 CCCGTAAGGGTCTTCACAAAAATCTGCAT 64264054 Score = 98.7 bits (108), Expect = 2e-15 Identities = 122/167 (73%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | ||||| || || ||||| || |||||| | || || |||| Sbjct 86690316 ACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTAGTCAAA----GTATGGCCATCTTTC 86690261 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||| | || | |||||| ||||||||||| ||||||| |||| ||| Sbjct 86690260 AGCTGCTTGCCAGCACAGATCAACCTCTGCTGATCAGGAGGAATTCCTTTCTTATTCTGG 86690201 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAG 104517 ||||| || ||||||||||||| || || ||||| ||||| || Sbjct 86690200 ATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTCAAG 86690154 >seq8 Length=97450195 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || |||||||| | ||| | || ||||| Sbjct 30032866 ACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCC 30032925 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| || || ||||| ||||||||||| |||||||| |||||||| Sbjct 30032926 AGCTGCTTACCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 30032985 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| || || ||||| ||||| || || || || || Sbjct 30032986 ATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTC 30033045 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || ||||| |||||||| Sbjct 30033046 CCTGTAAGGGTCTTCACAAAGATCTGCAT 30033074 Score = 140 bits (154), Expect = 7e-28 Identities = 159/213 (75%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || |||||||| | ||| | || ||||| Sbjct 95921279 ACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCC 95921220 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||| ||| || |||||||| ||||||||||| ||||| |||||||| Sbjct 95921219 AGCTGCTTACCAGTAAAGATCAGCCTCTGCTGATCAGGAGGAATTCC----TTATCCTGG 95921164 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 |||| || ||||||||||||| || || ||||| ||||| | || || || || Sbjct 95921163 GTCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGGGCGTGATGGTTTTC 95921104 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || ||||| || || ||||| ||||||||| || Sbjct 95921103 CCCGTAAGGGTCTTCACAAAGATCTGCATTGTG 95921071 Score = 86.0 bits (94), Expect = 1e-11 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || |||||||| || || ||||| ||||||||||| ||| ||||| || ||| ||| Sbjct 5296969 TGCTTACCAGCAAAGATCAGGCTCTGCTGATCAGGAGGAGTTCTTTCTTCATTCTGGATC 5297028 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAG-GTTCTACCT 104513 || || ||||||||||||| ||||| | || |||| |||| Sbjct 5297029 TTGGCCTTTACATTTTCTATAGTATC-CAAGTGTTCAACCT 5297068 >seq22 Length=147524369 Score = 158 bits (174), Expect = 3e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || |||| || |||||||| | ||| | || ||||| Sbjct 124974675 ACCAGATGAAGGGTGGACTCCTTTTGAANGTTGTAGTCAGACAAAGTCCGGCCATCTTCC 124974616 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| || || ||||| ||||||||||| |||||||| |||||||| Sbjct 124974615 AGCTGCTTACCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 124974556 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| || || ||||| ||||| || || || || || Sbjct 124974555 ATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTC 124974496 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||||| || || ||||| |||||||| Sbjct 124974495 CCCGTAAGGGTCTTCACAAAGATCTGCAT 124974467 >seq4 Length=117747451 Score = 143 bits (158), Expect = 6e-29 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || ||||| || || | || ||||| || || || || Sbjct 57378919 GTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCG 57378860 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || ||||| || || || ||||||||||| ||||| || || Sbjct 57378859 GCAAAGATCAGCCTCTGNTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 57378800 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| | ||| || || || || |||||||| || || ||||| || || || || Sbjct 57378799 ACGTTTTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTC 57378740 Query 104543 TTTACAAATATCTGCATTTTG 104563 || || || |||||||||||| Sbjct 57378739 TTCACGAAGATCTGCATTTTG 57378719 Score = 87.8 bits (96), Expect = 4e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 |||| || || || | ||||| || | |||| || || || | || || || || Sbjct 55519187 AGATACAAGGTGGACTGGTTCTGGATGTAGCAGTCGGACAGGGTGCAGCCATCCTCCAGC 55519246 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 ||||| ||| | || | ||||||||||| ||| | || || ||||| | || || ||| Sbjct 55519247 TGTTTGCCATCGAACACCAGCCTCTGTTGGTCAAGTGGGATGCCTTCACTGTCTTGGATC 55519306 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || | || ||||| || | ||| || || || | ||||| || || || ||||| | Sbjct 55519307 TTGTCCTTGACATTCTCGATGGTGTCACTGGGCTTGACCTCAAGAGTGATGGTCTTGTCC 55519366 Query 104534 GTAAGTGTTTTTACAAATATCTGCATTTTGT 104564 || || || || || || |||||||| |||| Sbjct 55519367 GTCAGGGTCTTCACGAAGATCTGCATGTTGT 55519397 >seq25 Length=158037523 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || |||||||| || || || ||||| ||||| | || |||||||| || || || Sbjct 45424457 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCG 45424516 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || ||||| || || || ||||||||||| ||||| || || Sbjct 45424517 GCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTC 45424576 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || | | ||| || || || || ||||| || || || ||||| || || || || Sbjct 45424577 ACGTTCGCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 45424636 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 45424637 TTCACAAAGATCTGCAT 45424653 Score = 125 bits (138), Expect = 2e-23 Identities = 151/205 (74%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCG----TCTTCTAGTTGTTT 104418 || || | |||||| || || || ||||| ||||| | || |||||||| || || Sbjct 74175856 GTTGACTATTTCTGGATGTTGTAATCAGAGAGAGTACCTGCGGCCATCTTCTAGCTGCTT 74175797 Query 104419 TCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGC 104478 ||||||| || |||||||| || ||||| | || || ||||||||||| ||||| || Sbjct 74175796 GTCAGCAAAGATCAGCCTCTGCTGGTCAGGGGCGATGCCCTCTTTATCCTGGATCTTGGC 74175737 Query 104479 TTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAG 104538 ||| | ||| || | ||| || || || || |||||||| || || |||||| | || Sbjct 74175736 TTTCATATTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGATCTTACTGTTCAG 74175677 Query 104539 TGTTTTTACAAATATCTGCATTTTG 104563 || || || || |||||||||||| Sbjct 74175676 GGTCTTCACGAAGATCTGCATTTTG 74175652 Score = 125 bits (138), Expect = 2e-23 Identities = 161/221 (73%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 104341 TAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCT 104400 ||||| || || || || | || || |||||||| | || || ||||| || || | Sbjct 146223648 TAGCCAGAGGACCAGGTGCAGGGTCGACTCTTTCTGGTTGTTGTAATCAGAGAGGGTGCG 146223707 Query 104401 ACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTC 104460 || ||||| ||||| || || ||||| || |||||||| || || |||| || | || Sbjct 146223708 GCCATCTTCCAGTTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAG--ATGGCCTC 146223765 Query 104461 TTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGT 104520 ||||||||| ||||| || || || || || | ||| || || || || | |||||| || Sbjct 146223766 TTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTTTCACTGGGCTCCATCTCTAGGGT 146223825 Query 104521 AATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTT 104561 || ||||| ||||| || || || | || |||||||||| Sbjct 146223826 GATGGTCTTGCCAGTTAGGGTCTTCATGAAGATCTGCATTT 146223866 Score = 93.3 bits (102), Expect = 1e-13 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || || || | || || || || | || || || ||||| || || || ||| Sbjct 45424652 ATGCCACCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAATCA 45424711 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | || ||||| || || || |||||||| || |||||||| || ||||| Sbjct 45424712 GAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGG 45424771 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTC 104490 || || || ||||||||||| ||||| || || | || ||| Sbjct 45424772 GGGATGCCCTCTTTATCCTGGATCTTGGCCTTCAGATCTTC 45424812 >seq9 Length=92629107 Score = 138 bits (152), Expect = 3e-27 Identities = 159/213 (75%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || | ||||| || |||||||| | ||| | || ||||| Sbjct 13458703 ACCAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCC 13458644 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| | |||||||| |||||||||| | |||| ||| | |||| Sbjct 13458643 AGCTGCTTACCAGCAAAGACCAGCCTCTGGTGATCAGGAGCAAGTCCTCCTTAA-CCTGG 13458585 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| ||| || |||| ||||| || || || ||||| Sbjct 13458584 ATCTTGGCCTTTACATTTTCTATGGTGTCCAGGGGTTTAACCTCGAGCGTGATGGTCTTC 13458525 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || |||| || || ||||| ||||||||| || Sbjct 13458524 CCCATAAGGGTCTTCACAAAAATCTGCATTGTG 13458492 Score = 123 bits (136), Expect = 6e-23 Identities = 153/209 (73%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || | ||||| || |||||| | || | || ||||| Sbjct 13017539 ACAAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAAA----GTCCGGCCATCTTCC 13017484 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| | |||||||| |||||||||| | |||||| |||||||| Sbjct 13017483 AGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGCAAGTCCTTCCTTATCCTGG 13017424 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| || | ||||| ||||| || || || ||||| Sbjct 13017423 ATCTTGGCCTTTACATTTTCTATAGTGTTTGAGGGTTCAACCTCAAGCGTGATGGTCTTC 13017364 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || ||| || || ||||| |||||||| Sbjct 13017363 CCCAAAAGGGTCTTCACAAAAATCTGCAT 13017335 >seq19 Length=145277780 Score = 125 bits (138), Expect = 2e-23 Identities = 149/201 (74%), Gaps = 1/201 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || || ||||| || || | || ||||| || || || ||| Sbjct 136501857 GTCGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 136501916 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || |||||||| || ||||| || || || ||||||||||| ||||| || || Sbjct 136501917 GCAAAGATCAGCCTCTGCTGGTCAGGGGG-ATGCCCTCTTTATCCTGGATCTTGGCCTTC 136501975 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || || || || ||||| || || || ||||| | || || || Sbjct 136501976 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCTGGTCAGGGTC 136502035 Query 104543 TTTACAAATATCTGCATTTTG 104563 || | || |||||||||||| Sbjct 136502036 TTCAGGAAGATCTGCATTTTG 136502056 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 104462 TTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTA 104521 || ||||| |||||||| || ||||| || | ||| || || || || ||||| || || Sbjct 118356215 TTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCCAGGGTG 118356274 Query 104522 ATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTGT 104566 || ||||||||||| | ||||| ||||| ||||||||| | ||| Sbjct 118356275 ATGGTCTTACCAGTTAAGGTTTTCACAAAGATCTGCATTGTCTGT 118356319 >seq18 Length=146158383 Score = 116 bits (128), Expect = 9e-21 Identities = 367/557 (66%), Gaps = 20/557 (4%) Strand=Plus/Minus Query 268729 TGATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGA 268788 |||||| ||| |||||||| | || | || | |||||||||| || || || || Sbjct 66703902 TGATATCTGGCAGATGTACAGGAAAGCTGAGGCCACCTTTTGGACTGCTGAGGAGGTGGA 66703843 Query 268789 TCTGTCTTATGACTTAATAG-ATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATAT 268847 || || | || || || | ||| || | | ||||| || || ||| |||||| Sbjct 66703842 CCTTTCCAAGGA--TATCAGCACTGGGAAGCTGTGAAACCCGATGAGAGACATTTTATAG 66703785 Query 268848 CTTATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGA 268907 || | ||||| || || ||||||| |||||||| || | || | ||| | || ||| Sbjct 66703784 CTCACATTCTGGCTTTCTTTGCAGCAAGTGATGGCATACTCAATGCAAACTTGGTGGAGC 66703725 Query 268908 AGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTA 268967 || | ||||| | || || | || || | |||||| | || ||||| | | | Sbjct 66703724 GATTTAGCCAAGAAATTCAAGTTACAGAGGCTGGCTGTTTT-ATGGCTTCCAAACTGGCA 66703666 Query 268968 TAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACA 269027 | || || || || | ||||| ||||| | || || ||||| || | ||| || Sbjct 66703665 TGAGAAGCATACACTCTAAAATGTATAGTCTCCTTATTGACACTTACATTAAAGATCGCA 66703606 Query 269028 ACGAAAAGAAAAGACTATTTTC--TTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTC 269085 | |||| || || | | ||||| | |||| ||| ||| |||||||| | Sbjct 66703605 AAGAAA-GAGAATA-TCTTTTCAATGCTATTGAAACAATGCC---TGTGAGAAGG----C 66703555 Query 269086 TGAATGGGCTCTGAAATGGATAAACGATAGCGCGCCT---TACGGAGAAAGGTTAGTTGC 269142 ||| ||||| || | |||| || | | || || | |||| | | || || Sbjct 66703554 TGACTGGGCCTTGCATTGGACTGGGGACAAAGAAGCTACATATGCAGAACGAGTTGTGGC 66703495 Query 269143 TTTTGCCGCTGTAGAAGGTATATTCTTTT-CGGGGTCTTTTGCCGCTATCTTTTGGTTGA 269201 |||||||| ||||||| || ||||||| | || |||||||| | || || ||| | | Sbjct 66703494 CTTTGCCGCGGTAGAAGCAATCTTCTTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCA 66703435 Query 269202 AGAAAAGAGGCCTTATGCCAGGATTAAC-TTTCTCTAACGAATTGATAAGCAGGGACGAA 269260 ||||| || || ||||| || | || ||| || || || | || ||||| ||||| Sbjct 66703434 AGAAACAGGGACTGATGCCGGGCCTTACATTTTTCCAATGAGCTTATTAGCAGAGACGAG 66703375 Query 269261 GGTTTACACTGCGACTT 269277 ||||||||||| ||||| Sbjct 66703374 GGTTTACACTGGGACTT 66703358 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/185 (71%), Gaps = 9/185 (5%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC---- 104406 || ||||| | |||| || || ||||| || |||||||| | ||| | || || Sbjct 111628527 ACAAGATGAAGGGTAGGCTCCTTTTGAATGTTGTAGTCAGACAAAGTACGGCCATCGTTC 111628586 Query 104407 ----TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTT 104462 || ||| || || |||||||| || |||||||| |||||||||| | |||||| | Sbjct 111628587 ATCTTTTTAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGCAAGTCCTTCCT 111628646 Query 104463 TATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAA 104522 ||||||| ||||| | || |||||||||| || || || || ||||| || || | Sbjct 111628647 TATCCTGGATCTTGACCTT-ACATTTTCTATAGTGTCCGAGGGCTCAACCTCGAGCGTGA 111628705 Query 104523 TAGTC 104527 | ||| Sbjct 111628706 TGGTC 111628710 >seq6 Length=112758220 Score = 114 bits (126), Expect = 3e-20 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || || || || ||||| || |||||||| | ||| | || ||||| Sbjct 8842478 ACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATCTTCC 8842537 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 || || || |||||||| |||||||| |||||||||| | |||||| |||||||| Sbjct 8842538 AGCTGCTTACCAGCAAAGGCCAGCCTCTGCTGATCAGGAGCAAGTCCTTCCTTATCCTGG 8842597 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||| || ||||||||||||| || || ||||| |||| || || || || Sbjct 8842598 ATCTTGGCCTTTACATTTTCTATAGTGTCCAAGGGTTCAACCTTGAGGGTGATGGT 8842653 Score = 96.9 bits (106), Expect = 8e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 ||| |||| | || || |||||| | |||||||| || |||||||| || |||||||| Sbjct 9090590 GGACAAAGAGTTGTGGCCTTTGCCACCGTAGAAGGAATCTTCTTTTCCGGTTCTTTTGCA 9090649 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245 | | || ||| | |||||| | || || ||||| || | || | || || || | Sbjct 9090650 TCAAGATTCTGGCTCAAGAAACGGGGACTGATGCCGGGCCTTACACTTTCCAATGAGCTT 9090709 Query 269246 ATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTG 269283 || ||||| ||||| ||||||||||| ||||| || || Sbjct 9090710 ATTAGCAGAGACGAGGGTTTACACTGGGACTTTGCCTG 9090747 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 269492 GTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTC 269551 || |||||||||||| || ||||| ||||| ||| ||||||| ||| | || ||||| Sbjct 9090445 GTAGAAAATCCGTTTGACTTCATGGAAAATATCTCACTAGAAGGAAAGACAAACTTCTTT 9090386 Query 269552 GAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTCTACTAAAGAAGAAAATATT 269611 |||||||| ||| | | ||||||| |||||| || ||||| | | ||| ||| | Sbjct 9090385 GAGAAGCGAGTAGGCGAGTATCAGAGAATGGGAGTCATGTCGAATTCGACAGAGAATTCT 9090326 Query 269612 TTCACTACAGATGCAGAATTCTAA 269635 || || ||||| || |||||| Sbjct 9090325 TTTACCTTGGATGCTGACTTCTAA 9090302 >seq23 Length=120012414 Score = 113 bits (124), Expect = 1e-19 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || |||||||| || || |||| ||||||||||| |||||||| |||||||| ||| Sbjct 46765005 TGCTTACCAGCAAAGATCAGGTTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATC 46765064 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || || ||||||||||||| || || | |||| ||||| || | || ||||| || Sbjct 46765065 TTGGCCTTTACATTTTCTATAGTGTCCAAAAGTTCAACCTCAAGCATGATGGTCTTCCCT 46765124 Query 104534 GTAAGTGTTTTTACAAATATCTGCA 104558 |||| || || ||||| |||||| Sbjct 46765125 ATAAGGGTCTTCACAAAAGTCTGCA 46765149 >seq5 Length=114734182 Score = 84.2 bits (92), Expect = 5e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 269492 GTTGAAAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTC 269551 || |||||||||||| || ||||| ||||| ||| ||||||| ||| | || ||||| Sbjct 21263782 GTAGAAAATCCGTTTGACTTCATGGAAAATATCTCACTAGAAGGAAAGACAAACTTCTTT 21263841 Query 269552 GAGAAGCGGGTAAGTAACTATCAGAAAATGGGTGTAATGTCTACTAAAGAAGAAAATATT 269611 |||||||| ||| | | ||||||| ||||| || ||||| | | ||| ||| | Sbjct 21263842 GAGAAGCGAGTAGGCGAGTATCAGAGGATGGGAGTCATGTCGAATTCGACAGAGAATTCT 21263901 Query 269612 TTCACTACAGATGCAGAATTCTAA 269635 || || ||||| || |||||| Sbjct 21263902 TTTACCTTGGATGCTGACTTCTAA 21263925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151351753252696