Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_015049.1 Length=124335 Score E Sequences producing significant alignments: (Bits) Value seq11 98.7 8e-16 seq1677 93.3 3e-14 seq1811 91.5 1e-13 seq1601 91.5 1e-13 seq2115 86.0 5e-12 seq2188 82.4 6e-11 seq755 82.4 6e-11 seq103 82.4 6e-11 seq44 82.4 6e-11 >seq11 Length=89975685 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 347 TGCCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGC 406 ||||||||||| |||||| || || ||| | ||||| | | ||| || | | | Sbjct 33085685 TGCCTCATGTTGTACATGGCATGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGA 33085744 Query 407 TGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATC 466 |||||||||||| || |||||||| || || || ||||| ||||| || ||| | | Sbjct 33085745 TGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTG 33085804 Query 467 AGTCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGT 526 ||||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| Sbjct 33085805 GGTCAGCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAG 33085864 Query 527 GGCCCAACATTTTAGTGTTACTTGACGGTCAGGT 560 |||||| || |||| || || | | |||||| Sbjct 33085865 GGCCCAGCACCTTAGGGTGACGTCTCTTTCAGGT 33085898 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||| ||| | |||||||| || ||||| ||||||| | ||| || | | |||| Sbjct 32911360 CCTTATGGTACACATGACATGTGTATTTCTGCTCTTCCCCAGAAGGCACCACCACAGCTG 32911419 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || || ||||| || || || ||||| ||||| || || | | | Sbjct 32911420 CCCACTTCTGGAAGGTCCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCGTGTCCTGAA 32911479 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||||| ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 32911480 TCAGTTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 32911539 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGG 559 |||| ||| | || || || | || ||||| Sbjct 32911540 CCCAGCATCTCAGGGTGACATCACCTTCAGG 32911570 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||||| ||||| || ||||| || ||||| || ||| || | | | || Sbjct 30273123 CCTCATGTTCCACATGGCATGTATAATTCTGCTCCTTCCAACGAGGCACCACCACAGATG 30273182 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 30273183 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 30273242 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 30273243 TCAGCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 30273302 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558 |||| || | || || || | || |||| Sbjct 30273303 CCCAGCACCTCAGGGTGACATCACCTTCAG 30273332 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||||| ||||| || || || || ||||| || ||| || | | |||| Sbjct 30305597 CCTCATGTTCCACATGGCATGTGTACTTCTGCTCCTTCCCAAGAGGCACCACCACAGCTG 30305656 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| | ||| | | | Sbjct 30305657 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAACTCCATGTCCTGGG 30305716 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 30305717 TCAGCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCTAGGG 30305776 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||| | | | || |||||| || ||| || Sbjct 30305777 CCCAGCACCTCAGGGTGACATCACCTTCAGATCTGGGGTGATGGGTCACATGTGCCTTTG 30305836 Query 589 G 589 | Sbjct 30305837 G 30305837 Score = 87.8 bits (96), Expect = 1e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||||| ||||| || || || || ||||| || ||| || | | | || Sbjct 30330597 CCTCATGTTCCACATGGCATGTGTACTTCTGCTCCTTCCCAAGAGGCACCACCACAGATG 30330656 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| ||||| || ||||| ||||| | ||| | | | Sbjct 30330657 CCCACTTCTGGAAGGTTCCATCGCCAGCAGGCCTGGTCTCCACAAACTCCATGTCCTGGG 30330716 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 30330717 TCAGGTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 30330776 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || | || | | | || |||||| || |||| || Sbjct 30330777 CCCAGCACCTCAGGGTGACATCACCATGAGATCTGGGGTGATGGGTCACATGTACCTTTG 30330836 Query 589 G 589 | Sbjct 30330837 G 30330837 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||| ||| | |||||||| || ||||| |||||| | ||| || | | |||| Sbjct 32951857 CCTTATGGTACACATGACATGTGTATTTCTGCTCTGCCCCAGAAGGCACCACCACAGCTG 32951916 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| | || ||||| || || || ||||| ||||| || || | | | Sbjct 32951917 CCCACTTCTGGTAGGTCCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCGTGTCCTGAA 32951976 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||||| ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 32951977 TCAGTTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 32952036 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGG 559 |||| ||| | || || || | || ||||| Sbjct 32952037 CCCAGCATCTCAGGGTGACATCACCTTCAGG 32952067 Score = 86.0 bits (94), Expect = 5e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||||| ||||| || | || || ||||| || |||| || | | |||| Sbjct 32004702 CCTCATGTTCCACATGGCATATGTAATTCTGCTCCTTCCCAACAGGCACCACCACAGCTG 32004643 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| | ||| | | | Sbjct 32004642 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAANCTCCATGTCCTGGG 32004583 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 32004582 TCAGCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 32004523 Query 529 CCCAACA 535 |||| || Sbjct 32004522 CCCAGCA 32004516 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||||| ||||| || ||||| || ||||| || ||| || | | | || Sbjct 32929610 CCTCATGTTCCACATGGCATGTATAATTCTGCTCCTTCCAACGAGGCACCACCACAGATG 32929669 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || | | | | | Sbjct 32929670 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCTATGTCCTGGG 32929729 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 32929730 TCAGCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 32929789 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558 |||| || | || || || | || |||| Sbjct 32929790 CCCAGCACCTCAGGGTGACATCACCTTCAG 32929819 Score = 86.0 bits (94), Expect = 5e-12 Identities = 168/246 (68%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 347 TGCCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGC 406 ||||||||||| |||||||| || ||| | || || | | ||| || | | | Sbjct 33982924 TGCCTCATGTTGCACATGACATGTGTATCTCTGTTCCTCTCCAGAAGGCACCACCACAGA 33982983 Query 407 TGCCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATC 466 |||||||||||| || |||||||| || || |||||||| || | | ||| | | Sbjct 33982984 TGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGTCTGGTCTCAATGAGGTCCATGTCCTG 33983043 Query 467 AGTCAGTTGCT-CTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAG 525 |||||| | | || ||||| ||||| || | | | |||| ||||| |||||||| Sbjct 33983044 AGTCAGGTCTTCCTCATCCCA-CTGCCAGGTCAGGATGATGTTAGCAGGGTAGAAGCCCA 33983102 Query 526 TGGCCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCT 585 |||||| || | || || |||| || |||||| | | || |||||| || ||| Sbjct 33983103 GGGCCCAGCACCTCAGGGTGACTTCACCTTCAGGTCTGGGGTGATGGGTCACATGTGCCT 33983162 Query 586 GTGGAG 591 |||| Sbjct 33983163 TGGGAG 33983168 Score = 84.2 bits (92), Expect = 2e-11 Identities = 163/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || ||||| | ||| || | | | || Sbjct 30333393 CCTCATGGTACACATGGCATGTGTAATTCTGCTCCATCCCAAGAGGCACCACCACAGATG 30333452 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 30333453 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 30333512 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||||| ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 30333513 TCAGTTCCTCCCCATTCAAATGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 30333572 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | ||| | || | | | || |||||| || ||| || Sbjct 30333573 CCCAGCACCTCAGGGTGACATCACGTTTAGATTTGGGGTGATGGGTCACATGGGCCTTTG 30333632 Query 589 G 589 | Sbjct 30333633 G 30333633 Score = 82.4 bits (90), Expect = 6e-11 Identities = 165/242 (68%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || ||||| || ||| || | | | || Sbjct 30245695 CCTCATGGTACACATGGCATGTGTAATTCTGCTCCTTCCCAAGAGGCACCACCACAGATG 30245754 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || ||||||| || || || ||||| ||||| | ||| | | | Sbjct 30245755 CCCACTTCTGGAAGGTTCCATTCCCTGCAGGCCTGGTCTCCACAAACTCCATGTCCTGGG 30245814 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG-CCAGTG 527 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||| |||| | Sbjct 30245815 TCAGCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGTCCAG-G 30245873 Query 528 GCCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGT 587 ||||| || | || || |||| | |||||| | | || | |||||| || ||| | Sbjct 30245874 GCCCAGCACCTCAGGGTGACTTCATCTTCAGGTCTGGGGTGACGGGTCACATGTGCCTTT 30245933 Query 588 GG 589 || Sbjct 30245934 GG 30245935 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 351 TCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTGCC 410 ||||| | ||||| || || ||| | ||||| | | ||| || | | |||||| Sbjct 32943338 TCATGGTCCACATGGCATGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCAGAGCTGCC 32943397 Query 411 CACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAGTC 470 |||||||| || ||||||| || || | ||||| ||||| || || | | ||| Sbjct 32943398 CACTTCTGGAAGTTTCCATCCCCTGCAGACCTGGTCTCCACAAGCTCCGTGTCCTGGGTC 32943457 Query 471 AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGGCC 530 || | |||| | || ||||| || | ||| ||||| ||||| |||||||| |||| Sbjct 32943458 AGATCCTCTCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGGCC 32943517 Query 531 CAACATTTTAGTGTTACTTGACGGTCAGGT 560 || || |||| || || | || |||||| Sbjct 32943518 CAGCACCTTAGGGTGACATCACCATCAGGT 32943547 >seq1677 Length=11690 Score = 93.3 bits (102), Expect = 3e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||||| ||||| || || || || ||||| || ||| || | | |||| Sbjct 4554 CCTCATGTTCCACATGGCATGTGTACTTCTGCTCCTTCCCAAGAGGCACCACCACAGCTG 4613 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 4614 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 4673 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 4674 TCAGCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 4733 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||| | | | || |||||| || ||| || Sbjct 4734 CCCAGCACCTCAGGGTGACATCACTTTCAGATCTGGGGTGATGGGTCACATGGGCCTTTG 4793 Query 589 G 589 | Sbjct 4794 G 4794 >seq1811 Length=44946 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||||| ||||| || || || || ||||| || ||| || | | | || Sbjct 20987 CCTCATGTTCCACATGGCATGTGTAATTCTGCTCCTTCCCAAGAGGCACCACCACAGATG 21046 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 21047 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 21106 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||||| ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 21107 TCAGTTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 21166 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558 |||| || | || || || | || |||| Sbjct 21167 CCCAGCACCTCAGGGTGACATCACCTTCAG 21196 >seq1601 Length=24168 Score = 91.5 bits (100), Expect = 1e-13 Identities = 166/243 (68%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || ||||| || ||| || | | |||| Sbjct 12024 CCTCATGGTACACATGGCATGTGTAATTCTGCTCCTTCCCAAGAGGCACCACCACAGCTG 12083 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| | ||| || ||| | | | Sbjct 12084 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTTCACAAGCTCCATGTCCTGGG 12143 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 12144 TCAGCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 12203 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || |||| || |||| | | | || |||||| || ||| || Sbjct 12204 CCCAGCACCTCAGGGTGACTTCACCTTCAGATCTGGGGTGATGGGTCACATGGGCCTTTG 12263 Query 589 GAG 591 ||| Sbjct 12264 GAG 12266 >seq2115 Length=22009 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||||| ||||| || || || || ||||| || ||| || | | | || Sbjct 14044 CCTCATGTTCCACATGGCATGTGTACTTCTGCTCCTTCCCAAGAGGCACCACCACAGATG 13985 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||||||||| | ||| | | | Sbjct 13984 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTTTCCACAAACTCCATGTCCTGGG 13925 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 ||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 13924 TCAACTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCTAGGG 13865 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558 |||| || | || || |||| || |||| Sbjct 13864 CCCAGCACCTCAGGGTGACTTCACCTTCAG 13835 >seq2188 Length=16761 Score = 82.4 bits (90), Expect = 6e-11 Identities = 162/241 (67%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | |||| ||| || || || ||||| || ||| || | | | || Sbjct 9559 CCTCATGGTACACATAACATGTGTAATTCTGCTCCTTCCCAAGAGGCACCACCACAGATG 9618 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 9619 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 9678 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 9679 TCAGCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 9738 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || | || | | | || |||||| || ||| || Sbjct 9739 CCCAGCACCTCAGGGTGACATCACNNTNAGATCTGGGGTGATGGGTCACATGTGCCTTTG 9798 Query 589 G 589 | Sbjct 9799 G 9799 >seq755 Length=15462 Score = 82.4 bits (90), Expect = 6e-11 Identities = 124/174 (71%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| |||||||| || || ||| ||||||||| | || || | | |||| Sbjct 10329 CCTCATGATTTACATGGCATGTGTATCTATGCTCTTCTCCAGAAGAGACCACCACAGCTG 10270 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||| ||||||||||||||||| |||| || ||||| || ||| | ||| | | | Sbjct 10269 CCCATTTCTGAAAAGTTCCATCACCAGAAGGCCTGGTCTCTACCACCTCCATGTCCTGGG 10210 Query 469 TC-AGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAG 521 || |||||| | | || | ||||| |||| ||| || || | || |||||| Sbjct 10209 TCTGGTTGCT-TCCATCCCTCTGCCAGGTTAGGGTGATTTCAGATGGGTAGAAG 10157 >seq103 Length=21800 Score = 82.4 bits (90), Expect = 6e-11 Identities = 167/248 (67%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || || || || ||||| || ||| || | | | || Sbjct 6190 CCTCATGGTACACATGGCATGTGTAATTCTGCTCCTTCCCAAGAGGCACCACCACAGATG 6131 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || ||||||||||| | || ||||| ||||| || ||| | | | Sbjct 6130 CCCACTTCTGGAAGGTTCCATCTCCTGAAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 6071 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 |||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 6070 TCAGCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 6011 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || | || | |||| | | | || |||||| || ||| || Sbjct 6010 CCCAGCACCTCAGAGTGATTTCAACTTCAGATCTGGGGTGATGGGTCACATGTGCCTTTG 5951 Query 589 GAGAAACT 596 | ||| || Sbjct 5950 GGGAATCT 5943 >seq44 Length=25626 Score = 82.4 bits (90), Expect = 6e-11 Identities = 162/241 (67%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408 ||||||| | ||||| || | || || ||||| || | ||| || | | | || Sbjct 4500 CCTCATGNTNCACATGGCATGAGTAATTCTGCTCCTTCCCAGAAGGCACCACCACAGATG 4441 Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468 |||||||||| || |||||||| || || || ||||| ||||| || ||| | | | Sbjct 4440 CCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTCTCCACAAGCTCCATGTCCTGGG 4381 Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528 ||| | ||| | || ||||| || | ||| ||||| ||||| |||||||| || Sbjct 4380 TCANCTCCTCCCCATTCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGG 4321 Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAGGTGTTGCTTGTCTGGTCACGTGAACCTGTG 588 |||| || | || || || | || |||| | | | || |||||| || ||| || Sbjct 4320 CCCAGCACCTCAGGGTGACATCACTTTCAGATCTGGGGTGATGGGTCACATGTGCCTTTG 4261 Query 589 G 589 | Sbjct 4260 G 4260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397731872065872