Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_015295.1 Length=47279 Score E Sequences producing significant alignments: (Bits) Value seq2171 80.6 8e-11 >seq2171 Length=2622 Score = 80.6 bits (88), Expect = 8e-11 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 37598 TGGCGAAAGAGTTACGCTGCCCGGTTATAGCATTGTCTCAGTTGAACCGTAATTTGGAGC 37657 ||||||||||| | | || || | || |||| ||||||||||| | |||||| Sbjct 1521 TGGCGAAAGAGCTGCAAGTGCCTGTGGTGGCGCTGTCGCAGTTGAACCGAAGCCTGGAGC 1580 Query 37658 AGCGTGCAAACAAGCGACCGTGCAATGCCGACTTACGTGAGTCGGGCGTAATCGAGCAGG 37717 ||||||| |||| || ||| ||| ||||| | |||||||| ||| |||||||||| Sbjct 1581 AGCGTGCCGACAAACGTCCGGTCAACTCCGACCTGCGTGAGTCTGGCTCCATCGAGCAGG 1640 Query 37718 AAGCTGATGTGATT 37731 | || || ||||| Sbjct 1641 ATGCCGACCTGATT 1654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151165523710404