Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq22 100 3e-16 >seq22 Length=147524369 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||||||||| || || ||||| ||||| ||||| ||| | |||||| |||||| Sbjct 105164671 TCCCAGACGGAGACCGGTACCCCATACATGCTCTACAAAGATTCCTGTAACCGGAAGAGC 105164730 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| ||||||| ||||| || || || || || ||||| |||||||| Sbjct 105164731 AACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTGTGTACAGAAATAGTAGAGTAC 105164790 Query 76016 ACAGATAAGGATGAG 76030 || ||| |||||| Sbjct 105164791 ACCAGTAAAGATGAG 105164805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596546020586560