Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=185492789 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 133097 GGATATTTGGGGTGCCAAGCACTCTCGGAGATGATCCAGTTCTACCTGGAAGAAGTCATG 133156 || || ||||| |||||||| | || || ||||||||||| ||||||| |||||| ||| Sbjct 122592732 GGTTACTTGGGTTGCCAAGCCTTATCAGAAATGATCCAGTTTTACCTGGTAGAAGTGATG 122592791 Query 133157 CCGCAGGCAGAGAATCACGGACCA 133180 || ||||||||||| || || ||| Sbjct 122592792 CCCCAGGCAGAGAAGCATGGCCCA 122592815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447793500262320