Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq2669 407 2e-108 seq18 251 1e-61 seq6 140 4e-28 seq22 123 3e-23 seq8 111 2e-19 seq5 111 2e-19 seq4 102 1e-16 >seq2669 Length=49141 Score = 407 bits (450), Expect = 2e-108 Identities = 653/930 (70%), Gaps = 20/930 (2%) Strand=Plus/Plus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGT--GACATAACTCCCATTTT 39327 ||| |||||| |||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 22083 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAATTCGACATGACTCCCATCCT 22142 Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 || || || || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 22143 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 22202 Query 39388 CATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCAA 39447 |||| | ||||||||||| | | | | | || ||||| || | || || | Sbjct 22203 CATGCAGTCAAACGGATTTTCTACTCTGAAAATCTTGTTAAAACCCAGCTCCAGCATAAG 22262 Query 39448 TCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 39507 || || || ||||| || || || ||||||| ||||||||||| ||||| || Sbjct 22263 CCTGTCGGCCACAAACTCAATATACTGCTTCATCAAAGTGCAATTCATTCCGATGAGCTT 22322 Query 39508 AACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATCGA 39567 || || | ||||||| || ||||| | || || ||| | || |||||| Sbjct 22323 CACGGGCAAGGCCTCCGGGAGGAACTCCTGCTCTATCCTAACG---TTGGTGATTATCTC 22379 Query 39568 TGTTACTACCTCATCACTCGGTGGAT---GCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | | || |||| | | || ||| | | | | || || ||||| | |||||| || Sbjct 22380 TCTGAC--CCTCTGCTC-CGCTGGCTTGTGTACCAGGTGCTTGAACATCAGGCAGGCAAA 22436 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 |||||| |||| ||||| ||||||||||| | || || |||||||| || || ||||| Sbjct 22437 GTCACAGTGTAAACCCTCGTCTCTACTAATAAGCTCATTGGAAAATGTAAGGCCCGGCAT 22496 Query 39685 TAGACCACGCTTT-TTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 || || | ||| |||||||| ||||| | |||||||| || ||||||||||| |||| Sbjct 22497 CAGCCCCCCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTT 22556 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCT 39803 |||| || ||||| || |||| | ||||| || | | || || || ||| | | Sbjct 22557 CTACAGCGGCAAAGGCCACAACGCGTTCTCCATACGTAGCCTCTTT--GTCCCCAGTCCA 22614 Query 39804 GTGC-----CCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 | || ||| ||||| |||||||| ||||||||||| ||||| |||||||| ||||| Sbjct 22615 GCGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATCGTTTCAATAGCATTGAAGAG 22674 Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918 ||| | | |||| | |||||||| || || || || | |||| |||||||| || Sbjct 22675 ATATTCTCTTTCCTTGGGATCTTTAATGTAAGTGTCAATAAGGGGACTGTACATTTCAGA 22734 Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978 || |||||||| || || || || || || || ||||| | || || |||| ||| || Sbjct 22735 GTGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCCTCTGTAACTTGAAC 22794 Query 39979 CTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAA 40038 ||| | ||||| ||| |||| || ||||| ||||| |||||||| || ||||| || Sbjct 22795 TTCTTGGCTAAATCGCTCCACCAAGTTCTCATTGACTATGCCATCACTCGCTGCAAAGAA 22854 Query 40039 TGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGAT 40098 |||| ||||| ||||||| | | ||||||||| ||| | ||||| | || Sbjct 22855 AGCCAGAACATGAGATATAAAATGTCTCTCATCGGGTTTCAGAGCCTCCCAGTGCTGAAT 22914 Query 40099 ATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACAT 40158 ||| || || | || || || || || |||||||| || ||||| || || |||||||| Sbjct 22915 ATCCTTGGAAAGGTCCACCTCCTCGGCAGTCCAAAAGGAGGCCTCGGCTTTCTTGTACAT 22974 Query 40159 GTTCCATATATCACGATATTGTATTGGAAA 40188 | ||| |||||| | || | || ||||| Sbjct 22975 CTGCCAGATATCATGGTACTCGATGGGAAA 23004 >seq18 Length=146158383 Score = 251 bits (278), Expect = 1e-61 Identities = 420/596 (70%), Gaps = 22/596 (4%) Strand=Plus/Plus Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661 || || ||||| | | || | ||||| || |||| ||||| ||||| ||||| | || Sbjct 66703337 TGCTTGAACATCAGGTAGACAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 66703396 Query 39662 TTAGAAAA-TGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAA 39720 || ||||| ||| || || ||||| || || | || |||||||| ||||| | ||||| Sbjct 66703397 TTGGAAAAATGTAAGGCCCGGCATCAGTCCCTGTTTCTTGAGCCAGAATATCGATGCAAA 66703456 Query 39721 AGATCCAGAAAA-GAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAAC 39779 ||| |||||||| |||||| ||||||| || ||||| || |||| || ||| | || Sbjct 66703457 AGAACCAGAAAAAGAAGATTGCTTCTACCGCGGCAAAGGCCACAACTCGTTCTGCATA-- 66703514 Query 39780 TTGTATCAT-TATGTATCCACTTCTGTGC-----CCAATCAGCTTTCTTCTTTACACAAG 39833 |||| | | | ||| ||| | | ||| ||| ||||| |||| |||| | Sbjct 66703515 -TGTAGCTTCTTTGTCCCCAGTCCAATGCAAGGCCCAGTCAGCCTTCT------CACA-G 66703566 Query 39834 GCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTAT 39893 |||||||||| |||||||| || ||||| | | |||| | | |||||||| || || | Sbjct 66703567 GCATTGTTTCAATAGCATTGAAAAGATATTCTCTTTCTTTGCGATCTTTAATGTAAGTGT 66703626 Query 39894 CTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCA-TCTGAAATCCGTAA 39952 | || | ||||||||||||| || || ||| || || |||| | || || || | | Sbjct 66703627 CAATAAGGAGACTATACATTTTAGAGTGTATGCTTCTCAT-GCCAGTTTGGAAGCCAT-A 66703684 Query 39953 AAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTC 40012 ||||| | || || |||| ||| | ||| | ||||| ||| |||| ||| |||| Sbjct 66703685 AAACAGCCAGCCTCTGTAACTTGAATTTCTTGGCTAAATCGCTCCACCAAGTTTGCATTG 66703744 Query 40013 ACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCG 40072 | ||| |||||||| || ||||| || |||| | || ||||||| | | |||||| Sbjct 66703745 AGTATGCCATCACTTGCTGCAAAGAAAGCCAGAATGTGAGCTATAAAATGTCTCTCATCG 66703804 Query 40073 GGTGTCAATTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAA 40132 ||| ||| | ||||| ||||||| || || | || || || ||||| |||||| Sbjct 66703805 GGTTTCACAGCTTCCCAGT-GCTGATATCCTTGGAAAGGTCCACCTCCTCAGCAGTCCAA 66703863 Query 40133 AACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAA 40188 || | ||||| || || ||||||| | ||| |||||| | || | || ||||| Sbjct 66703864 AAGGTGGCCTCAGCTTTCCTGTACATCTGCCAGATATCATGGTACTAGATGGGAAA 66703919 >seq6 Length=112758220 Score = 140 bits (154), Expect = 4e-28 Identities = 191/269 (71%), Gaps = 17/269 (6%) Strand=Plus/Minus Query 39602 TGTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCG 39661 || || ||||| | |||||| ||||| || |||| ||||| ||||| ||||| | || Sbjct 9090762 TGCTTGAACATCAGGCAGGCAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 9090703 Query 39662 TTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAA 39721 || |||| ||| || || ||||| || || || || |||||||| ||| | | |||||| Sbjct 9090702 TTGGAAAGTGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCAGAATCTTGATGCAAAA 9090643 Query 39722 GATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT 39781 || || ||||||||||| |||||||| | ||||| || |||| ||| | ||| | Sbjct 9090642 GAACCGGAAAAGAAGATTCCTTCTACGGTGGCAAAGGCCACAACTCTTTGTCCCCA---- 9090587 Query 39782 GTATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTT 39841 ||||| | ||||| ||||| |||||| |||||||| || ||| Sbjct 9090586 ------------ATCCAGCGCAAAGCCCAGTCAGCCGCCTTCTTCACACAAGG-ATGGTT 9090540 Query 39842 TCTATAGCATTAAAGAGATAATGTTTTTC 39870 || |||||||| |||| ||| | | |||| Sbjct 9090539 TCAATAGCATTGAAGAAATATTCTCTTTC 9090511 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/138 (76%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGT--GACATAACTCCCATTTT 39327 ||| |||||| |||| || | |||| ||| ||| || | ||||| ||||||||| | Sbjct 9090302 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAATTCGACATGACTCCCATTCT 9090361 Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 || || || || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 9090362 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 9090421 Query 39388 CATGAAATCAAACGGATT 39405 |||||| ||||||||||| Sbjct 9090422 CATGAAGTCAAACGGATT 9090439 >seq22 Length=147524369 Score = 123 bits (136), Expect = 3e-23 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 ||||||||||| || || ||||| |||||||| || ||||||||||| || || | || Sbjct 105169244 TGAAATTCCCCTGACAAGACTCTGCGAGTGTAGATGTTACTGGTATAAGGCTCAATGGAC 105169185 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 |||||||| |||||||| || |||||||| ||||| ||||| || || | | |||||| Sbjct 105169184 TCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 105169125 Query 68839 TTTCTAAGACCAT 68851 ||||| | ||||| Sbjct 105169124 TTTCTTATACCAT 105169112 Score = 105 bits (116), Expect = 9e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| |||||||| |||||||| || |||||| || | || || || ||||| || | Sbjct 105172285 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 105172226 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 | | || || || |||||||||||||| ||||| || || ||||| || | || | ||| Sbjct 105172225 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 105172166 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 | |||| |||||||| | |||||| | | || || | ||||| |||| Sbjct 105172165 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 105172115 Score = 96.9 bits (106), Expect = 5e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393 |||| || | ||| |||||||| ||||| || || || | ||||| || ||||| || | Sbjct 105151169 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCTATCCTTGCTGCCAGGA 105151110 Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453 | ||||||||||| || | || || | || || ||| | || ||||| | || || | Sbjct 105151109 TGGCATAGTCAGGGTGCTTCGTGGTCAAGGTCGCGGCTGTCTCAGCAGCCAGGGTGTCCA 105151050 Query 70454 ATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| | || || || || ||||||| ||||| || |||||||||| Sbjct 105151049 GTTCCACTGTGGTGACCCCACTATATAGGCCTTGGATTACTTTCATGG 105151002 >seq8 Length=97450195 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 ||||| || || || | ||| || ||||| || ||||||||||| || || | ||| || Sbjct 32799293 TCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGTCCAGGCATGAGGCCTCTCTTCTTT 32799352 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||| ||||| |||||||| |||||||| ||||| || ||||| || || ||||| || Sbjct 32799353 AGCCAGAATATTGCAGCAAATGATCCAGAGAAGAAAATTCCTTCCACAGCAGCAAAGGCC 32799412 Query 39761 ACAAGTCTCTCTCC 39774 || | |||||| || Sbjct 32799413 ACCACTCTCTCCCC 32799426 >seq5 Length=114734182 Score = 111 bits (122), Expect = 2e-19 Identities = 100/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||| ||||| ||||| | || || |||||||| || || ||||| || || || || | Sbjct 21262837 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 21262778 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||| | |||||||| || ||||||||||| |||||||| || ||||| | Sbjct 21262777 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 21262718 Query 39759 CAACAA 39764 | |||| Sbjct 21262717 CCACAA 21262712 Score = 89.7 bits (98), Expect = 7e-13 Identities = 104/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGT--GACATAACTCCCATTTT 39327 ||| |||||| |||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 21263925 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAATTCGACATGACTCCCATCCT 21263866 Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 || || || || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 21263865 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 21263806 Query 39388 CATGAAATCAAACGGATT 39405 |||||| ||||||||||| Sbjct 21263805 CATGAAGTCAAACGGATT 21263788 >seq4 Length=117747451 Score = 102 bits (112), Expect = 1e-16 Identities = 199/292 (68%), Gaps = 8/292 (3%) Strand=Plus/Plus Query 172167 TTTGCTAATACAGAGGGTGGATTTTTGTTCATTGGGCTGGATGGAAATACACGTAAAGTA 172226 ||||| || || || || |||| |||||||||||| ||||||| || || | || | Sbjct 78088738 TTTGCAAACACTGAAGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACCCAGCAAATT 78088797 Query 172227 ATTGGATTCGATGCTGGACAAGAAT-ATCTCGATATTATAGGTCGTGAGATAGAAAAGCG 172285 ||||| || || || | | |||| ||||| || ||| |||| ||||||||| | Sbjct 78088798 ATTGGTTTTGAAGCAG-AGAAGAGCGATCTCCTGCTTCTAGAGAGTGAAATAGAAAAGTG 78088856 Query 172286 TGTTAAAAGACTTCATGTTGTGCACTTTTGTGAGAAAAAAGAGGATATCAAATATGCATA 172345 | || || | ||| ||||| |||| | | || ||| | || ||||| ||| Sbjct 78088857 CATCCAACAGCTGCCTGTCACTCACTTCTGTGGGGAGAAGGAGAAGATAAAATACACATG 78088916 Query 172346 TAGATTCATCAAGGTATATAAACCTGGTGATGAAAATACATCAACATATGTATGTGCTAT 172405 | ||||||| | ||| | ||| | || | || | ||| |||| ||||| | Sbjct 78088917 CAAATTCATCGAAGTACACAAATCCGGAGCTGTGTGTGCAT------ATGTGTGTGCGCT 78088970 Query 172406 CAAAGTGGAGAGATTTTGTTGTGCCGTGTTCACTGATTATCCTGAATCGTGG 172457 || |||||||||||| || ||||| |||||| ||| | |||||||| ||| Sbjct 78088971 CAGAGTGGAGAGATTCTGCTGTGCAGTGTTCGCTGCGGAGCCTGAATCCTGG 78089022 Score = 95.1 bits (104), Expect = 2e-14 Identities = 187/275 (68%), Gaps = 10/275 (4%) Strand=Plus/Plus Query 172167 TTTGCTAATACAGAGGGTGGATTTTTGTTCATTGGGCTGGATGGAAATACACGTAAAGTA 172226 ||||| || || || || |||| |||||||||||| ||||||| || | | ||| | Sbjct 78484092 TTTGCAAACACTGAAGGGGGATATTTGTTCATTGGCTTGGATGGCAAAAACCAGAAAATT 78484151 Query 172227 ATTGGATTCGATGCTGGACAAGAAT-ATCTCGATATTATAGGTCGTGAGATAGAAAAGCG 172285 ||||| || ||||| || |||| | ||||| || ||| |||| ||||||||| | Sbjct 78484152 ATTGGTTTTGATGC-AGAGAAGAGTGATCTCATGCTTCTAGAGAGTGAAATAGAAAAGTG 78484210 Query 172286 TGTTAAAAGACTTCATGTTGTGCACTTTTGTGAGAAAAAAGAGGATATCAAATATGCATA 172345 | || | || | ||| ||||| |||| | | || ||| | || ||||| ||| Sbjct 78484211 CATCCAAGGGCTGCCTGTCACTCACTTCTGTGGGGAGAAGGAGAAGATAAAATACACATG 78484270 Query 172346 TAGATTCATCAAGGTATATAAACCTGGTGATGAAAATACATCAACATATGTATGTGCTAT 172405 | |||||| | || | ||| | || | || | ||||||| |||| | Sbjct 78484271 CAAGTTCATCGAAGTGCACAAATCCGGAGCTG--------TGTGCATATGTGTGTGTGCT 78484322 Query 172406 CAAAGTGGAGAGATTTTGTTGTGCCGTGTTCACTG 172440 || |||||||||||| || ||||| |||||| ||| Sbjct 78484323 CAGAGTGGAGAGATTCTGCTGTGCAGTGTTCGCTG 78484357 Score = 84.2 bits (92), Expect = 3e-11 Identities = 251/385 (65%), Gaps = 8/385 (2%) Strand=Plus/Plus Query 172074 TTCACTAGATCCACTAATGTTAAAGTTACATCTATTTCGGGTAAACAACTAAGGACACGT 172133 || || ||||||| ||||| ||||||||| |||| | |||| || | | ||| Sbjct 78042614 TTTACCAGATCCAGATATGTTGAAGTTACATTGCTTTCAGCGAAACGCCTGCGAAAACGC 78042673 Query 172134 CTACGACAGCAACTTCCTTCGACTATCGCATCTTTTGCTAATACAGAGGGTGGATTTTTG 172193 | | ||| || ||| ||| | | | ||||| || ||||| || ||||||||| Sbjct 78042674 ATCAAAGAGCTCCTCCCTCAAACTGTTTCTGCATTTGCAAACACAGATGGGGGATTTTTG 78042733 Query 172194 TTCATTGGGCTGGATGGAAATACACGTAAAGTAATTGGATTCGATGCTGGACAAGAAT-A 172252 |||||||| ||||||| || || | || | ||||| || || || | |||| | | Sbjct 78042734 TTCATTGGTTTGGATGGCAAAACCCAGCAAATTATTGGTTTTGAAGC-AAAGAAGAGTGA 78042792 Query 172253 TCTCGATATTATAGGTCGTGAGATAGAAAAGCGTGTTAAAAGACTTCATGTTGTGCACTT 172312 || | | ||| |||| ||||||||| | || || | ||| ||||| Sbjct 78042793 CCTTGTGTGTCTAGAGAGTGAAATAGAAAAGTACATCCAACAGCTGCCTGTCACTCACTT 78042852 Query 172313 TTGTGAGAAAAAAGAGGATATCAAATATGCATATAGATTCATCAAGGTATATAAACCTGG 172372 |||||| | || ||| | ||||| || | | ||||||| | || | ||| | || Sbjct 78042853 CTGTGAGGAGAAGGAGAAGATCAAGTACAAGTGCAAATTCATCGAAGTGCACAAATCCGG 78042912 Query 172373 TGATGAAAATACATCAACATATGTATGTGCTATCAAAGTGGAGAGATTTTGTTGTGCCGT 172432 | || | ||||||| ||||| ||| ||||||||| || || ||||| || Sbjct 78042913 AGCTG------TGTGTGCATATGTGTGTGCGCTCAGAGTGGAGAGGTTCTGCTGTGCTGT 78042966 Query 172433 GTTCACTGATTATCCTGAATCGTGG 172457 ||| ||| | |||||||| ||| Sbjct 78042967 GTTTGCTGCAGAGCCTGAATCCTGG 78042991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686881649929680