Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq22 100 4e-16 >seq22 Length=147524369 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| ||| |||||||||| ||||||||||| | |||| | || || || || Sbjct 105164805 CTCATCTTTACTGGTGTACTCTACTATTTCTGTACACAGGTTGCTGCATTTGATGGTTCC 105164746 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 || |||| ||||| |||||| ||| || | ||| |||||||||||||| || || || Sbjct 105164745 CAGGTTCTGCTGGTTGCTCTTCCGGTTACAGGAATCTTTGTAGAGCATGTATGGGGTACC 105164686 Query 111385 CGTCTCCGTCTGTGA 111399 ||||||||||| || Sbjct 105164685 GGTCTCCGTCTGGGA 105164671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628007177035200