Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq2171 114 4e-21 >seq2171 Length=2622 Score = 114 bits (126), Expect = 4e-21 Identities = 114/145 (79%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 34044 GTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCCC 34103 |||||| ||||| || ||||| | |||||| |||| |||||| ||||||||||| | || Sbjct 1684 GTGATAAACCTCATCACGGTAGATGAACATAATCAGGTCGGCATCCTGCTCGATGGAGCC 1625 Query 34104 GGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGC-CGCTGCTCCAGGGAGCGGT 34162 ||||| |||||||| || | | ||| || |||| |||| |||||||||||| |||| Sbjct 1624 AGACTCACGCAGGTCGGAGTTGACCGGACGTTTGT-CGGCACGCTGCTCCAGGCTTCGGT 1566 Query 34163 TGAGCTGCGACAGCACGATCACGGG 34187 | | |||||||||| | | ||| || Sbjct 1565 TCAACTGCGACAGCGCCACCACAGG 1541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160457974777380