Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20caroli_20[genbank_20GCA_5F900094665.2_202017-04-28] 3,162 sequences; 2,553,112,587 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq22 147 2e-30 seq8 145 5e-30 seq14 131 1e-25 seq4 131 1e-25 seq25 127 1e-24 seq19 122 6e-23 seq18 105 5e-18 seq9 105 5e-18 seq6 89.7 4e-13 >seq22 Length=147524369 Score = 147 bits (162), Expect = 2e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||||||||| ||||| ||| ||||||||| | |||||| || | | || Sbjct 124974684 AGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAANGTTGTAGTCAGACAAAGTCCGG 124974625 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || |||||||||| | ||||||||| | ||| | |||||| Sbjct 124974624 CCATCTTCCAGCTGCTTACCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 124974565 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| ||||| | || ||| ||||| | ||| Sbjct 124974564 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTG 124974505 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| ||||||||||| ||||| ||||| Sbjct 124974504 ATGGTTTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 124974467 Score = 104 bits (114), Expect = 2e-17 Identities = 163/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || | ||| | || ||||||||| | ||| ||| || ||||||||||| ||| Sbjct 136851185 ATGCCACCGCGCAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCG 136851126 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | || ||| | || |||||||| || || || || |||| | |||||| | | Sbjct 136851125 GACAGGGTGCGGCCATCCTCCAGCTGTTTGCCCGCGAATATCAGCCTCTGCTGGTTAGGT 136851066 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | |||||||| || ||||| ||| | | | |||||||| || || Sbjct 136851065 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCG 136851006 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| | || || ||||| ||| | ||||||||||||||||| |||||| || Sbjct 136851005 ACCTCAAGAGTGATGGTCTTGCCCNTCAGGGTCTTCACGAAGATCTGCATGTTG 136850952 >seq8 Length=97450195 Score = 145 bits (160), Expect = 5e-30 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||||||||| ||||| ||| ||||||||| |||||||| || | | || Sbjct 30032857 AGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGG 30032916 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || |||||||||| | ||||||||| | ||| | |||||| Sbjct 30032917 CCATCTTCCAGCTGCTTACCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 30032976 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| ||||| | || ||| ||||| | ||| Sbjct 30032977 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTG 30033036 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || ||||||||||| ||||| ||||| Sbjct 30033037 ATGGTTTTCCCTGTAAGGGTCTTCACAAAGATCTGCAT 30033074 Score = 127 bits (140), Expect = 1e-24 Identities = 159/218 (73%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||||||||| ||||| ||| ||||||||| |||||||| || | | || Sbjct 95921288 AGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGG 95921229 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || | |||||||| | ||||||||| | ||| | |||| Sbjct 95921228 CCATCTTCCAGCTGCTTACCAGTAAAGATCAGCCTCTGCTGATCAGGAGGAA----TTCC 95921173 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| |||| ||| | || |||| ||||| | || ||| ||||| ||| Sbjct 95921172 TTATCCTGGGTCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGGGCGTG 95921113 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| ||||||||||| ||||| ||||| Sbjct 95921112 ATGGTTTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 95921075 >seq14 Length=171410997 Score = 131 bits (144), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCG 44178 |||||||| ||||| |||| ||| ||||||||| |||||||| || | | | | | Sbjct 137735172 AGTCTCAATACCAGATGAAAGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGG 137735231 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 || || ||||||||||| || |||||||||| | ||||||||| | ||| | ||||| Sbjct 137735232 CTA-TCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTC 137735290 Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 ||| ||| |||| ||| | || |||| ||||| | || ||| ||||| | ||| Sbjct 137735291 CTTATCCTGGGTCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACCTCAAGCGT 137735350 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| ||||||||||| || || ||||| Sbjct 137735351 GATGGTTTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 137735389 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || |||||||||||||| | | Sbjct 144150348 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 144150407 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| ||||||||||||| | |||||| || | || Sbjct 144150408 AGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 144150467 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || || || ||| ||||| ||||| || | |||||||| || |||||| Sbjct 144150468 ATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTTTCAATGGTGTCACTGGGCTCCACC 144150527 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | || || ||||| || || ||||||||||||||||| ||||| Sbjct 144150528 TCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 144150574 Score = 122 bits (134), Expect = 6e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCG 44178 |||||||||||||| ||||| ||| ||||||||| |||||||| || | | | | | Sbjct 64263837 AGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCAG 64263896 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 | | || ||||||||||| || |||||||||| | ||||||||| || | ||||| Sbjct 64263897 C-CATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAAGAGCAAGTCCTTC 64263955 Query 44239 CTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGT 44298 ||| ||| ||||| ||| | || |||| ||||| | || ||| || || | || Sbjct 64263956 CTTATCCTAGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTCAACTTCGAGCGA 64264015 Query 44299 AATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | || ||||| ||||||||||| || || ||||| Sbjct 64264016 GATGGGTTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 64264054 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/190 (72%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 |||| | || || | ||||||||||| || ||||| || ||||||||| |||||||| Sbjct 86690341 TTTCCTACCACCACGAAGTCTCAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTA 86690282 Query 44164 ATCGGCGAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222 || ||| |||| | || | ||||||||| || ||| ||||||| | |||||||| Sbjct 86690281 GTC--AAAGTATGGC---CATCTTTCAGCTGCTTGCCAGCACAGATCAACCTCTGCTGAT 86690227 Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282 | | ||| | |||| ||| | | ||||| ||| | || |||| ||||| | || Sbjct 86690226 CAGGAGGAATTCCTTTCTTATTCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGG 86690167 Query 44283 ATTCCACCTC 44292 ||| ||||| Sbjct 86690166 GTTCAACCTC 86690157 >seq4 Length=117747451 Score = 131 bits (144), Expect = 1e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || |||||| |||||||||||||| | ||| ||| | || ||| Sbjct 57378931 ACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCC 57378872 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||||| | ||| || || | || | || || || ||| Sbjct 57378871 AGCTGCTTGCCGGCAAAGATCAGCCTCTGNTGGTCAGGGGGGATGCCCTCTTTATCCTGG 57378812 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| || | |||||||| || |||||||| | || || ||||| Sbjct 57378811 ATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTG 57378752 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||||||||||||||| ||||| Sbjct 57378751 CCGGTCAGGGTCTTCACGAAGATCTGCAT 57378723 Score = 107 bits (118), Expect = 1e-18 Identities = 164/234 (70%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167 || || || | ||| | || ||||||||| | ||| ||| || |||||||||||||| Sbjct 92566636 ATGCCACCGCGCAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCA 92566695 Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227 | || | | | || || ||||| || ||||| || |||| | |||||| || | Sbjct 92566696 GACAGGGTGTGGCCATCCTCTAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCAGGT 92566755 Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCC 44287 || | |||||||| || ||||| ||| | | | |||||||| || || Sbjct 92566756 GGGAGGCCTTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCT 92566815 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| | || || ||||| ||||| ||||||||||||||||| |||||| || Sbjct 92566816 ACCTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGTTG 92566869 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 || |||||| | ||| ||| || ||||||||||| |||| || ||| | || || Sbjct 57051176 CATCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCCTC 57051235 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| || || || || |||| | |||||| || | || | |||||||| || Sbjct 57051236 CAGCTGTTTGCCCGCTAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTCTTG 57051295 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | | |||||||| || || ||||| | || || ||||| Sbjct 57051296 GATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGTCTT 57051355 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||| | |||||||| |||||||| |||||| || Sbjct 57051356 GCCCATCAGGGTCTTTACGAAGATCTGCATGTTG 57051389 >seq25 Length=158037523 Score = 127 bits (140), Expect = 1e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || |||||||||||||| | | Sbjct 45424427 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 45424486 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || || |||||||| ||||||||||||| | |||||| || | || Sbjct 45424487 AGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 45424546 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || || || ||| ||||| |||| | |||| | |||||||| || ||||| Sbjct 45424547 ATGCCCTCTTTATCCTGGATCTTGGCCTTC-ACGTTCGCGATGGTGTCACTGGGCTCCAC 45424605 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| || || ||||| || || ||||||||||| ||||| |||||| Sbjct 45424606 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATG 45424654 Score = 82.4 bits (90), Expect = 5e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | | |||||||| || || |||||| |||||||||||||| Sbjct 45424651 CATGCCACCCCTCAGGCGGAGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAATC 45424710 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | ||| ||| | || ||||||||||| || |||||||||| | |||||| || | Sbjct 45424711 AGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGG 45424770 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCA 44261 || | || || || ||| ||||| ||||| Sbjct 45424771 GGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCA 45424805 >seq19 Length=145277780 Score = 122 bits (134), Expect = 6e-23 Identities = 166/228 (73%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || |||||| |||||||||||||| | | Sbjct 136501827 CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAG 136501886 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| || |||||||||| | |||||| || | || Sbjct 136501887 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAG-GGGG 136501945 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || || || ||| ||||| |||| | |||| | |||||||| || ||||| Sbjct 136501946 ATGCCCTCTTTATCCTGGATCTTGGCCTTC-ACGTTCTCGATGGTGTCACTGGGCTCCAC 136502004 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || ||||| | || |||||||||| |||||| ||||| Sbjct 136502005 CTCCAGGGTGATGGTCTTGCTGGTCAGGGTCTTCAGGAAGATCTGCAT 136502052 >seq18 Length=146158383 Score = 105 bits (116), Expect = 5e-18 Identities = 161/226 (71%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGT---GAAGCGTGCTCTCCTTTTGGATGTTGTAATC-GGCGAGTTG 44175 ||||||||||| |||| |||| ||| ||||||||| |||||||| || | | | | Sbjct 124961163 AGTCTCAACACAAGGTGAAGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 124961222 Query 44176 GCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACC 44235 ||| || | ||||||||| || || ||||||| | ||||| | | | ||| | || Sbjct 124961223 CGGCT-ATCTTTCAGCTGCTTACCAGCGAAGATCAGCCTCTGCTTACCAGGAGGAATTCC 124961281 Query 44236 TTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCAC 44295 |||||| ||| |||| ||| | | |||| ||||| | || ||| ||||||| Sbjct 124961282 TTCCTTATCCTGGGTCTTGGCCTTTACATTATCTATAGTGTCCGAGGGTTCAACCTCCAG 124961341 Query 44296 CGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||| || | ||| ||| | |||||||||| || || ||||| ||| Sbjct 124961342 CGTGATGGCCTTCCCCATAAGGGTCTTCAGAAAAATCTGCATCATG 124961387 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/221 (70%), Gaps = 11/221 (5%) Strand=Plus/Plus Query 44122 TCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTC 44181 ||||||||| || ||||| ||| |||| |||| |||||||| || | | || | Sbjct 28946856 TCTCAACACAAGATGAAGGGTGGACTCCATTTGAATGTTGTAGTCAGACAAAGTACGGCC 28946915 Query 44182 GTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACA---CCTTC 44238 || ||||||||||| || ||| |||| ||| |||||||| ||||| | ||||| Sbjct 28946916 ATCTTCCAGCTGCTTACCAACAATGATC-AACAATGCTGATC---AGGCAGAAGTCCTTC 28946971 Query 44239 CTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296 ||| ||| ||||| ||| || | || ||| ||||||| | ||| |||| | Sbjct 28946972 CTTATCCTGGATCTTGGCCTTTGCATTTTT--TATAGTGTCGGAAGGTTCAGCCTCGGGC 28947029 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| ||| || |||||||| || || |||| Sbjct 28947030 GTGATGGTCTTCCCCACAAGAGTCTTCACAAAAATCAGCAT 28947070 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/194 (71%), Gaps = 9/194 (5%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG--CGAGT-TGG 44176 ||||||||||| || ||||| || ||||||||| |||||||| || | ||| || Sbjct 111628518 AGTCTCAACACAAGATGAAGGGTAGGCTCCTTTTGAATGTTGTAGTCAGACAAAGTACGG 111628577 Query 44177 CGCTCG-TCGTC----CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCA 44231 | ||| || || |||||||| || |||||||||| | ||||||||| | || | Sbjct 111628578 CCATCGTTCATCTTTTTAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGCAA 111628637 Query 44232 CACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCT 44291 |||||||| ||| ||||| ||| || || |||| ||||| | || || |||| Sbjct 111628638 GTCCTTCCTTATCCTGGATCTTGACCTTACAT-TTTCTATAGTGTCCGAGGGCTCAACCT 111628696 Query 44292 CCACCGTAATCGTC 44305 | | ||| || ||| Sbjct 111628697 CGAGCGTGATGGTC 111628710 >seq9 Length=92629107 Score = 105 bits (116), Expect = 5e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 44127 ACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||| || ||||| ||| |||| |||| |||||||| || ||| | || | || | Sbjct 13017541 ACACAAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAA--AGTCCG-GC-CATCTT 13017486 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 |||||||||| || ||||||| || | ||||||||| | || | |||||||| ||| Sbjct 13017485 CCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGCAAGTCCTTCCTTATCCT 13017426 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | || |||| |||| | || ||| ||||| | ||| || |||| Sbjct 13017425 GGATCTTGGCCTTTACATTTTCTATAGTGTTTGAGGGTTCAACCTCAAGCGTGATGGTCT 13017366 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| ||||||||||| || || ||||| Sbjct 13017365 TCCCCAAAAGGGTCTTCACAAAAATCTGCAT 13017335 Score = 105 bits (116), Expect = 5e-18 Identities = 155/218 (71%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 || ||||||||||| ||||| ||| |||| |||| |||||||| || | | || Sbjct 13458712 AGGCTCAACACCAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGACAAAGTCCGG 13458653 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || ||||||| || | ||| ||||| | || | ||| || Sbjct 13458652 CCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGGTGATCAGGAGCAAGTCCT-CC 13458594 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || || ||||| ||| | || |||||||||| || || ||||| | ||| Sbjct 13458593 TTAACCTGGATCTTGGCCTTTACATTTTCTATGGTGTCCAGGGGTTTAACCTCGAGCGTG 13458534 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||| | ||||||||||| || || ||||| Sbjct 13458533 ATGGTCTTCCCCATAAGGGTCTTCACAAAAATCTGCAT 13458496 >seq6 Length=112758220 Score = 89.7 bits (98), Expect = 4e-13 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 |||||||||||||| ||||| ||| ||||||||| |||||||| || | | || Sbjct 8842469 AGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGG 8842528 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || |||||| || | ||||||||| | || | |||||| Sbjct 8842529 CCATCTTCCAGCTGCTTACCAGCAAAGGCCAGCCTCTGCTGATCAGGAGCAAGTCCTTCC 8842588 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCT 44291 || ||| ||||| ||| | || |||| ||||| || ||| |||| Sbjct 8842589 TTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCAAGGGTTCAACCT 8842640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359976527094954