Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq30 315 8e-81 seq23 286 4e-72 seq9 253 2e-62 seq29 114 2e-20 seq32 111 2e-19 >seq30 Length=120421639 Score = 315 bits (348), Expect = 8e-81 Identities = 606/892 (68%), Gaps = 14/892 (2%) Strand=Plus/Minus Query 23831 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 23890 ||| ||| | | | | || || ||| || ||||| || || ||||| ||||| ||||| Sbjct 3353946 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 3353887 Query 23891 TAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTA-AATC 23949 |||||| || || ||||| ||||| | ||||| | | | | || |||| | |||| Sbjct 3353886 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAAT-CTTTGAGAATC 3353828 Query 23950 CCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009 | | ||| || ||||| || || |||||||| || || |||| ||| |||| | Sbjct 3353827 CAAGTTCTACAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACACAGT 3353768 Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069 ||||||| || || ||| || | || | || | ||| || || ||||| || | Sbjct 3353767 TCATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAG 3353708 Query 24070 CGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACA 24129 | || | || || || ||| | ||||| || ||| | ||||| Sbjct 3353707 CATCAGCAATGATTTCCCTCACTCTGTCTTCTGAAGGCTTGTAC---------TGAAACA 3353657 Query 24130 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 24189 ||| || || || || ||||| ||||| || || || || || | ||| || ||||| | Sbjct 3353656 TCAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAAG 3353597 Query 24190 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 24249 | ||||| ||||| ||||| | ||| || ||||| ||||| | |||||||||||||| | Sbjct 3353596 TCAGTCCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAGA 3353537 Query 24250 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCG---CTGT 24306 || |||||||||| || || |||||||| | | |||||| ||| || | || | Sbjct 3353536 AGGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTAT 3353477 Query 24307 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 24366 | |||||| ||||| | || || || || || ||| | |||||||| || || | Sbjct 3353476 CTGCTATCCAGCGCAGAGCCTAGTCTGCTTTTTTCTTAACATATGGCATTGTTTCAATTG 3353417 Query 24367 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTAT 24426 | ||||| | | | | ||| || |||| | | || || || || | | ||| | Sbjct 3353416 CGTTAAATAAAAATTCCCTTTTCTTTGGATCTCTGATGTAAGTGTCTATTAGTAAACTGT 3353357 Query 24427 ACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGG 24486 |||| || || |||| || || ||| || ||||| || ||||| || || ||| | Sbjct 3353356 ACATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTCCG 3353297 Query 24487 TAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGG 24546 || ||| || || || ||| || || | || |||||||| || ||||| ||||||| Sbjct 3353296 GAACCTGGACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACTGG 3353237 Query 24547 CTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCC 24606 |||||||||| || || | || |||||||| || ||||| | | | || || |||| Sbjct 3353236 CTGCAAAAAAGGCTAAGATGTGGGAGATAAAATACTTCTCGTCGGATTTAAGCTTGTTCC 3353177 Query 24607 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 24666 | | | || | || || | || || ||||| ||||||| || |||||| ||| | Sbjct 3353176 AGTGAGGGAGGTTCTTTGACAAGTCAACCTCTTCTCCTGTCCAGAAAGATGCCCGTGCTT 3353117 Query 24667 TTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 |||||||| ||||||| ||| |||| || |||||||| || ||||| || Sbjct 3353116 GCTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 3353065 Score = 194 bits (214), Expect = 2e-44 Identities = 213/283 (75%), Gaps = 3/283 (1%) Strand=Plus/Minus Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179 || || ||||||| || || || || ||||||| |||||||||||| ||||| | || Sbjct 12680223 TGCTTGAACATCAGGCAGGCAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 12680164 Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239 |||||||| || || || ||||| || || || || || ||||| ||||| || ||||| Sbjct 12680163 TTGGAAAATGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCACAATATTGATGCAAAA 12680104 Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---A 24296 || || |||||||| ||||||||||| || |||||||| | || |||||||||||| | Sbjct 12680103 GAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGGCCACAACTCTTTCTCCATACGCA 12680044 Query 24297 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356 | | |||| ||||| ||||| || |||||||| || ||||||||||| Sbjct 12680043 GCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATA 12679984 Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTT 24399 || || |||||||| |||||||| | | |||| || ||||| Sbjct 12679983 GTTTCAATAGCATTGAAGAGATATTCTCTTTCCTTGGGATCTT 12679941 >seq23 Length=145441459 Score = 286 bits (316), Expect = 4e-72 Identities = 630/939 (67%), Gaps = 29/939 (3%) Strand=Plus/Plus Query 23789 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA----GACATAACTCCCATTT 23844 ||| |||||| ||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 104692298 TTAGAAGTCAGCATGCAAGGTAAAAGAATTCTCTG-TGGAATTCGACATGACTCCCATCC 104692356 Query 23845 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTT 23904 | || || || || || | || || || || | ||||| ||||||| ||| ||||||| Sbjct 104692357 TCTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCTTCTAGTGAAATATTTT 104692416 Query 23905 CCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCA---GAAA 23961 || |||| || ||||||| || | | || | |||| |||| || | || Sbjct 104692417 CCGTGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACACCCAGCTCCAGTGGAA 104692476 Query 23962 TCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAA 24021 | || || || | ||| || || || ||||||| ||||| || | | Sbjct 104692477 GC---CTGTCAGCCAAAAATTCAATGTACTGCTTCATCAAAGTGCAATTTGCCCCGAAGA 104692533 Query 24022 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGT-TATA 24080 | || || || | |||| | | ||||| || || | || || | || || | | Sbjct 104692534 GCTTCACAGGCAAAGCCTCCATGAGAAACTCCTGCCCTATCCTAACAGTGTTGGTGTTTT 104692593 Query 24081 ATAGATCTTACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 24139 ||| | ||||| ||| || || | | | | | | | || || ||||||| || || Sbjct 104692594 ATATCTTTTACTCTTTGCTCCAATGGCTTG-TGTACCAGGTGCTTGAACATCAGGCAGGC 104692652 Query 24140 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 24199 | || ||||||| ||||| |||||| ||||| | || ||||||| || || || || Sbjct 104692653 AGAGTCCCAGTGTAAACCCTTGTCTCTGCTAATAAGCTCATTGGAAAGTGTAAGACCCGG 104692712 Query 24200 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 24259 ||| || | || || || ||||| ||||| || ||||| ||| | ||| Sbjct 104692713 CATCAGTCTGCGATTCTTGAGCCAGAATATCGATGCAAA------------GAAGACTCC 104692760 Query 24260 TTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG---CGCTGTCATGTATCCA 24316 ||| || | |||||||| | || || ||||||||| || | |||| |||| Sbjct 104692761 TTCCACCACAGCAAAGGCCACAACTCATTCTCCATATGGGGACTCTTTGTCCCCAGTCCA 104692820 Query 24317 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 24376 ||||| || |||||||| || |||||||||||||| | |||||||| ||||| Sbjct 104692821 ACGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATTGTTTAAATAGCATTGAAGAG 104692880 Query 24377 ATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGA 24436 ||| | | |||| || |||||||| || || ||||| | |||| |||||||| || Sbjct 104692881 ATATTCTCTTTCCTTGGAATCTTTAATGTAAGTGTCAATAAGGGGACTGTACATTTCAGA 104692940 Query 24437 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 24496 || |||||||| ||||| |||| || || |||||||| | ||||| |||| || || Sbjct 104692941 GTGTATGTTTTCCATGGCAATTTAGAAGCCATAGAAACAGCGGGCCTCTGTAACTTGAAC 104693000 Query 24497 TTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 24556 |||| | |||||| || | || |||||||| ||||| || ||||| ||| |||| || Sbjct 104693001 TTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCTACAAAGAA 104693060 Query 24557 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGAT 24616 |||| || || |||||||||| | || || || | || | ||| | | || Sbjct 104693061 AGCCAGAACGTGAGCTATAAAATATCTCTCATCCAGTTTCAGAGCTTCCCAGTGTTGAAT 104693120 Query 24617 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 24676 | | || || | ||||| || | | |||||||| || ||||| || || || ||||| Sbjct 104693121 ACCCTTGGAAAGGTCCACCTCCTTGGCAGTCCAAAAGGAGGCCTCAGCTTTCTTGTACAT 104693180 Query 24677 ATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 | |||||| |||| |||| ||| ||||| | |||||| Sbjct 104693181 CTGCCAGATATCATAGTATTCAATGGGAAAGACAACAAA 104693219 Score = 116 bits (128), Expect = 4e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || |||||||| || ||||| ||||| |||||||| || ||||||||||| || || | Sbjct 102463783 ACCTGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATG 102463724 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 ||||||||||| |||| ||| || |||||||| ||||| ||||| || || | | |||| Sbjct 102463723 GACTCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 102463664 Query 53270 CTATTTCTAAGACCGTA 53286 || || || | ||| || Sbjct 102463663 CTGTTCCTTATACCATA 102463647 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 53381 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 53440 ||||| |||| || || || || || | || || ||||||||||| || || || | Sbjct 102460835 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTGGCTAGTTCACAGCTGGCTTCCAGG 102460776 Query 53441 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 53500 || || || ||||||||||| ||||||| |||||||| || ||||| |||| ||| Sbjct 102460775 GCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTCA 102460716 Query 53501 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 53560 || || || | | || || || || |||||||| ||||| || ||||| || || || Sbjct 102460715 AAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGC 102460656 Query 53561 CTATGTCTCTTATTAGA 53577 | ||| | ||||| || Sbjct 102460655 CGATGGCGTTTATTTGA 102460639 Score = 105 bits (116), Expect = 8e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| || | ||| |||||||||||||| | || || |||||||| || || || || | Sbjct 102446727 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCTATCCTTGCTGCCAGGA 102446668 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 ||||||| || || || | || || | || || ||| | || || | ||| ||||||| Sbjct 102446667 TGGCATAGTCAGGGTGCTTCGTGGTCAAGGTCGCGGCTGTCTCAGCAGCCAGGGTGTCCA 102446608 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 ||| || || || || ||| |||||| |||||||| || ||||| Sbjct 102446607 GTTCCACTGTGGTGACCCCACTATATAGGCCTTGGATTACTTTCAT 102446562 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || |||||||| || |||||| || | || || || |||||||| | Sbjct 102467061 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 102467002 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 | | ||| || || ||||||||||| || || || || || ||||| || | | |||| Sbjct 102467001 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 102466942 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | |||||||| | || ||||| | | |||| | || || |||| Sbjct 102466941 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 102466891 Score = 89.7 bits (98), Expect = 6e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 54404 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 54463 ||||||| || | || | || || ||||| || | |||||||| || || || ||| Sbjct 102451063 CTAGACAGCTGTGGGCGGTTGGTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAAC 102451004 Query 54464 CATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATT 54523 || || ||||||||||| ||||| || || || || | || ||||| || ||||| Sbjct 102451003 CACTTCTCAGAAAGTAGGTTGTAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATC 102450944 Query 54524 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 54562 || || | || | ||| ||||| ||||| ||||||||| Sbjct 102450943 CCCACAGAAACCCTCATCAACATATGCTGTGGTCTTTCA 102450905 >seq9 Length=156508116 Score = 253 bits (280), Expect = 2e-62 Identities = 618/926 (67%), Gaps = 19/926 (2%) Strand=Plus/Plus Query 23789 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGAG---ACATAACTCCCATTTT 23845 |||||||||| || | || | ||| ||| | || | || |||| |||||||| Sbjct 73422145 TTAAAAGTCAGCACCCAAGGTAAACGAATTCT-TTGTGGAATTCACATGACTCCCATCCA 73422203 Query 23846 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTC 23905 || || ||||| || || || || || || || || || ||||||||||| |||||||| Sbjct 73422204 CTGATACTCACCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 73422263 Query 23906 CATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGAAATCAA 23965 |||||| || |||| || || | | || | ||||| |||| || || | Sbjct 73422264 CATGAAGTCAAATGGGTTTCCTACTCTGAAAATCTTGTTAAAACCCAGCTCCAGCATAAG 73422323 Query 23966 TCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 24025 |||| || ||||| || || || ||||||| || || || | || || | Sbjct 73422324 CCTATTGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTTATCTCGATCAGCAT 73422383 Query 24026 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 24085 || || | ||| | | || | | || || || | | ||| | || || Sbjct 73422384 CACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCTAAACTCGTTGGCGATTATTTC 73422443 Query 24086 TCTTACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 24144 | ||||| | | |||| | | | | || | | || || ||||||| | | || | Sbjct 73422444 TTTTACTCTCTGCTTCGTTGGCTTG-TATACCAGGTGCTTGAACATCAGGTAGACAAAGT 73422502 Query 24145 CGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 24204 | ||||||| |||||||||||| ||||| | || |||||||| || || || |||| | Sbjct 73422503 CCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCACCA 73422562 Query 24205 GGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG-AAAAGAAAATTCCTTCT 24263 | || | || || ||||| ||||| | ||||| || |||| ||||||| ||| |||| Sbjct 73422563 GTCCCTGTTTCTTGAGCCAGAATATCGGTGCAAAAGAACCAGAAAAAGAAGATTGGTTCT 73422622 Query 24264 ACTGCCGCAAAGGCAATAAGTCTTTCTCCAT---AACCGGCGCTGTCATGTATCCACTTT 24320 || || |||||||| | || || |||| ||| | | | |||| |||| | Sbjct 73422623 ACCGCAGCAAAGGCCACAACTCGTTCTGCATGTGTAGCTTCTTTGTCCCCAGTCCAATGC 73422682 Query 24321 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAG 24380 ||||| || ||||||| ||| ||||||||| || |||||||| || ||||| Sbjct 73422683 AAGGCCCAGTCAGCCTTCT------CAC-AGGCATTGTTTCAATAGCATTGAAAAGATAT 73422735 Query 24381 tttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGA 24440 | |||||| || |||||||| || || ||||| | ||||| ||||||| || || Sbjct 73422736 TCTTTTTCTTTGGGATCTTTAATGTAAGTGTCAATAAGGAGACTGTACATTTTAGAGTGT 73422795 Query 24441 ATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 24500 ||| ||| || | |||| || || || ||||| | |||||| |||| || |||||| Sbjct 73422796 ATGCCTTCCCTGCCAGTTTGGAAGCCATA-AAACAGCCAGCCTCTGTAACTTGAACTTCT 73422854 Query 24501 ATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCC 24560 | |||||| || | || ||| |||| | ||| || ||||| || |||| || ||| Sbjct 73422855 TGGCTAAATCGCTCCACCAAGTTTGCATTGAGTATGCCATCACTCCCTACAAAGAAAGCC 73422914 Query 24561 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCT 24620 | || || |||||||| | | || || ||| | || |||| | |||| || Sbjct 73422915 AGAACGTGAGCTATAAAATGTCTCTCATCGGGTTTCAG-AGCTTCCCAGTGCTGATCTCC 73422973 Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680 || || | ||||| || || | |||||||| | ||||| || || || ||||| | | Sbjct 73422974 TTGGAAAGGTCCACCTCCTCAGCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACATCTGC 73423033 Query 24681 CAGATGTCATGATATTGAATTGGAAA 24706 ||||| ||||| || | || ||||| Sbjct 73423034 CAGATATCATGGTACTAGATGGGAAA 73423059 >seq29 Length=120129022 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||||||||| ||||| | || |||||||| || || || ||||| || || || || | Sbjct 24711803 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 24711744 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||| ||||| || ||||| || || |||||||| ||||||||||| || ||||||| Sbjct 24711743 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 24711684 Query 24277 CAATAAGTCTTTCTCC 24292 | | || | |||||| Sbjct 24711683 CCACAACGCGTTCTCC 24711668 >seq32 Length=104043685 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218 || || || || || | ||| || ||||| || ||||| ||||| ||||| | ||| || Sbjct 37937217 TCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGTCCAGGCATGAGGCCTCTCTTCTTT 37937276 Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278 ||||| ||||| | |||||||||||||| |||||||||||||| || || |||||||| Sbjct 37937277 AGCCAGAATATTGCAGCAAATGATCCAGAGAAGAAAATTCCTTCCACAGCAGCAAAGGCC 37937336 Query 24279 ATAAGTCTTTCTCC 24292 | | |||||| || Sbjct 37937337 ACCACTCTTTCCCC 37937350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593720063745360