Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29]
207 sequences; 2,807,715,301 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq48 118 1e-21
seq26 118 1e-21
seq22 118 1e-21
seq16 107 2e-18
seq23 105 8e-18
seq30 104 3e-17
seq28 102 9e-17
seq7 100 3e-16
seq1 100 3e-16
seq27 98.7 1e-15
seq31 95.1 1e-14
seq33 87.8 2e-12
seq185 84.2 3e-11
seq25 84.2 3e-11
>seq48
Length=23158
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | ||
Sbjct 14499 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 14558
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| |||||||||||||| || || || | |||||| || | || | | ||||| ||
Sbjct 14559 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 14618
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
| ||| || || | | | | ||||| | ||| || |||| |||||||||
Sbjct 14619 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 14678
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| ||||| || ||||| |||||||| |||||
Sbjct 14679 TTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 14711
>seq26
Length=124595110
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | ||
Sbjct 83409872 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 83409813
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| |||||||||||||| || || || | |||||| || | || | | ||||| ||
Sbjct 83409812 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 83409753
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
| ||| || || | | | | ||||| | ||| || |||| |||||||||
Sbjct 83409752 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 83409693
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| ||||| || ||||| |||||||| |||||
Sbjct 83409692 TTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 83409660
>seq22
Length=149736546
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | ||
Sbjct 122457116 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 122457057
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| |||||||||||||| || || || | |||||| || | || | | ||||| ||
Sbjct 122457056 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 122456997
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
| ||| || || | | | | ||||| | ||| || |||| |||||||||
Sbjct 122456996 CTGGATCTTGGCCTTTACATTTCCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 122456937
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| ||||| || ||||| |||||||| |||||
Sbjct 122456936 TTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 122456904
Score = 96.9 bits (106), Expect = 4e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||||| ||| | ||| |||||||||||| ||||| | || || |||| | | ||
Sbjct 6330010 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTTAGACAAAGTCAGGCCATC 6330069
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| |||||||||||||| || | || | |||||| || | || | | ||||| ||
Sbjct 6330070 TTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 6330129
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
| ||| || || | | | | ||||| | ||| || | || |||||||||
Sbjct 6330130 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTGGAGCGTGATGGT 6330189
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| ||||| || ||||| ||||| || |||||
Sbjct 6330190 TTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 6330222
>seq16
Length=151834684
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
|| ||||| | || | |||| |||| ||| ||| || || || ||||| || | |
Sbjct 125387123 CCACCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAC 125387182
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
|| || || | || || |||||||| || || || || || | ||||||||| | ||
Sbjct 125387183 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 125387242
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136
| || |||||||||| ||| ||| |||| || | | ||||| || | || ||
Sbjct 125387243 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACC 125387302
Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| | |||||||||||||| || || ||||| |||||||| |||||
Sbjct 125387303 TCCAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 125387349
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 125405606 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 125405665
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 125405666 ATACTAACGAGGA 125405678
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 125409016 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 125409075
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 125409076 TACTAACGAGGA 125409087
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| | | ||||||||||||| ||||||| | ||||||||||| ||||||||||||
Sbjct 100992873 TCTCCCCATCGGGGAATCGAACCCCGGTCTCCTGTGTGACAGGCGGGGATACTCACCACT 100992932
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 100992933 ATACTAACGAGGA 100992945
>seq23
Length=145441459
Score = 105 bits (116), Expect = 8e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||||| ||| | ||| |||||||||||| ||||| |||| || |||| | | ||
Sbjct 51458272 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCTGGCCATC 51458213
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| |||||||||||||| || | || | || ||| || | || | | ||||| ||
Sbjct 51458212 TTCCAGCTGCTTACCAGCAAAGACCAGCCTCTACTGATCAGGAGGAATTCCTTCCTTATC 51458153
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
| ||| || || | | ||| ||||| | ||| || |||| |||||||||
Sbjct 51458152 CTGGATCTTGGCCTTTACATTTTCCATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 51458093
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| ||||| || ||||| ||| |||| |||||
Sbjct 51458092 TTTCCCCGTAAGGGTCTTCACAGAGATCTGCAT 51458060
>seq30
Length=120421639
Score = 104 bits (114), Expect = 3e-17
Identities = 69/77 (90%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120
|| |||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 21935492 ATCTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 21935551
Query 60121 CACTATACTACCGAGGA 60137
|||||||||| ||||||
Sbjct 21935552 CACTATACTAACGAGGA 21935568
Score = 102 bits (112), Expect = 9e-17
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 21940318 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 21940377
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 21940378 ATACTAACGAGGAT 21940391
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 21911384 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 21911325
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 21911324 TACTAACGAGGA 21911313
>seq28
Length=122082543
Score = 102 bits (112), Expect = 9e-17
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 69041057 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 69040998
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 69040997 TATACTAACGAGGA 69040984
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 7869849 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 7869790
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 7869789 ATACTAACGAGGA 7869777
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || || |||||||||| ||||| || | || ||||||||||| || || ||
Sbjct 62553021 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAA 62552962
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || | ||||||||| | || | || ||| || ||| ||| || || | |
Sbjct 62552961 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATT 62552902
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | ||||| || | ||||| || | |||||||| ||||| || || ||||| ||
Sbjct 62552901 CTCGATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 62552842
Query 43172 AAAGATTTGCAT 43183
||||| |||||
Sbjct 62552841 GAAGATCTGCAT 62552830
Score = 84.2 bits (92), Expect = 3e-11
Identities = 138/198 (70%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || || |||||||||| ||||| || | || ||||||||||| ||||| ||
Sbjct 73771960 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAA 73772019
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || | ||||||||| | || | || ||| || ||| ||| || || | |
Sbjct 73772020 GATCAGCCTCTGCTGGTCAG-GGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 73772078
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | ||||| || | ||||| || | |||| ||| ||||| || || ||| |
Sbjct 73772079 CTCGATGGTGTCACTGGGCTCCACCTCTAAGGTGAGGGTCTTGCCAGTCAGGGTCGTCGT 73772138
Query 43172 AAAGATTTGCATTTTTAC 43189
||||| |||||||| ||
Sbjct 73772139 GAAGATCTGCATTTTGAC 73772156
>seq7
Length=182113224
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | ||
Sbjct 145510444 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 145510503
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| | |||||||||| || || || | |||||| || | || | | ||||| ||
Sbjct 145510504 TTCCGGAGGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 145510563
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
| | | || || | | | | ||||| | | ||| || |||| |||||||||
Sbjct 145510564 CTGGGTCTTGACCTTTACATTTTCTATAGTGTCCCAGGGTTCAACCTCGAGCGTGATGGT 145510623
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| ||||| || ||||| ||||| || |||||
Sbjct 145510624 TTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 145510656
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || |||| |||||||||||||| ||| ||||||||||| | |||||||||||||
Sbjct 114103438 CTCCCCGTCAGGAAATCGAACCCTGGTGTCCTGCGTGACAGGCAGGGATACTCACCACTA 114103379
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 114103378 TACTAACGAGGA 114103367
>seq1
Length=195471971
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 171037028 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171037087
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 171037088 ATACTAACGAGGA 171037100
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 171072992 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171073051
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 171073052 ATACTAACGAGGA 171073064
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 171080606 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171080665
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 171080666 ATACTAACGAGGA 171080678
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 171102443 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171102384
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 171102383 ATACTAACGAGGA 171102371
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 171065358 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 171065417
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 171065418 TACTAACGAGGA 171065429
>seq27
Length=130694993
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 93452978 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 93453037
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 93453038 TACTAACGAGGA 93453049
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 91182097 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 91182156
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 91182157 TACTAACGAGGA 91182168
>seq31
Length=124902244
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || || |||||||||| ||||| || | || ||||||||||| || || ||
Sbjct 46084773 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAA 46084714
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || | ||||||||| | || | || ||| || ||| ||| || || | |
Sbjct 46084713 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 46084654
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | ||||| || | ||||| || | |||||||| ||||| || || ||||| ||
Sbjct 46084653 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 46084594
Query 43172 AAAGATTTGCAT 43183
||||| |||||
Sbjct 46084593 GAAGATCTGCAT 46084582
>seq33
Length=98207768
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||||| ||| | ||| |||| ||||||| ||||| |||| || ||| | | ||
Sbjct 16968821 CAACACCAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGACAAAGTATGGCCATC 16968762
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| |||||||||||||| || | || | |||||| || | || | | ||||| ||
Sbjct 16968761 TTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAAGTCCTTCCTTATC 16968702
Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150
| ||| || || | | | | ||||| | ||| || |||| |||||||||
Sbjct 16968701 CTGGATCTTGGCCTTTACATTTTCTATGGTGTCCAGGGGTTCAACCTCGAGCGTGATGGT 16968642
Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| ||| | || ||||| ||||| || |||||
Sbjct 16968641 CTTCCCCATAAGGGTCTTCACAAAAATCTGCAT 16968609
>seq185
Length=1462311
Score = 84.2 bits (92), Expect = 3e-11
Identities = 138/198 (70%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || || |||||||||| ||||| || | || ||||||||||| ||||| ||
Sbjct 863517 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAA 863576
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || | ||||||||| | || | || ||| || ||| ||| || || | |
Sbjct 863577 GATCAGCCTCTGCTGGTCAG-GGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 863635
Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171
| | | ||||| || | ||||| || | |||| ||| ||||| || || ||| |
Sbjct 863636 CTCGATGGTGTCACTGGGCTCCACCTCTAAGGTGAGGGTCTTGCCAGTCAGGGTCGTCGT 863695
Query 43172 AAAGATTTGCATTTTTAC 43189
||||| |||||||| ||
Sbjct 863696 GAAGATCTGCATTTTGAC 863713
>seq25
Length=129401213
Score = 84.2 bits (92), Expect = 3e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | ||
Sbjct 111309948 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 111310007
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069
|| |||||||||||||| || || || | |||||| ||
Sbjct 111310008 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATC 111310046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571816120421960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |