Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq48 118 1e-21 seq26 118 1e-21 seq22 118 1e-21 seq16 107 2e-18 seq23 105 8e-18 seq30 104 3e-17 seq28 102 9e-17 seq7 100 3e-16 seq1 100 3e-16 seq27 98.7 1e-15 seq31 95.1 1e-14 seq33 87.8 2e-12 seq185 84.2 3e-11 seq25 84.2 3e-11 >seq48 Length=23158 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | || Sbjct 14499 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 14558 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || |||||||||||||| || || || | |||||| || | || | | ||||| || Sbjct 14559 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 14618 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 | ||| || || | | | | ||||| | ||| || |||| ||||||||| Sbjct 14619 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 14678 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || ||||| |||||||| ||||| Sbjct 14679 TTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 14711 >seq26 Length=124595110 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | || Sbjct 83409872 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 83409813 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || |||||||||||||| || || || | |||||| || | || | | ||||| || Sbjct 83409812 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 83409753 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 | ||| || || | | | | ||||| | ||| || |||| ||||||||| Sbjct 83409752 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 83409693 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || ||||| |||||||| ||||| Sbjct 83409692 TTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 83409660 >seq22 Length=149736546 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | || Sbjct 122457116 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 122457057 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || |||||||||||||| || || || | |||||| || | || | | ||||| || Sbjct 122457056 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 122456997 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 | ||| || || | | | | ||||| | ||| || |||| ||||||||| Sbjct 122456996 CTGGATCTTGGCCTTTACATTTCCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 122456937 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || ||||| |||||||| ||||| Sbjct 122456936 TTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 122456904 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||| ||| | ||| |||||||||||| ||||| | || || |||| | | || Sbjct 6330010 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTTAGACAAAGTCAGGCCATC 6330069 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || |||||||||||||| || | || | |||||| || | || | | ||||| || Sbjct 6330070 TTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 6330129 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 | ||| || || | | | | ||||| | ||| || | || ||||||||| Sbjct 6330130 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTGGAGCGTGATGGT 6330189 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || ||||| ||||| || ||||| Sbjct 6330190 TTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 6330222 >seq16 Length=151834684 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| | || | |||| |||| ||| ||| || || || ||||| || | | Sbjct 125387123 CCACCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAC 125387182 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 || || || | || || |||||||| || || || || || | ||||||||| | || Sbjct 125387183 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 125387242 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | || |||||||||| ||| ||| |||| || | | ||||| || | || || Sbjct 125387243 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACC 125387302 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||||||||| || || ||||| |||||||| ||||| Sbjct 125387303 TCCAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 125387349 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 125405606 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 125405665 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 125405666 ATACTAACGAGGA 125405678 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 125409016 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 125409075 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 125409076 TACTAACGAGGA 125409087 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| | | ||||||||||||| ||||||| | ||||||||||| |||||||||||| Sbjct 100992873 TCTCCCCATCGGGGAATCGAACCCCGGTCTCCTGTGTGACAGGCGGGGATACTCACCACT 100992932 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 100992933 ATACTAACGAGGA 100992945 >seq23 Length=145441459 Score = 105 bits (116), Expect = 8e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||| | | || Sbjct 51458272 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCTGGCCATC 51458213 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || |||||||||||||| || | || | || ||| || | || | | ||||| || Sbjct 51458212 TTCCAGCTGCTTACCAGCAAAGACCAGCCTCTACTGATCAGGAGGAATTCCTTCCTTATC 51458153 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 | ||| || || | | ||| ||||| | ||| || |||| ||||||||| Sbjct 51458152 CTGGATCTTGGCCTTTACATTTTCCATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 51458093 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || ||||| ||| |||| ||||| Sbjct 51458092 TTTCCCCGTAAGGGTCTTCACAGAGATCTGCAT 51458060 >seq30 Length=120421639 Score = 104 bits (114), Expect = 3e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 60061 ATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 60120 || |||||| || | ||||||||||||| ||||||||||||||||||||| |||||||| Sbjct 21935492 ATCTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 21935551 Query 60121 CACTATACTACCGAGGA 60137 |||||||||| |||||| Sbjct 21935552 CACTATACTAACGAGGA 21935568 Score = 102 bits (112), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 21940318 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 21940377 Query 60125 ATACTACCGAGGAT 60138 |||||| ||||||| Sbjct 21940378 ATACTAACGAGGAT 21940391 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 21911384 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 21911325 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 21911324 TACTAACGAGGA 21911313 >seq28 Length=122082543 Score = 102 bits (112), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 69041057 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 69040998 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 69040997 TATACTAACGAGGA 69040984 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 7869849 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 7869790 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 7869789 ATACTAACGAGGA 7869777 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || |||||||||| ||||| || | || ||||||||||| || || || Sbjct 62553021 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAA 62552962 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||||||| | || | || ||| || ||| ||| || || | | Sbjct 62552961 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATT 62552902 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| || | ||||| || | |||||||| ||||| || || ||||| || Sbjct 62552901 CTCGATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 62552842 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 62552841 GAAGATCTGCAT 62552830 Score = 84.2 bits (92), Expect = 3e-11 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || |||||||||| ||||| || | || ||||||||||| ||||| || Sbjct 73771960 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAA 73772019 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||||||| | || | || ||| || ||| ||| || || | | Sbjct 73772020 GATCAGCCTCTGCTGGTCAG-GGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 73772078 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| || | ||||| || | |||| ||| ||||| || || ||| | Sbjct 73772079 CTCGATGGTGTCACTGGGCTCCACCTCTAAGGTGAGGGTCTTGCCAGTCAGGGTCGTCGT 73772138 Query 43172 AAAGATTTGCATTTTTAC 43189 ||||| |||||||| || Sbjct 73772139 GAAGATCTGCATTTTGAC 73772156 >seq7 Length=182113224 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | || Sbjct 145510444 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 145510503 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || | |||||||||| || || || | |||||| || | || | | ||||| || Sbjct 145510504 TTCCGGAGGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 145510563 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 | | | || || | | | | ||||| | | ||| || |||| ||||||||| Sbjct 145510564 CTGGGTCTTGACCTTTACATTTTCTATAGTGTCCCAGGGTTCAACCTCGAGCGTGATGGT 145510623 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| ||||| || ||||| ||||| || ||||| Sbjct 145510624 TTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 145510656 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || |||| |||||||||||||| ||| ||||||||||| | ||||||||||||| Sbjct 114103438 CTCCCCGTCAGGAAATCGAACCCTGGTGTCCTGCGTGACAGGCAGGGATACTCACCACTA 114103379 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 114103378 TACTAACGAGGA 114103367 >seq1 Length=195471971 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 171037028 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171037087 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 171037088 ATACTAACGAGGA 171037100 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 171072992 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171073051 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 171073052 ATACTAACGAGGA 171073064 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 171080606 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171080665 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 171080666 ATACTAACGAGGA 171080678 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 171102443 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171102384 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 171102383 ATACTAACGAGGA 171102371 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 171065358 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 171065417 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 171065418 TACTAACGAGGA 171065429 >seq27 Length=130694993 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 93452978 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 93453037 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 93453038 TACTAACGAGGA 93453049 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 91182097 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 91182156 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 91182157 TACTAACGAGGA 91182168 >seq31 Length=124902244 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || |||||||||| ||||| || | || ||||||||||| || || || Sbjct 46084773 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAA 46084714 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||||||| | || | || ||| || ||| ||| || || | | Sbjct 46084713 GATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 46084654 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| || | ||||| || | |||||||| ||||| || || ||||| || Sbjct 46084653 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCAC 46084594 Query 43172 AAAGATTTGCAT 43183 ||||| ||||| Sbjct 46084593 GAAGATCTGCAT 46084582 >seq33 Length=98207768 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||| ||| | ||| |||| ||||||| ||||| |||| || ||| | | || Sbjct 16968821 CAACACCAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGACAAAGTATGGCCATC 16968762 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || |||||||||||||| || | || | |||||| || | || | | ||||| || Sbjct 16968761 TTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAAGTCCTTCCTTATC 16968702 Query 43091 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 43150 | ||| || || | | | | ||||| | ||| || |||| ||||||||| Sbjct 16968701 CTGGATCTTGGCCTTTACATTTTCTATGGTGTCCAGGGGTTCAACCTCGAGCGTGATGGT 16968642 Query 43151 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || ||| | || ||||| ||||| || ||||| Sbjct 16968641 CTTCCCCATAAGGGTCTTCACAAAAATCTGCAT 16968609 >seq185 Length=1462311 Score = 84.2 bits (92), Expect = 3e-11 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || || |||||||||| ||||| || | || ||||||||||| ||||| || Sbjct 863517 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAA 863576 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||||||| | || | || ||| || ||| ||| || || | | Sbjct 863577 GATCAGCCTCTGCTGGTCAG-GGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 863635 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| || | ||||| || | |||| ||| ||||| || || ||| | Sbjct 863636 CTCGATGGTGTCACTGGGCTCCACCTCTAAGGTGAGGGTCTTGCCAGTCAGGGTCGTCGT 863695 Query 43172 AAAGATTTGCATTTTTAC 43189 ||||| |||||||| || Sbjct 863696 GAAGATCTGCATTTTGAC 863713 >seq25 Length=129401213 Score = 84.2 bits (92), Expect = 3e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | || Sbjct 111309948 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 111310007 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 43069 || |||||||||||||| || || || | |||||| || Sbjct 111310008 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATC 111310046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816120421960