Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq30 315 9e-81 seq23 291 1e-73 seq9 248 1e-60 seq28 114 2e-20 seq29 111 2e-19 seq32 102 1e-16 seq27 98.7 1e-15 >seq30 Length=120421639 Score = 315 bits (348), Expect = 9e-81 Identities = 605/891 (68%), Gaps = 12/891 (1%) Strand=Plus/Minus Query 33278 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33337 ||| ||| | | | | || || ||| || ||||| || || ||||| ||||| ||||| Sbjct 3353946 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 3353887 Query 33338 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCC 33397 ||||| || || ||||| |||||||| ||||| | | |||| ||| ||||| Sbjct 3353886 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 3353827 Query 33398 CAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33457 | ||| || ||||| || || || || || || || |||| ||| |||| || Sbjct 3353826 AAGTTCTACAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACACAGTT 3353767 Query 33458 CATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGC 33517 |||||| ||||| ||| || | || | || | ||| || || ||||| || || Sbjct 3353766 CATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 3353707 Query 33518 ATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACAT 33577 || | || || || || | ||||| || |||| | || |||| Sbjct 3353706 ATCAGCAATGATTTCCCTCACTCTGTCTTCTGAAGGCT--TGTACTGAA-------ACAT 3353656 Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 || || || || || ||||| ||||| || || || || || | ||| || ||||| || Sbjct 3353655 CAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAAGT 3353596 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 ||||| ||||| ||||| | ||| || ||||| ||||| | ||| |||||||| || || Sbjct 3353595 CAGTCCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAGAA 3353536 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTC 33754 | | |||||||| || ||||||||||| | | ||| || ||| || | || || Sbjct 3353535 GGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTATC 3353476 Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814 |||||| ||||| | || || || || || ||| | ||||| ||||| || || Sbjct 3353475 TGCTATCCAGCGCAGAGCCTAGTCTGCTTTTTTCTTAACATATGGCATTGTTTCAATTGC 3353416 Query 33815 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33874 ||||| | | | | ||| || |||| | | ||||| || || | | ||| || Sbjct 3353415 GTTAAATAAAAATTCCCTTTTCTTTGGATCTCTGATGTAAGTGTCTATTAGTAAACTGTA 3353356 Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33934 ||| || || |||| || || ||| |||||||| || ||||| || || ||| | Sbjct 3353355 CATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTCCGG 3353296 Query 33935 AATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGC 33994 || ||| || || || ||| || || | || |||||||| || |||||||||||||| Sbjct 3353295 AACCTGGACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACTGGC 3353236 Query 33995 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCA 34054 ||||||||| || || | || |||||||| || ||||| | | | || || ||||| Sbjct 3353235 TGCAAAAAAGGCTAAGATGTGGGAGATAAAATACTTCTCGTCGGATTTAAGCTTGTTCCA 3353176 Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114 | | || | || || | || || ||||| ||||||| || |||||| ||| | Sbjct 3353175 GTGAGGGAGGTTCTTTGACAAGTCAACCTCTTCTCCTGTCCAGAAAGATGCCCGTGCTTG 3353116 Query 34115 TTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 |||||||| ||||||| ||| |||| |||||||| || || ||||| || Sbjct 3353115 CTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 3353065 Score = 185 bits (204), Expect = 1e-41 Identities = 211/283 (75%), Gaps = 3/283 (1%) Strand=Plus/Minus Query 33567 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCG 33626 || || ||||||| || || || || ||||| | |||||||||||| ||||| | || Sbjct 12680223 TGCTTGAACATCAGGCAGGCAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 12680164 Query 33627 TTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33686 || ||||| || || || ||||| || || || || || ||||| ||||| || || || Sbjct 12680163 TTGGAAAATGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCACAATATTGATGCAAAA 12680104 Query 33687 GATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---A 33743 || ||||||||||||||||||||||| || |||||||| | || ||| |||||||| | Sbjct 12680103 GAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGGCCACAACTCTTTCTCCATACGCA 12680044 Query 33744 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 33803 | | |||| ||||| ||||| || |||||||| || ||||||||||| Sbjct 12680043 GCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATA 12679984 Query 33804 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 33846 ||||| || ||||| |||||||| | | |||| || ||||| Sbjct 12679983 GTTTCAATAGCATTGAAGAGATATTCTCTTTCCTTGGGATCTT 12679941 Score = 96.9 bits (106), Expect = 4e-15 Identities = 123/167 (74%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCTTGA--GACATAACTCCCATTTT 33292 ||| |||||| |||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 12679743 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAAATCGACATGACTCCCATCCT 12679802 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 12679803 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 12679862 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCA 33399 |||||| ||||||||||| || || |||| || ||||| |||| Sbjct 12679863 CATGAAGTCAAACGGATTTTCTACTCTGAAAATCTTGTTAAAACCCA 12679909 >seq23 Length=145441459 Score = 291 bits (322), Expect = 1e-73 Identities = 631/939 (67%), Gaps = 29/939 (3%) Strand=Plus/Plus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA----GACATAACTCCCATTT 33291 ||| |||||| ||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 104692298 TTAGAAGTCAGCATGCAAGGTAAAAGAATTCTCTG-TGGAATTCGACATGACTCCCATCC 104692356 Query 33292 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33351 | || || || || || | || || || || | ||||||||||| | ||| ||||||| Sbjct 104692357 TCTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCTTCTAGTGAAATATTTT 104692416 Query 33352 CCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCA---GAAA 33408 || |||| ||||| ||||| || || |||| || |||| |||| || | || Sbjct 104692417 CCGTGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACACCCAGCTCCAGTGGAA 104692476 Query 33409 TCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGA 33468 | || || || | ||||| || || ||||||| ||||| || | || Sbjct 104692477 GC---CTGTCAGCCAAAAATTCAATGTACTGCTTCATCAAAGTGCAATTTGCCCCGAAGA 104692533 Query 33469 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGT-TATA 33527 | || || || | |||| | | ||||| || || | || || | || || | | Sbjct 104692534 GCTTCACAGGCAAAGCCTCCATGAGAAACTCCTGCCCTATCCTAACAGTGTTGGTGTTTT 104692593 Query 33528 ATAAATCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGC 33586 ||| | | || ||| || || | | | | |||| | || || ||||||| || || Sbjct 104692594 ATATCTTTTACTCTTTGCTCCAATGGCTTG-TGTACCAGGTGCTTGAACATCAGGCAGGC 104692652 Query 33587 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGG 33646 | || ||||| | ||||| |||||| ||||| | || || |||| || || || || Sbjct 104692653 AGAGTCCCAGTGTAAACCCTTGTCTCTGCTAATAAGCTCATTGGAAAGTGTAAGACCCGG 104692712 Query 33647 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCC 33706 ||| || | || || || ||||| ||||| || || |||||||| ||| Sbjct 104692713 CATCAGTCTGCGATTCTTGAGCCAGAATATCGATGC------------AAAGAAGACTCC 104692760 Query 33707 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 33763 ||| || |||||||||| | || || |||||||| || | |||| |||| Sbjct 104692761 TTCCACCACAGCAAAGGCCACAACTCATTCTCCATATGGGGACTCTTTGTCCCCAGTCCA 104692820 Query 33764 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33823 ||||| || |||||||| || ||||||||||| |||| || ||||| ||||| Sbjct 104692821 ACGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATTGTTTAAATAGCATTGAAGAG 104692880 Query 33824 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33883 ||| | | |||| || |||||||| ||||| || || | |||| |||||||| || Sbjct 104692881 ATATTCTCTTTCCTTGGAATCTTTAATGTAAGTGTCAATAAGGGGACTGTACATTTCAGA 104692940 Query 33884 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 33943 || |||||||| ||||| || | || || |||||||| | ||||| |||| || || Sbjct 104692941 GTGTATGTTTTCCATGGCAATTTAGAAGCCATAGAAACAGCGGGCCTCTGTAACTTGAAC 104693000 Query 33944 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAA 34003 |||| | |||||| || | || |||||||| ||||| |||||||| ||| |||| || Sbjct 104693001 TTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCTACAAAGAA 104693060 Query 34004 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGAT 34063 |||| || || |||||||||| | || || || | || | ||| | | || Sbjct 104693061 AGCCAGAACGTGAGCTATAAAATATCTCTCATCCAGTTTCAGAGCTTCCCAGTGTTGAAT 104693120 Query 34064 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 34123 | | || || | ||||| || | | |||||||| || ||||| || || || ||||| Sbjct 104693121 ACCCTTGGAAAGGTCCACCTCCTTGGCAGTCCAAAAGGAGGCCTCAGCTTTCTTGTACAT 104693180 Query 34124 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 | |||||| |||| |||| || || || | |||||| Sbjct 104693181 CTGCCAGATATCATAGTATTCAATGGGAAAGACAACAAA 104693219 Score = 113 bits (124), Expect = 6e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 62619 GATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAAT 62678 ||||| |||| || ||||| || || | || || ||||||| ||| || || || | Sbjct 102460835 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTGGCTAGTTCACAGCTGGCTTCCAGG 102460776 Query 62679 GCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCA 62738 || || || ||||||||||||||||||| |||||||| || ||||| ||||| ||| Sbjct 102460775 GCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTCA 102460716 Query 62739 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62798 || || || | | || || || || || ||||| ||||| || ||||| || || || Sbjct 102460715 AAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGC 102460656 Query 62799 CTATGTCTCTTATTAGA 62815 | ||| | ||||| || Sbjct 102460655 CGATGGCGTTTATTTGA 102460639 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || ||||| || ||||| ||||| |||||||| || ||||||||||| || || | Sbjct 102463783 ACCTGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATG 102463724 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 ||||||||||| |||| ||| || |||||||| ||||| ||||| || || | | |||| Sbjct 102463723 GACTCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 102463664 Query 62508 CTATTTCTAAGACCGTA 62524 || || || | ||| || Sbjct 102463663 CTGTTCCTTATACCATA 102463647 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 63642 CTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 63701 ||||||| || | || | || || ||||| || | |||||||| || || || ||| Sbjct 102451063 CTAGACAGCTGTGGGCGGTTGGTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAAC 102451004 Query 63702 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63761 || || ||||||||||| ||||| || ||||| || | || ||||| || ||||| Sbjct 102451003 CACTTCTCAGAAAGTAGGTTGTAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATC 102450944 Query 63762 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63800 || || | || | ||| ||||| ||||| ||||||||| Sbjct 102450943 CCCACAGAAACCCTCATCAACATATGCTGTGGTCTTTCA 102450905 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| ||||| || |||||||| || |||||| || | || || || |||||||| | Sbjct 102467061 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 102467002 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 | | ||| || || ||||||||||| || || || || || ||||| || | | |||| Sbjct 102467001 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 102466942 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 | || | |||||||| | || ||||| | | |||| | || || |||| Sbjct 102466941 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 102466891 >seq9 Length=156508116 Score = 248 bits (274), Expect = 1e-60 Identities = 618/927 (67%), Gaps = 20/927 (2%) Strand=Plus/Plus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGAG---ACATAACTCCCATTTT 33292 |||||||||| || | || | ||| ||| | || | || |||| |||||||| Sbjct 73422145 TTAAAAGTCAGCACCCAAGGTAAACGAATTCT-TTGTGGAATTCACATGACTCCCATCCA 73422203 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || ||||| || || || || || || || || |||||||| ||||| |||||||| Sbjct 73422204 CTGATACTCACCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 73422263 Query 33353 CATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATCAA 33412 |||||| ||||| || || || || |||| || ||||| |||| || || | Sbjct 73422264 CATGAAGTCAAATGGGTTTCCTACTCTGAAAATCTTGTTAAAACCCAGCTCCAGCATAAG 73422323 Query 33413 TCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 33472 |||| || || ||||| || || ||||||| || || || | || || | Sbjct 73422324 CCTATTGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTTATCTCGATCAGCAT 73422383 Query 33473 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTATAATAAA 33532 || || | ||| | | || | | || || || | | | || | || || Sbjct 73422384 CACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCTAAACTCGTTGGCGATTATTTC 73422443 Query 33533 TCTAACGGTTT-CTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGAAAT 33591 | | || | | |||| | | | | | || | || || ||||||| | | || | Sbjct 73422444 TTTTACTCTCTGCTTCGTTGGCTTG-TATACCAGGTGCTTGAACATCAGGTAGACAAAGT 73422502 Query 33592 CGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTA 33651 | ||||| | |||||||||||| ||||| | || || ||||| || || || |||| | Sbjct 73422503 CCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCACCA 73422562 Query 33652 GGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCC-GGAAAAGAAGATTCCTTCT 33710 | || | || || ||||| ||||| | || || || || | ||||||||||| |||| Sbjct 73422563 GTCCCTGTTTCTTGAGCCAGAATATCGGTGCAAAAGAACCAGAAAAAGAAGATTGGTTCT 73422622 Query 33711 ACTGCAGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCGCTGTCATGTATCCACTTT 33767 || ||||||||||| | || || ||| ||| | | | |||| |||| | Sbjct 73422623 ACCGCAGCAAAGGCCACAACTCGTTCTGCATGTGTAGCTTCTTTGTCCCCAGTCCAATGC 73422682 Query 33768 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 33827 ||||| || ||||||| ||| |||||| ||||| || ||||| || ||||| Sbjct 73422683 AAGGCCCAGTCAGCCTTCT------CAC-AGGCATTGTTTCAATAGCATTGAAAAGATAT 73422735 Query 33828 tttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGA 33887 | |||||| || |||||||| ||||| || || | ||||| ||||||| || || Sbjct 73422736 TCTTTTTCTTTGGGATCTTTAATGTAAGTGTCAATAAGGAGACTGTACATTTTAGAGTGT 73422795 Query 33888 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 33947 ||| ||| || | | || || || || ||||| | |||||| |||| || |||||| Sbjct 73422796 ATGCCTTCCCTGCCAGTTTGGAAGCCATA-AAACAGCCAGCCTCTGTAACTTGAACTTCT 73422854 Query 33948 GTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCC 34007 | |||||| || | || ||| |||| | ||| |||||||| || |||| || ||| Sbjct 73422855 TGGCTAAATCGCTCCACCAAGTTTGCATTGAGTATGCCATCACTCCCTACAAAGAAAGCC 73422914 Query 34008 AATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCT 34067 | || || |||||||| | | || || ||| | || |||| | |||| || Sbjct 73422915 AGAACGTGAGCTATAAAATGTCTCTCATCGGGTTTCAG-AGCTTCCCAGTGCTGATCTCC 73422973 Query 34068 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 34127 || || | ||||| || || | |||||||| | ||||| || || || ||||| | | Sbjct 73422974 TTGGAAAGGTCCACCTCCTCAGCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACATCTGC 73423033 Query 34128 CAGATGTCATGATATTGGATTGGGAAA 34154 ||||| ||||| || | || ||||||| Sbjct 73423034 CAGATATCATGGTACTAGA-TGGGAAA 73423059 >seq28 Length=122082543 Score = 114 bits (126), Expect = 2e-20 Identities = 234/344 (68%), Gaps = 13/344 (4%) Strand=Plus/Plus Query 162451 TTTGCCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAGTA 162510 ||||| ||||| | || ||||||||||||||||| | ||| || || || || | Sbjct 83187207 TTTGCAAACACTGATGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACGCAGCAAATT 83187266 Query 162511 ATTGGATTC-ACGGTGGGTCACGA-CTACCTCAAACTGGTAGAGAGAGATATAGAAAAGT 162568 ||||| || | | | | | || | | ||| || ||||||| || |||||||||| Sbjct 83187267 ATTGGTTTTGAAGCAGAG--AAGAGCGATCTCGTGCTTCTAGAGAGTGAAATAGAAAAGT 83187324 Query 162569 ATATCCAAAAACTTCCTGTTGTGCATTTCTGCAAGAAAAAAGAGGACATCAAGTACGCAT 162628 |||||| | || ||||| || ||||| || | || ||| | ||||||||| | | Sbjct 83187325 GCATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACACGT 83187384 Query 162629 GTAGATTCATCAAGGTGTATAAACCTGGTGATGAGACTACCTCGACATATGTGTGCGCAA 162688 | | ||||||| | ||| | ||| | || | || | | | |||||||||||| | Sbjct 83187385 GCAAATTCATCGAAGTGCACAAATCCGGAGCTGTGTGTGC------ATATGTGTGCGCGA 83187438 Query 162689 TCAAAGTGGAAAGATGCTGCTGTGCTGTGTTTGCGGATTGGCCAGAATCATGGTACATGG 162748 ||| |||||| | | ||||||||| ||||| || | ||| || || ||| || ||| Sbjct 83187439 TCAGAGTGGAGAAGTTCTGCTGTGCAGTGTTCGCTGCAGAGCCTGAGTCCTGGCACGTGG 83187498 Query 162749 ATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 162792 | | | || |||||| || | | |||| ||||||||| Sbjct 83187499 A---AGGCAGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 83187539 Score = 107 bits (118), Expect = 2e-18 Identities = 233/347 (67%), Gaps = 19/347 (5%) Strand=Plus/Plus Query 162451 TTTGCCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAGTA 162510 ||| | ||||| | || ||||||||||||||||| | ||| || || || || | Sbjct 83254959 TTTTCAAACACTGATGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACCCAGCAAATT 83255018 Query 162511 ATTGGATTCACGGTGGGTCAC----GA-CTACCTCAAACTGGTAGAGAGAGATATAGAAA 162565 ||||| || || ||| || | | ||| || ||||||| || ||||||| Sbjct 83255019 ATTGGTTT-----TGAAGCACAGAAGAGCGATCTCGTGCTTCTAGAGAGTGAAATAGAAA 83255073 Query 162566 AGTATATCCAAAAACTTCCTGTTGTGCATTTCTGCAAGAAAAAAGAGGACATCAAGTACG 162625 ||| |||||| | || ||||| || ||||| ||| || ||| | || || ||| Sbjct 83255074 AGTGCATCCAACAGCTGCCTGTCACTCACTTCTGTGGGAAGAAGGAGAAGATAAAATACA 83255133 Query 162626 CATGTAGATTCATCAAGGTGTATAAACCTGGTGATGAGACTACCTCGACATATGTGTGCG 162685 |||| | |||||| | ||| | ||| | || | || | | | ||||||||||| Sbjct 83255134 CATGCAAATTCATTGAAGTGCACAAATCCGGAGCTGTGTGTGC------ATATGTGTGCG 83255187 Query 162686 CAATCAAAGTGGAAAGATGCTGCTGTGCTGTGTTTGCGGATTGGCCAGAATCATGGTACA 162745 | ||| |||||| |||| ||||||||| ||||| || | ||| || || ||| || Sbjct 83255188 CGCTCAGAGTGGAGAGATTCTGCTGTGCAGTGTTCGCTGCAGAGCCCGAGTCCTGGCACG 83255247 Query 162746 TGGATACTAGTGGTAGTATGAAGAAGTATTCTCCAGATGAATGGGTG 162792 |||| | || || |||||| || | | |||| ||||||||| Sbjct 83255248 TGGA---AGGCGGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 83255291 >seq29 Length=120129022 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||||||||| ||||| | || || ||||| || || || ||||| || || || || | Sbjct 24711803 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 24711744 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || ||||||||||||||||||||||| || ||||||| Sbjct 24711743 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 24711684 Query 33724 C 33724 | Sbjct 24711683 C 24711683 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 33236 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCT--TGAGACATAACTCCCATTTT 33292 ||| |||||| |||| || | |||| || ||| || | ||||| |||||||| | Sbjct 24713232 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTCTCTGTCGAATTCGACATGACTCCCATCCT 24713173 Query 33293 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33352 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 24713172 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 24713113 Query 33353 CATGAAATCAAACGGATT 33370 |||||| ||||||||||| Sbjct 24713112 CATGAAGTCAAACGGATT 24713095 >seq32 Length=104043685 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || || || || || | ||| || ||||| || ||||| ||||| ||||| | ||| || Sbjct 37937217 TCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGTCCAGGCATGAGGCCTCTCTTCTTT 37937276 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 ||||| ||||| | ||| |||||||| || ||||| |||||||| || ||||||||||| Sbjct 37937277 AGCCAGAATATTGCAGCAAATGATCCAGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 37937335 >seq27 Length=130694993 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 ||||| |||||||||| | | ||| | ||||| || || ||||||||||||| ||| Sbjct 120222005 GTTACCTTCTATGATGTATATCTGGTTCTGCAAGCGTTTATAATGACTACTGCAGTCTTT 120222064 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| ||||| | | |||||||||||||||||||||||||| ||| | | | |||| Sbjct 120222065 CTTGGCTTGACTGCCTATACTCTACAATCAAAGAGAGATTTCACCAAATTCGGAGCAGG 120222123 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 188173 GCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCACA 188232 |||| ||||||||||| ||||||||||| | ||||| |||||||| ||||||||||||| Sbjct 120208874 GCTCGTCCATCGAGGATGACTTCAACTACGGCAGCTGCGTGGCGTCGGCCAGCGTGCACA 120208933 Query 188233 TACGAATGG 188241 | || |||| Sbjct 120208934 TCCGCATGG 120208942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815970346960