Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq30 306 5e-78 seq23 293 3e-74 seq9 260 2e-64 seq27 131 2e-25 seq29 111 2e-19 seq32 107 3e-18 >seq30 Length=120421639 Score = 306 bits (338), Expect = 5e-78 Identities = 602/891 (68%), Gaps = 12/891 (1%) Strand=Plus/Minus Query 35854 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 35913 ||| ||| | | | | || || ||| || ||||| || || ||||| ||||| ||||| Sbjct 3353946 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 3353887 Query 35914 TAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCC 35973 |||||| || || ||||| ||||| || ||||| | | | |||| ||| ||||| Sbjct 3353886 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 3353827 Query 35974 CAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 36033 | ||| || ||||| || || ||||| || || || |||| ||| |||| || Sbjct 3353826 AAGTTCTACAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACACAGTT 3353767 Query 36034 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 36093 |||||| || || ||| || | || | || | ||| || || ||||| || || Sbjct 3353766 CATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 3353707 Query 36094 GTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACAT 36153 || | || || | ||| | ||||| || ||| | |||||| Sbjct 3353706 ATCAGCAATGATTTCCCTCACTCTGTCTTCTGAAGGCTTGTAC---------TGAAACAT 3353656 Query 36154 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 36213 || || || || || ||||| ||||| || || || || || | ||| || ||||| || Sbjct 3353655 CAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAAGT 3353596 Query 36214 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 36273 ||||| ||||| ||||| | ||| || ||||| ||||| | |||||||||||||| || Sbjct 3353595 CAGTCCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAGAA 3353536 Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA---CTGTC 36330 | |||||||||| || || |||||||| | | ||| || ||| || | || || Sbjct 3353535 GGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTATC 3353476 Query 36331 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 36390 |||||| ||||| | || || || || || ||| | |||||||| || || || Sbjct 3353475 TGCTATCCAGCGCAGAGCCTAGTCTGCTTTTTTCTTAACATATGGCATTGTTTCAATTGC 3353416 Query 36391 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 36450 ||||| | | | | ||| || |||| | | || || || || | | ||| || Sbjct 3353415 GTTAAATAAAAATTCCCTTTTCTTTGGATCTCTGATGTAAGTGTCTATTAGTAAACTGTA 3353356 Query 36451 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 36510 ||| || || |||| || || ||| || ||||| || ||||| || || ||| | Sbjct 3353355 CATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTCCGG 3353296 Query 36511 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 36570 || ||| || || || ||| || || | || |||||||| || ||||| |||||||| Sbjct 3353295 AACCTGGACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACTGGC 3353236 Query 36571 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTCCA 36630 ||||||||| || || | || |||||||| || |||| | | | || || ||||| Sbjct 3353235 TGCAAAAAAGGCTAAGATGTGGGAGATAAAATACTTCTCGTCGGATTTAAGCTTGTTCCA 3353176 Query 36631 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 36690 | | || | || || | || || ||||| ||||||| || |||||| ||| | Sbjct 3353175 GTGAGGGAGGTTCTTTGACAAGTCAACCTCTTCTCCTGTCCAGAAAGATGCCCGTGCTTG 3353116 Query 36691 TTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 36741 |||||||| ||||||| ||| |||| || |||||||| || ||||| || Sbjct 3353115 CTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 3353065 Score = 188 bits (208), Expect = 9e-43 Identities = 212/283 (75%), Gaps = 3/283 (1%) Strand=Plus/Minus Query 36143 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 36202 || || ||||||| || || || || ||||||| |||||||||||| ||||| | || Sbjct 12680223 TGCTTGAACATCAGGCAGGCAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 12680164 Query 36203 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 36262 |||||||| || || || ||||| || || || || || ||||| ||||| || ||||| Sbjct 12680163 TTGGAAAATGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCACAATATTGATGCAAAA 12680104 Query 36263 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 36319 || || |||||||| ||||||||||| || |||||||| | || ||| |||||||| | Sbjct 12680103 GAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGGCCACAACTCTTTCTCCATACGCA 12680044 Query 36320 CCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 36379 | | |||| ||||| ||||| || |||||||| || ||||||||||| Sbjct 12680043 GCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATA 12679984 Query 36380 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTT 36422 || || |||||||| |||||||| | | |||| || ||||| Sbjct 12679983 GTTTCAATAGCATTGAAGAGATATTCTCTTTCCTTGGGATCTT 12679941 >seq23 Length=145441459 Score = 293 bits (324), Expect = 3e-74 Identities = 604/895 (67%), Gaps = 24/895 (3%) Strand=Plus/Plus Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911 ||||| |||||||| | || || || || || | || || || || | ||||| ||| Sbjct 104692341 GACATGACTCCCATCCTCTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCT 104692400 Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971 |||| ||| ||||||||| |||| || |||||||| || | |||| || |||| Sbjct 104692401 TCTAGTGAAATATTTTCCGTGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACA 104692460 Query 35972 CCCAATTCA---GAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCA 36028 |||| || | || | || || || | |||||| || || ||||||| Sbjct 104692461 CCCAGCTCCAGTGGAAGC---CTGTCAGCCAAAAATTCAATGTACTGCTTCATCAAAGTG 104692517 Query 36029 CAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAG 36088 ||||| || | || || || || | |||| | | ||||| || || | || Sbjct 104692518 CAATTTGCCCCGAAGAGCTTCACAGGCAAAGCCTCCATGAGAAACTCCTGCCCTATCCTA 104692577 Query 36089 ACCGCGTCTGT-TATAATAGATATTACTGTTT-CTTCACTCGGTGGATACAATAAATGTT 36146 || | || || | | ||| | ||||| ||| || || | | | | | | | || | Sbjct 104692578 ACAGTGTTGGTGTTTTATATCTTTTACTCTTTGCTCCAATGGCTTG-TGTACCAGGTGCT 104692636 Query 36147 TAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGG 36206 | ||||||| || || | || ||||||| ||||| |||||| ||||| | || |||| Sbjct 104692637 TGAACATCAGGCAGGCAGAGTCCCAGTGTAAACCCTTGTCTCTGCTAATAAGCTCATTGG 104692696 Query 36207 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATC 36266 ||| || || || ||||| || | || || || ||||| ||||| || ||||| Sbjct 104692697 AAAGTGTAAGACCCGGCATCAGTCTGCGATTCTTGAGCCAGAATATCGATGCAAA----- 104692751 Query 36267 CAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG--- 36323 ||| | |||||| || | |||||||| | || || |||||||| || Sbjct 104692752 -------GAAGACTCCTTCCACCACAGCAAAGGCCACAACTCATTCTCCATATGGGGACT 104692804 Query 36324 CACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 36383 | |||| |||| ||||| || |||||||| || |||||||||||||| | Sbjct 104692805 CTTTGTCCCCAGTCCAACGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATTGTTT 104692864 Query 36384 CTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 36443 |||||||| |||||||| | | |||| || |||||||| || || ||||| | Sbjct 104692865 AAATAGCATTGAAGAGATATTCTCTTTCCTTGGAATCTTTAATGTAAGTGTCAATAAGGG 104692924 Query 36444 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 36503 |||| |||||||| || || |||||||| ||||| |||| || || |||||||| | | Sbjct 104692925 GACTGTACATTTCAGAGTGTATGTTTTCCATGGCAATTTAGAAGCCATAGAAACAGCGGG 104692984 Query 36504 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 36563 |||| |||| || |||||| | |||||| || | || |||||||| ||||| || | Sbjct 104692985 CCTCTGTAACTTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGCCAT 104693044 Query 36564 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTT 36623 |||| ||| |||| || |||| || || |||||||||| | || | || | || Sbjct 104693045 CACTCGCTACAAAGAAAGCCAGAACGTGAGCTATAAAATATCTCTCATCCAGTTTCAGAG 104693104 Query 36624 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 36683 | ||| | | ||| | || || | ||||| || | | |||||||| || |||| Sbjct 104693105 CTTCCCAGTGTTGAATACCCTTGGAAAGGTCCACCTCCTTGGCAGTCCAAAAGGAGGCCT 104693164 Query 36684 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 | || || || ||||| | |||||| |||| |||| ||| ||||| | |||||| Sbjct 104693165 CAGCTTTCTTGTACATCTGCCAGATATCATAGTATTCAATGGGAAAGACAACAAA 104693219 Score = 116 bits (128), Expect = 5e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || |||||||| || ||||| ||||| |||||||| || ||||||||||| || || | Sbjct 102463783 ACCTGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATG 102463724 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 ||||||||||| |||| ||| || |||||||| ||||| ||||| || || | | |||| Sbjct 102463723 GACTCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 102463664 Query 65301 CTATTTCTAAGACCGTA 65317 || || || | ||| || Sbjct 102463663 CTGTTCCTTATACCATA 102463647 Score = 107 bits (118), Expect = 3e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 65412 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 65471 ||||| |||| || || || || || | || || ||||||||||| || || || | Sbjct 102460835 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTGGCTAGTTCACAGCTGGCTTCCAGG 102460776 Query 65472 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 65531 || || || ||||||||||| ||||||| |||||||| || ||||| |||| ||| Sbjct 102460775 GCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTCA 102460716 Query 65532 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGT 65591 || || || | | || || || || |||||||| ||||| || ||||| || || || Sbjct 102460715 AAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGC 102460656 Query 65592 CTATGTCTCTTATTAGA 65608 | ||| | ||||| || Sbjct 102460655 CGATGGCGTTTATTTGA 102460639 Score = 105 bits (116), Expect = 9e-18 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || | ||| |||||||||||||| | || || |||||||| || || || | | Sbjct 102446727 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCTATCCTTGCTGCCAGGA 102446668 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||||| || || || | || || | || || ||| | || || ||||| ||||||| Sbjct 102446667 TGGCATAGTCAGGGTGCTTCGTGGTCAAGGTCGCGGCTGTCTCAGCAGCCAGGGTGTCCA 102446608 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || || ||| |||||| |||||||| || ||||| Sbjct 102446607 GTTCCACTGTGGTGACCCCACTATATAGGCCTTGGATTACTTTCAT 102446562 Score = 93.3 bits (102), Expect = 6e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 66435 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 66494 ||||||| || | || | || || ||||| || | |||||||| || || || ||| Sbjct 102451063 CTAGACAGCTGTGGGCGGTTGGTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAAC 102451004 Query 66495 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 66554 || || ||||||||||| ||||| || ||||| || | || ||||| || ||||| Sbjct 102451003 CACTTCTCAGAAAGTAGGTTGTAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATC 102450944 Query 66555 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 66593 || || | || | ||| ||||| ||||| ||||||||| Sbjct 102450943 CCCACAGAAACCCTCATCAACATATGCTGTGGTCTTTCA 102450905 Score = 93.3 bits (102), Expect = 6e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || |||||||| || |||||| || | || || || |||||||| | Sbjct 102467061 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 102467002 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 | | ||| || || ||||||||||| || || || || || ||||| || | | |||| Sbjct 102467001 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 102466942 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || | |||||||| | || ||||| | | |||| | || || |||| Sbjct 102466941 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 102466891 >seq9 Length=156508116 Score = 260 bits (288), Expect = 2e-64 Identities = 592/882 (67%), Gaps = 15/882 (2%) Strand=Plus/Plus Query 35853 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTT 35912 |||| |||||||| || || ||||| || || || || || || || || || |||| Sbjct 73422188 ACATGACTCCCATCCACTGATACTCACCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTT 73422247 Query 35913 CTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATC 35972 ||||||| |||||||||||||| || ||||| || || | |||| || ||||| | Sbjct 73422248 CTAATGAAATATTTTCCATGAAGTCAAATGGGTTTCCTACTCTGAAAATCTTGTTAAAAC 73422307 Query 35973 CCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 36032 ||| || || | |||| || |||||||| || || ||||||| || | Sbjct 73422308 CCAGCTCCAGCATAAGCCTATTGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGT 73422367 Query 36033 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 36092 | || | || || | || || | ||| | | || | | || || || | | Sbjct 73422368 TTATCTCGATCAGCATCACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCTAAACT 73422427 Query 36093 CGTCTGTTATAATAGATATTACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAAC 36151 ||| | || || | ||||| | | |||| | | | | || | | || || ||| Sbjct 73422428 CGTTGGCGATTATTTCTTTTACTCTCTGCTTCGTTGGCTTG-TATACCAGGTGCTTGAAC 73422486 Query 36152 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 36211 |||| | | || || ||||||| |||||||||||| ||||| | || |||||||| Sbjct 73422487 ATCAGGTAGACAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCATTGGAAAAT 73422546 Query 36212 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG-A 36270 || || || |||| || || | || || ||||| ||||| | ||||| || |||| | Sbjct 73422547 GTAAGGCCCGGCACCAGTCCCTGTTTCTTGAGCCAGAATATCGGTGCAAAAGAACCAGAA 73422606 Query 36271 AAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCACT 36327 |||||| ||| |||||| || |||||||| | || || ||| ||| | | | | Sbjct 73422607 AAAGAAGATTGGTTCTACCGCAGCAAAGGCCACAACTCGTTCTGCATGTGTAGCTTCTTT 73422666 Query 36328 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 36387 ||| |||| | ||||| || ||||||| ||| ||||||||| || || Sbjct 73422667 GTCCCCAGTCCAATGCAAGGCCCAGTCAGCCTTCT------CAC-AGGCATTGTTTCAAT 73422719 Query 36388 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 36447 |||||| || ||||| | |||||| || |||||||| || || ||||| | ||||| Sbjct 73422720 AGCATTGAAAAGATATTCTTTTTCTTTGGGATCTTTAATGTAAGTGTCAATAAGGAGACT 73422779 Query 36448 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 36507 ||||||| || || ||| ||| || | |||| || || || ||||| | |||||| Sbjct 73422780 GTACATTTTAGAGTGTATGCCTTCCCTGCCAGTTTGGAAGCCATA-AAACAGCCAGCCTC 73422838 Query 36508 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 36567 |||| || |||||| | |||||| || | || ||| |||| | ||| || ||||| Sbjct 73422839 TGTAACTTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTGCATTGAGTATGCCATCACT 73422898 Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATT 36627 || |||| || |||| || || |||||||| | | || | ||| | || || Sbjct 73422899 CCCTACAAAGAAAGCCAGAACGTGAGCTATAAAATGTCTCTCATCGGGTTTCAG-AGCTT 73422957 Query 36628 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 36687 || | |||| || || || | ||||| || || | |||||||| | ||||| || Sbjct 73422958 CCCAGTGCTGATCTCCTTGGAAAGGTCCACCTCCTCAGCAGTCCAAAAGGTGGCCTCAGC 73423017 Query 36688 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAA 36729 || || ||||| | |||||| ||||| || | || ||||| Sbjct 73423018 TTTCTTGTACATCTGCCAGATATCATGGTACTAGATGGGAAA 73423059 >seq27 Length=130694993 Score = 131 bits (144), Expect = 2e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 9227 TTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATC 9286 ||| || |||||| | |||||| || || ||||| |||| ||| || ||||||||||| Sbjct 120224826 TTACTTTTTATTAACTGCTTCCAGAAACTTCAACAGGTGCAGGAAGAGGTTGATGATATC 120224767 Query 9287 CAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGA 9346 || ||||| | |||| | || | ||| || ||||| || ||||| | || || || || Sbjct 120224766 CATGTAGAGACTGATGGCAGCGATCACGTACTCTTCGGGAGAGAGTCTGTGCATCAGCGA 120224707 Query 9347 GTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAG 9406 ||| || |||||||| ||||| || ||||| | ||||| || | || | || |||||| Sbjct 120224706 GTGTGTATCATAGATGATGAACCCACAGAAGAGGAGGGCGCCTAGAGAGGCCAAGACCAG 120224647 Query 9407 CTCCACTGTTTCACT 9421 ||||| || ||||| Sbjct 120224646 CTCCATCGTCTCACT 120224632 Score = 129 bits (142), Expect = 8e-25 Identities = 100/119 (84%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||| | ||| |||||||||||||||||||||||||||| ||||||| ||||| Sbjct 120222123 CCTGCTCCGAATTTGGTGAAATCTCTCTTTGATTGTAGAGTATAGGCAGTCAAGCCAAGA 120222064 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || ||||||||||||| || || ||||||| ||| | || ||||||||||| ||||| Sbjct 120222063 AAGACTGCAGTAGTCATTATAAACGCTTGCAGAACCAGATATACATCATAGAAGGTAAC 120222005 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 |||| || |||||||| ||||| |||||||| ||||||| ||||||||||| ||||||| Sbjct 120208942 CCATGCGGATGTGCACGCTGGCCGACGCCACGCAGCTGCCGTAGTTGAAGTCATCCTCGA 120208883 Query 9907 TGGAGGAGC 9915 |||| |||| Sbjct 120208882 TGGACGAGC 120208874 >seq29 Length=120129022 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||||||||| ||||| | || |||||||| || || || ||||| || || || || | Sbjct 24711803 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 24711744 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| || ||||| || || |||||||| ||||||||||| || ||||||| Sbjct 24711743 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 24711684 Query 36300 C 36300 | Sbjct 24711683 C 24711683 >seq32 Length=104043685 Score = 107 bits (118), Expect = 3e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || || || || || | ||| || ||||| || ||||| ||||| ||||| | ||| || Sbjct 37937217 TCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGTCCAGGCATGAGGCCTCTCTTCTTT 37937276 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||| ||||| | |||||||||||||| |||||||||||||| || || |||||||| Sbjct 37937277 AGCCAGAATATTGCAGCAAATGATCCAGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 37937335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658171096977880