Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq30 297 3e-75 seq23 271 1e-67 seq9 233 3e-56 seq29 111 2e-19 seq32 107 3e-18 seq28 93.3 6e-14 >seq30 Length=120421639 Score = 297 bits (328), Expect = 3e-75 Identities = 600/891 (67%), Gaps = 12/891 (1%) Strand=Plus/Minus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| ||| | | | | || || ||| || ||||| || || ||||| || || ||||| Sbjct 3353946 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 3353887 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 ||||| || || ||||| |||||||| ||||| | | | |||| ||| ||||| Sbjct 3353886 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 3353827 Query 41881 CAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATT 41940 | ||| || ||||| || || | || || || || |||| ||| |||| || Sbjct 3353826 AAGTTCTACAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACACAGTT 3353767 Query 41941 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 42000 |||||| || || ||| || | || | || | ||| || || ||||| || || Sbjct 3353766 CATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 3353707 Query 42001 GTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACAT 42060 || | || || || ||| | ||||| || ||| | |||||| Sbjct 3353706 ATCAGCAATGATTTCCCTCACTCTGTCTTCTGAAGGCTTGTAC---------TGAAACAT 3353656 Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 || || || || || ||||| ||||| ||||| || || || | ||| || ||||| || Sbjct 3353655 CAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAAGT 3353596 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 ||||| ||||| ||||| | ||| || ||||| ||||| | |||||||||||||| || Sbjct 3353595 CAGTCCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAGAA 3353536 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCA---CTGTC 42237 | | |||||||| || || |||||||| | | ||| || ||| || | || || Sbjct 3353535 GGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTATC 3353476 Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297 |||||| ||||| | || || || || || ||| | ||||| ||||| || || Sbjct 3353475 TGCTATCCAGCGCAGAGCCTAGTCTGCTTTTTTCTTAACATATGGCATTGTTTCAATTGC 3353416 Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATA 42357 ||||| | | | | ||| || |||| | | || || || || | | ||| || Sbjct 3353415 GTTAAATAAAAATTCCCTTTTCTTTGGATCTCTGATGTAAGTGTCTATTAGTAAACTGTA 3353356 Query 42358 CATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGT 42417 ||| ||||| |||| || || ||| |||||||| || ||||| || | ||| | Sbjct 3353355 CATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTCCGG 3353296 Query 42418 AACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGC 42477 |||||| || || || ||| || || | || ||||| || || ||||| |||||||| Sbjct 3353295 AACCTGGACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACTGGC 3353236 Query 42478 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCA 42537 ||||||||| || || | || |||||||| || ||||| | | | | || ||||| Sbjct 3353235 TGCAAAAAAGGCTAAGATGTGGGAGATAAAATACTTCTCGTCGGATTTAAGCTTGTTCCA 3353176 Query 42538 ATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTT 42597 | | || | || || | || || |||||| | ||||| || ||||| ||| | Sbjct 3353175 GTGAGGGAGGTTCTTTGACAAGTCAACCTCTTCTCCTGTCCAGAAAGATGCCCGTGCTTG 3353116 Query 42598 TTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 |||||||| ||||||||||| |||| || ||||| || || ||||| || Sbjct 3353115 CTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 3353065 Score = 185 bits (204), Expect = 1e-41 Identities = 211/283 (75%), Gaps = 3/283 (1%) Strand=Plus/Minus Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109 || || ||||||| || || || || ||||| | |||||| ||||| ||||| | || Sbjct 12680223 TGCTTGAACATCAGGCAGGCAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 12680164 Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAAT 42169 |||||||| || || || ||||| || || || || || ||||| ||||| || ||||| Sbjct 12680163 TTGGAAAATGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCACAATATTGATGCAAAA 12680104 Query 42170 GATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 42226 || || |||||||||||||||||||| || |||||||| | || ||| |||||||| | Sbjct 12680103 GAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGGCCACAACTCTTTCTCCATACGCA 12680044 Query 42227 CCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 42286 | | |||| ||||| ||||| || |||||||| || ||||||||||| Sbjct 12680043 GCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATA 12679984 Query 42287 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 42329 ||||| || ||||| |||||||| | | |||| || ||||| Sbjct 12679983 GTTTCAATAGCATTGAAGAGATATTCTCTTTCCTTGGGATCTT 12679941 Score = 96.9 bits (106), Expect = 5e-15 Identities = 123/167 (74%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 41719 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCTTGA--GACATAACTCCCATTTT 41775 ||| |||||| |||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 12679743 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAAATCGACATGACTCCCATCCT 12679802 Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835 || || || || || || || || || || || ||||||||||| | ||| |||||||| Sbjct 12679803 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 12679862 Query 41836 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCA 41882 |||||| ||||||||||| || | |||| || ||||| |||| Sbjct 12679863 CATGAAGTCAAACGGATTTTCTACTCTGAAAATCTTGTTAAAACCCA 12679909 >seq23 Length=145441459 Score = 271 bits (300), Expect = 1e-67 Identities = 629/940 (67%), Gaps = 31/940 (3%) Strand=Plus/Plus Query 41719 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA----GACATAACTCCCATTT 41774 ||| |||||| ||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 104692298 TTAGAAGTCAGCATGCAAGGTAAAAGAATTCTCTG-TGGAATTCGACATGACTCCCATCC 104692356 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || || || || || | || || || || | || |||||||| | ||| ||||||| Sbjct 104692357 TCTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCTTCTAGTGAAATATTTT 104692416 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCA---GAAA 41891 || |||| ||||| ||||| || | |||| || |||| |||| || | || Sbjct 104692417 CCGTGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACACCCAGCTCCAGTGGAA 104692476 Query 41892 TCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 41951 | || || || | ||||| || || ||||||| ||||| || | | Sbjct 104692477 GC---CTGTCAGCCAAAAATTCAATGTACTGCTTCATCAAAGTGCAATTTGCCCCGAAGA 104692533 Query 41952 GTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGT-TATA 42010 | || || || | |||| | | ||||| || || | || || | || || | | Sbjct 104692534 GCTTCACAGGCAAAGCCTCCATGAGAAACTCCTGCCCTATCCTAACAGTGTTGGTGTTTT 104692593 Query 42011 ATAGATCTTACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 42069 ||| | ||||| ||| || || | | | | | | | || || ||||||| || || Sbjct 104692594 ATATCTTTTACTCTTTGCTCCAATGGCTTG-TGTACCAGGTGCTTGAACATCAGGCAGGC 104692652 Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129 | || ||||| | ||||| ||||| ||||| | || ||||||| || || || || Sbjct 104692653 AGAGTCCCAGTGTAAACCCTTGTCTCTGCTAATAAGCTCATTGGAAAGTGTAAGACCCGG 104692712 Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189 ||| || | || || || ||||| ||||| || ||||| ||||| ||| Sbjct 104692713 CATCAGTCTGCGATTCTTGAGCCAGAATATCGATGCAAA------------GAAGACTCC 104692760 Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGTATCCA 42246 ||| || | |||||||| | || || |||||||| || | |||| |||| Sbjct 104692761 TTCCACCACAGCAAAGGCCACAACTCATTCTCCATATGGGGACTCTTTGTCCCCAGTCCA 104692820 Query 42247 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 ||||| || |||||||| || ||||||||||| |||| || ||||| ||||| Sbjct 104692821 ACGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATTGTTTAAATAGCATTGAAGAG 104692880 Query 42307 ATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGA 42366 ||| | | |||| || |||||||| || || || || | |||| |||||||| || Sbjct 104692881 ATATTCTCTTTCCTTGGAATCTTTAATGTAAGTGTCAATAAGGGGACTGTACATTTCAGA 104692940 Query 42367 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTAC 42426 || |||||||| ||||| || | || || |||||||| | |||||| ||||| || || Sbjct 104692941 GTGTATGTTTTCCATGGCAATTTAGAAGCCATAGAAACAGCGGGCCTCTGTAACTTGAAC 104693000 Query 42427 TTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486 |||| | |||||| || | || ||||| || ||||| || ||||| ||| |||| || Sbjct 104693001 TTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCTACAAAGAA 104693060 Query 42487 CGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTG-A 42545 |||| || || |||||||||| | || ||| || || | |||| | ||| | Sbjct 104693061 AGCCAGAACGTGAGCTATAAAATATCTCTCATCCAGT-TTCAGAGCTTCCCAGTGTTGAA 104693119 Query 42546 TATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACA 42605 || | || || | || || || | | |||||||| || || || || || || |||| Sbjct 104693120 TACCCTTGGAAAGGTCCACCTCCTTGGCAGTCCAAAAGGAGGCCTCAGCTTTCTTGTACA 104693179 Query 42606 TATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 | | ||||||||||| |||| ||| || || | |||||| Sbjct 104693180 TCTGCCAGATATCATAGTATTCAATGGGAAAGACAACAAA 104693219 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || |||||||| || ||||| ||||| |||||||| || ||||||||||| || || | Sbjct 102463783 ACCTGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATG 102463724 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 ||||||||||| |||| ||| || |||||||| ||||| ||||| || || | | || | Sbjct 102463723 GACTCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 102463664 Query 71263 CTATTTCTAAGACCAT 71278 || || || | ||||| Sbjct 102463663 CTGTTCCTTATACCAT 102463648 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 71374 GATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAAT 71433 ||||| |||| || || || || || | | | |||||||||||| || || || | Sbjct 102460835 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTGGCTAGTTCACAGCTGGCTTCCAGG 102460776 Query 71434 GCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCA 71493 |||||||| ||||||||||| || |||| |||||| | || ||||| ||||| ||| Sbjct 102460775 GCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTCA 102460716 Query 71494 AATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGT 71553 || || || | | || || || || |||||||| ||||| || ||||| || || || Sbjct 102460715 AAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGC 102460656 Query 71554 CTGTGTCTCTTATTAGA 71570 | || | ||||| || Sbjct 102460655 CGATGGCGTTTATTTGA 102460639 Score = 89.7 bits (98), Expect = 7e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 72397 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 72456 ||||||| || | || | || || ||||| || | |||||||| || || || ||| Sbjct 102451063 CTAGACAGCTGTGGGCGGTTGGTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAAC 102451004 Query 72457 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATT 72516 || || ||||| ||||| ||||| || ||||| || | || ||||| || || || Sbjct 102451003 CACTTCTCAGAAAGTAGGTTGTAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATC 102450944 Query 72517 CCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCA 72555 || || | || | ||| ||||||||||| ||||||||| Sbjct 102450943 CCCACAGAAACCCTCATCAACATATGCTGTGGTCTTTCA 102450905 Score = 87.8 bits (96), Expect = 2e-12 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| ||||| || |||||||| || |||||| ||| | || || || || || || | Sbjct 102467061 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 102467002 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 | | ||||| || ||||||||||| || || || || || ||||| || | | |||| Sbjct 102467001 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 102466942 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | |||||||| | || ||||| | | |||| | || || |||| Sbjct 102466941 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 102466891 >seq9 Length=156508116 Score = 233 bits (258), Expect = 3e-56 Identities = 615/927 (66%), Gaps = 20/927 (2%) Strand=Plus/Plus Query 41719 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGAG---ACATAACTCCCATTTT 41775 |||||||||| || | || | ||| ||| | || | || |||| |||||||| Sbjct 73422145 TTAAAAGTCAGCACCCAAGGTAAACGAATTCT-TTGTGGAATTCACATGACTCCCATCCA 73422203 Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835 || || ||||| || || || || || || || ||||||||||| ||||| |||||||| Sbjct 73422204 CTGATACTCACCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 73422263 Query 41836 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 41895 |||||| ||||| || || || | |||| || ||||| |||| || || | Sbjct 73422264 CATGAAGTCAAATGGGTTTCCTACTCTGAAAATCTTGTTAAAACCCAGCTCCAGCATAAG 73422323 Query 41896 TCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 41955 |||| || | ||||| || || ||||||| || || || | || || | Sbjct 73422324 CCTATTGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTTATCTCGATCAGCAT 73422383 Query 41956 AACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGA 42015 || || | ||| | | || | | || || || | | ||| | || || Sbjct 73422384 CACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCTAAACTCGTTGGCGATTATTTC 73422443 Query 42016 TCTTACTGTTT-CTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 | ||||| | | |||| | | | | || | | || || ||||||| | | || | Sbjct 73422444 TTTTACTCTCTGCTTCGTTGGCTTG-TATACCAGGTGCTTGAACATCAGGTAGACAAAGT 73422502 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 | ||||| | |||||| ||||| ||||| | || |||||||| || || || |||| | Sbjct 73422503 CCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCACCA 73422562 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA-GAAGATTCCTTCT 42193 | || | || || ||||| ||||| | ||||| || |||||||| ||||||| |||| Sbjct 73422563 GTCCCTGTTTCTTGAGCCAGAATATCGGTGCAAAAGAACCAGAAAAAGAAGATTGGTTCT 73422622 Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 42250 || || |||||||| | || || ||| ||| | | | |||| |||| | Sbjct 73422623 ACCGCAGCAAAGGCCACAACTCGTTCTGCATGTGTAGCTTCTTTGTCCCCAGTCCAATGC 73422682 Query 42251 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 42310 ||||| || ||||||| |||| ||||| ||||| || ||||| || ||||| Sbjct 73422683 AAGGCCCAGTCAGCCTTCT------CACA-GGCATTGTTTCAATAGCATTGAAAAGATAT 73422735 Query 42311 tttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGA 42370 | |||||| || |||||||| || || || || | ||||| ||||||| || || Sbjct 73422736 TCTTTTTCTTTGGGATCTTTAATGTAAGTGTCAATAAGGAGACTGTACATTTTAGAGTGT 73422795 Query 42371 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCT 42430 ||| ||| || | | || || || || ||||| | ||||| ||||| || |||||| Sbjct 73422796 ATGCCTTCCCTGCCAGTTTGGAAGCCATA-AAACAGCCAGCCTCTGTAACTTGAACTTCT 73422854 Query 42431 GTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCC 42490 | |||||| || | || ||| | || | ||| || ||||| || |||| || ||| Sbjct 73422855 TGGCTAAATCGCTCCACCAAGTTTGCATTGAGTATGCCATCACTCCCTACAAAGAAAGCC 73422914 Query 42491 AATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATATCT 42550 | || || |||||||| | | || || ||| || | |||| | |||| || Sbjct 73422915 AGAACGTGAGCTATAAAATGTCTCTCATCGGGT-TTCAGAGCTTCCCAGTGCTGATCTCC 73422973 Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610 || || | || || || || | |||||||| | || || || || || ||||| | | Sbjct 73422974 TTGGAAAGGTCCACCTCCTCAGCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACATCTGC 73423033 Query 42611 CAGATATCATGATATTGAATTGGGAAA 42637 ||||||||||| || | | ||||||| Sbjct 73423034 CAGATATCATGGTACT-AGATGGGAAA 73423059 >seq29 Length=120129022 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||| ||||| ||||| | || |||||||| || || || ||||| || || || || | Sbjct 24711803 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 24711744 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| || || |||||||||||||||||||| || ||||||| Sbjct 24711743 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 24711684 Query 42207 C 42207 | Sbjct 24711683 C 24711683 Score = 89.7 bits (98), Expect = 7e-13 Identities = 104/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 41719 TTAAAAGTCAACATCTAAAGAAAAATGATTGTCT-TCT--TGAGACATAACTCCCATTTT 41775 ||| |||||| |||| || | |||| || ||| || | ||||| |||||||| | Sbjct 24713232 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTCTCTGTCGAATTCGACATGACTCCCATCCT 24713173 Query 41776 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTTC 41835 || || || || || || || || || || || ||||||||||| | ||| |||||||| Sbjct 24713172 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 24713113 Query 41836 CATGAAATCAAACGGATT 41853 |||||| ||||||||||| Sbjct 24713112 CATGAAGTCAAACGGATT 24713095 >seq32 Length=104043685 Score = 107 bits (118), Expect = 3e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148 ||||| || || || | ||| || ||||| || ||||| ||||| ||||| | ||| || Sbjct 37937217 TCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGTCCAGGCATGAGGCCTCTCTTCTTT 37937276 Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 ||||| ||||| | |||||||||||||| ||||| |||||||| || || |||||||| Sbjct 37937277 AGCCAGAATATTGCAGCAAATGATCCAGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 37937335 >seq28 Length=122082543 Score = 93.3 bits (102), Expect = 6e-14 Identities = 207/306 (68%), Gaps = 16/306 (5%) Strand=Plus/Plus Query 174402 CTTTTGCCAACACAGAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAG 174461 ||||||| ||||| || || |||| |||||||||||| | ||| || || || || Sbjct 83069969 CTTTTGCAAACACGGATGGGGGATTTTTGTTCATTGGTTTGGATGGCAAAACCCAGCAAA 83070028 Query 174462 TAATTGGATTC-ACGGTGGGTCACGA-CTACCTCAGACTGGTAGAGAATGATATAGAAAA 174519 | ||||| || | | | | | || | | ||| || |||||| ||| |||||||| Sbjct 83070029 TTATTGGTTTTGAAGCAGAG--AAGAGCGATCTCGTGCTTCTAGAGAGTGAAATAGAAAA 83070086 Query 174520 GCATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACGC 174579 ||| ||| || | ||| || ||||||||| |||| ||| | ||||||||| | Sbjct 83070087 GCACATCCGGCAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACAC 83070146 Query 174580 GTGTCGATTCATCAAGGTATATAAACCTGGGGATGAGACTACCTCGACATACATGTGTGC 174639 ||| ||||||| | || | ||| | || | || | | |||| ||||||| Sbjct 83070147 GTGCAAATTCATCGAAGTGCACAAATCCGGAGCTGTG------TGTGCATATGTGTGTGC 83070200 Query 174640 TATCAAAGTGGAAAGATGCTGTTGTGCTGTGTT---TGCAGATTGGCCAGAATCATGGTA 174696 ||| |||||| |||| ||| ||||| || || |||||| ||| || || ||| | Sbjct 83070201 GCTCAGAGTGGAGAGATTCTGCTGTGCAGTATTCGCTGCAGA---GCCCGAGTCCTGGCA 83070257 Query 174697 TATGGA 174702 | |||| Sbjct 83070258 TGTGGA 83070263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671137463427320