Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq30 333 3e-86 seq23 286 4e-72 seq9 246 4e-60 seq29 114 2e-20 seq32 111 2e-19 seq28 95.1 2e-14 >seq30 Length=120421639 Score = 333 bits (368), Expect = 3e-86 Identities = 609/891 (68%), Gaps = 12/891 (1%) Strand=Plus/Minus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 ||| ||| | | | | || || ||| || ||||| || || ||||| ||||| ||||| Sbjct 3353946 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 3353887 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119 ||||| || || ||||| |||||||| ||||| | | | |||| ||| ||||| Sbjct 3353886 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 3353827 Query 33120 CAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33179 | ||| || ||||| || || || || || || || |||| ||| |||| || Sbjct 3353826 AAGTTCTACAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACACAGTT 3353767 Query 33180 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 33239 |||||| || || ||| || | || | || | ||| || || ||||| || || Sbjct 3353766 CATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 3353707 Query 33240 ATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACAT 33299 ||| | || || || || | ||||| || | || | || |||||| Sbjct 3353706 ATCAGCAATGATTTCCCTCACTCTGTCTTC------TGAAGGCTTGTACTG---AAACAT 3353656 Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 || || || || || ||||| ||||| || || || || || ||||| || ||||| || Sbjct 3353655 CAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAAGT 3353596 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 ||||| ||||| ||||| | ||| || ||||| ||||| | ||| ||||||||||| || Sbjct 3353595 CAGTCCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAGAA 3353536 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG---CTGTC 33476 | | |||||||| || ||||||||||| | | ||| || ||| || | || || Sbjct 3353535 GGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTATC 3353476 Query 33477 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33536 |||||| ||||| | || || || || || ||| | ||||| ||||| || || Sbjct 3353475 TGCTATCCAGCGCAGAGCCTAGTCTGCTTTTTTCTTAACATATGGCATTGTTTCAATTGC 3353416 Query 33537 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATA 33596 ||||| | | | | ||| || |||| | | ||||| || || | | ||| || Sbjct 3353415 GTTAAATAAAAATTCCCTTTTCTTTGGATCTCTGATGTAAGTGTCTATTAGTAAACTGTA 3353356 Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656 ||| || || |||| || || ||| |||||||| || ||||| || || ||| | Sbjct 3353355 CATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTCCGG 3353296 Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716 || ||| || || || ||| || ||| |||| |||||||| || ||||| |||||||| Sbjct 3353295 AACCTGGACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACTGGC 3353236 Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCA 33776 ||||||||| || || | || |||||||| || ||||| | | | || || ||||| Sbjct 3353235 TGCAAAAAAGGCTAAGATGTGGGAGATAAAATACTTCTCGTCGGATTTAAGCTTGTTCCA 3353176 Query 33777 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33836 | | || | || || | || || ||||| ||||||| || |||||| ||| | Sbjct 3353175 GTGAGGGAGGTTCTTTGACAAGTCAACCTCTTCTCCTGTCCAGAAAGATGCCCGTGCTTG 3353116 Query 33837 TTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 |||||||| ||||||| ||| ||| |||||||| || || ||||| || Sbjct 3353115 CTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 3353065 Score = 188 bits (208), Expect = 9e-43 Identities = 212/283 (75%), Gaps = 3/283 (1%) Strand=Plus/Minus Query 33289 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 33348 || || ||||||| || || || || ||||| | |||||||||||| ||||| || || Sbjct 12680223 TGCTTGAACATCAGGCAGGCAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 12680164 Query 33349 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAAT 33408 |||||||| || || || ||||| || || || || || ||||| ||||| || || || Sbjct 12680163 TTGGAAAATGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCACAATATTGATGCAAAA 12680104 Query 33409 GATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---A 33465 || || |||||||||||||||||||| || |||||||| | || ||| |||||||| | Sbjct 12680103 GAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGGCCACAACTCTTTCTCCATACGCA 12680044 Query 33466 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 33525 | | |||| ||||| ||||| || |||||||| || ||||||||||| Sbjct 12680043 GCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATA 12679984 Query 33526 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTT 33568 ||||| || ||||| |||||||| | | |||| || ||||| Sbjct 12679983 GTTTCAATAGCATTGAAGAGATATTCTCTTTCCTTGGGATCTT 12679941 Score = 93.3 bits (102), Expect = 5e-14 Identities = 122/167 (73%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 32958 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGA--GACATAACTCCCATTTT 33014 ||| |||||| |||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 12679743 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAAATCGACATGACTCCCATCCT 12679802 Query 33015 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33074 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 12679803 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 12679862 Query 33075 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCA 33121 |||||| ||||||||||| || | |||| || ||||| |||| Sbjct 12679863 CATGAAGTCAAACGGATTTTCTACTCTGAAAATCTTGTTAAAACCCA 12679909 >seq23 Length=145441459 Score = 286 bits (316), Expect = 4e-72 Identities = 630/939 (67%), Gaps = 29/939 (3%) Strand=Plus/Plus Query 32958 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA----GACATAACTCCCATTT 33013 ||| |||||| ||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 104692298 TTAGAAGTCAGCATGCAAGGTAAAAGAATTCTCTG-TGGAATTCGACATGACTCCCATCC 104692356 Query 33014 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 33073 | || || || || || | || || || || | ||||||||||| | ||| ||||||| Sbjct 104692357 TCTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCTTCTAGTGAAATATTTT 104692416 Query 33074 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCA---GAAA 33130 || |||| ||||| ||||| || | |||| || |||| |||| || | || Sbjct 104692417 CCGTGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACACCCAGCTCCAGTGGAA 104692476 Query 33131 TCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA 33190 | || || || | ||||| || || ||||||| ||||| || | | Sbjct 104692477 GC---CTGTCAGCCAAAAATTCAATGTACTGCTTCATCAAAGTGCAATTTGCCCCGAAGA 104692533 Query 33191 GTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGT-TATA 33249 | || || || | |||| | | ||||| || || | || || | | || | | Sbjct 104692534 GCTTCACAGGCAAAGCCTCCATGAGAAACTCCTGCCCTATCCTAACAGTGTTGGTGTTTT 104692593 Query 33250 ATAGATCTAACGGTTT-CTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGC 33308 ||| | | || ||| || || | | | | || | | || || ||||||| || || Sbjct 104692594 ATATCTTTTACTCTTTGCTCCAATGGCTTG-TGTACCAGGTGCTTGAACATCAGGCAGGC 104692652 Query 33309 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 33368 | || ||||| | ||||| |||||| ||||| || || ||||||| || || || || Sbjct 104692653 AGAGTCCCAGTGTAAACCCTTGTCTCTGCTAATAAGCTCATTGGAAAGTGTAAGACCCGG 104692712 Query 33369 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCC 33428 ||| || | || || || ||||| ||||| || || |||||||| ||| Sbjct 104692713 CATCAGTCTGCGATTCTTGAGCCAGAATATCGATGC------------AAAGAAGACTCC 104692760 Query 33429 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA 33485 ||| || |||||||||| | || || |||||||| || | |||| |||| Sbjct 104692761 TTCCACCACAGCAAAGGCCACAACTCATTCTCCATATGGGGACTCTTTGTCCCCAGTCCA 104692820 Query 33486 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33545 ||||| || |||||||| || ||||||||||| |||| || ||||| ||||| Sbjct 104692821 ACGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATTGTTTAAATAGCATTGAAGAG 104692880 Query 33546 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33605 ||| | | |||| || |||||||| ||||| || || | |||| |||||||| || Sbjct 104692881 ATATTCTCTTTCCTTGGAATCTTTAATGTAAGTGTCAATAAGGGGACTGTACATTTCAGA 104692940 Query 33606 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 33665 || |||||||| ||||| || | || || |||||||| | ||||| |||| || || Sbjct 104692941 GTGTATGTTTTCCATGGCAATTTAGAAGCCATAGAAACAGCGGGCCTCTGTAACTTGAAC 104693000 Query 33666 TTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 33725 |||| | |||||| ||| |||| |||||||| ||||| || ||||| ||| |||| || Sbjct 104693001 TTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCTACAAAGAA 104693060 Query 33726 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGAT 33785 |||| || || |||||||||| | || || || | || | ||| | | || Sbjct 104693061 AGCCAGAACGTGAGCTATAAAATATCTCTCATCCAGTTTCAGAGCTTCCCAGTGTTGAAT 104693120 Query 33786 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 33845 | | || || | || || || | | |||||||| || ||||| || || || ||||| Sbjct 104693121 ACCCTTGGAAAGGTCCACCTCCTTGGCAGTCCAAAAGGAGGCCTCAGCTTTCTTGTACAT 104693180 Query 33846 GTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | |||||| ||||| |||| || || || | |||||| Sbjct 104693181 CTGCCAGATATCATAGTATTCAATGGGAAAGACAACAAA 104693219 Score = 116 bits (128), Expect = 5e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || |||||||| || ||||| ||||| |||||||| || ||||||||||| || || | Sbjct 102463783 ACCTGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATG 102463724 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 ||||||||||| |||| ||| || |||||||| ||||| ||||| || || | | |||| Sbjct 102463723 GACTCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAA 102463664 Query 62457 CTATTTCTAAGACCGTA 62473 || || || | ||| || Sbjct 102463663 CTGTTCCTTATACCATA 102463647 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 62568 GATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAAT 62627 ||||| |||| || || || || || | || || ||||||||||| || || || | Sbjct 102460835 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTGGCTAGTTCACAGCTGGCTTCCAGG 102460776 Query 62628 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCA 62687 || || || ||||||||||| ||||||| |||||||| || ||||| |||| ||| Sbjct 102460775 GCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTCA 102460716 Query 62688 AATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGT 62747 || || || | | || || || || || ||||| ||||| || ||||| || || || Sbjct 102460715 AAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGC 102460656 Query 62748 CTATGTCTCTTATTAGA 62764 | ||| | ||||| || Sbjct 102460655 CGATGGCGTTTATTTGA 102460639 Score = 93.3 bits (102), Expect = 5e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 63591 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 63650 ||||||| || | || | || || ||||| || | |||||||| || || || ||| Sbjct 102451063 CTAGACAGCTGTGGGCGGTTGGTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAAC 102451004 Query 63651 CATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATT 63710 || || ||||||||||| ||||| || ||||| || | || ||||| || ||||| Sbjct 102451003 CACTTCTCAGAAAGTAGGTTGTAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATC 102450944 Query 63711 CCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCA 63749 || || | || | ||| ||||| ||||| ||||||||| Sbjct 102450943 CCCACAGAAACCCTCATCAACATATGCTGTGGTCTTTCA 102450905 Score = 93.3 bits (102), Expect = 5e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| ||||| || |||||||| || |||||| || | || || || |||||||| | Sbjct 102467061 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 102467002 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 | | ||| || || ||||||||||| || || || || || ||||| || | | |||| Sbjct 102467001 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 102466942 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62232 | || | |||||||| | || ||||| | | |||| | || || |||| Sbjct 102466941 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 102466891 >seq9 Length=156508116 Score = 246 bits (272), Expect = 4e-60 Identities = 619/929 (67%), Gaps = 24/929 (3%) Strand=Plus/Plus Query 32958 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGAG---ACATAACTCCCATTTT 33014 |||||||||| || | || | ||| ||| | || | || |||| |||||||| Sbjct 73422145 TTAAAAGTCAGCACCCAAGGTAAACGAATTCT-TTGTGGAATTCACATGACTCCCATCCA 73422203 Query 33015 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33074 || || ||||| || || || || || || || || |||||||| ||||| |||||||| Sbjct 73422204 CTGATACTCACCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 73422263 Query 33075 CATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCAA 33134 |||||| ||||| || || || | |||| || ||||| |||| || || | Sbjct 73422264 CATGAAGTCAAATGGGTTTCCTACTCTGAAAATCTTGTTAAAACCCAGCTCCAGCATAAG 73422323 Query 33135 TCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTT 33194 |||| || || ||||| || || ||||||| || || || | || || | Sbjct 73422324 CCTATTGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTTATCTCGATCAGCAT 73422383 Query 33195 AACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAGA 33254 || || | ||| | | || | | || || || | | | | | || || Sbjct 73422384 CACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCTAAACTCGTTGGCGATTATTTC 73422443 Query 33255 TCTAACGGTTTCTTCACTCGGTGGATGCAATAAA---TGTTTAAACATCAAACATGCGAA 33311 | | || | ||| | ||| ||| | ||| || || ||||||| | | || Sbjct 73422444 TTTTAC--TCTCTGCT-TCGTTGGCTTGTATACCAGGTGCTTGAACATCAGGTAGACAAA 73422500 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 || ||||| | |||||||||||| ||||| || || |||||||| || || || |||| Sbjct 73422501 GTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCAC 73422560 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG-AAAAGAAGATTCCTT 33430 || || | || || ||||| ||||| | || || || |||| ||||||||||| || Sbjct 73422561 CAGTCCCTGTTTCTTGAGCCAGAATATCGGTGCAAAAGAACCAGAAAAAGAAGATTGGTT 73422620 Query 33431 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCAT---AACCGGCGCTGTCATGTATCCACT 33487 |||| ||||||||||| | || || ||| ||| | | | |||| |||| | Sbjct 73422621 CTACCGCAGCAAAGGCCACAACTCGTTCTGCATGTGTAGCTTCTTTGTCCCCAGTCCAAT 73422680 Query 33488 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33547 ||||| || ||||||| ||| |||||| ||||| || ||||| || |||| Sbjct 73422681 GCAAGGCCCAGTCAGCCTTCT------CAC-AGGCATTGTTTCAATAGCATTGAAAAGAT 73422733 Query 33548 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33607 | | |||||| || |||||||| ||||| || || | ||||| ||||||| || | Sbjct 73422734 ATTCTTTTTCTTTGGGATCTTTAATGTAAGTGTCAATAAGGAGACTGTACATTTTAGAGT 73422793 Query 33608 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTT 33667 | ||| ||| || | | || || || || ||||| | |||||| |||| || |||| Sbjct 73422794 GTATGCCTTCCCTGCCAGTTTGGAAGCCATA-AAACAGCCAGCCTCTGTAACTTGAACTT 73422852 Query 33668 CTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 33727 || | |||||| ||| |||| ||| |||| | ||| || ||||| || |||| || | Sbjct 73422853 CTTGGCTAAATCGCTCCACCAAGTTTGCATTGAGTATGCCATCACTCCCTACAAAGAAAG 73422912 Query 33728 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 33787 ||| || || |||||||| | | || || ||| | || |||| | |||| | Sbjct 73422913 CCAGAACGTGAGCTATAAAATGTCTCTCATCGGGTTTCAG-AGCTTCCCAGTGCTGATCT 73422971 Query 33788 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGT 33847 | || || | || || || || | |||||||| | ||||| || || || ||||| | Sbjct 73422972 CCTTGGAAAGGTCCACCTCCTCAGCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACATCT 73423031 Query 33848 TCCAGATGTCATAATATTGGATTGGGAAA 33876 |||||| |||| || | || ||||||| Sbjct 73423032 GCCAGATATCATGGTACTAGA-TGGGAAA 73423059 >seq29 Length=120129022 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||||||||| ||||| || || |||||||| || || || ||||| || || || || | Sbjct 24711803 CCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCT 24711744 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| ||||| || || || || || |||||||||||||||||||| || ||||||| Sbjct 24711743 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGG 24711684 Query 33446 C 33446 | Sbjct 24711683 C 24711683 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 32958 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCT--TGAGACATAACTCCCATTTT 33014 ||| |||||| |||| || | |||| || ||| || | ||||| |||||||| | Sbjct 24713232 TTAGAAGTCAGCATCCAAGGTAAAAGAGTTCTCTGTCGAATTCGACATGACTCCCATCCT 24713173 Query 33015 TTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTTC 33074 || || || || || || || || || || || || |||||||| | ||| |||||||| Sbjct 24713172 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 24713113 Query 33075 CATGAAATCAAACGGATT 33092 |||||| ||||||||||| Sbjct 24713112 CATGAAGTCAAACGGATT 24713095 >seq32 Length=104043685 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || || || || || ||||| || ||||| || ||||| ||||| ||||| | ||| || Sbjct 37937217 TCATCCCTGCTGATCAGTTCATTTGAAAAAGTCAGTCCAGGCATGAGGCCTCTCTTCTTT 37937276 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 ||||| ||||| | ||| ||||||||||| ||||| |||||||| || ||||||||||| Sbjct 37937277 AGCCAGAATATTGCAGCAAATGATCCAGAGAAGAAAATTCCTTCCACAGCAGCAAAGGC 37937335 >seq28 Length=122082543 Score = 95.1 bits (104), Expect = 2e-14 Identities = 230/344 (67%), Gaps = 16/344 (5%) Strand=Plus/Plus Query 166008 TTTACCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAGTA 166067 ||| | ||||| | || ||||||||||||||||| | ||| || || || || | Sbjct 83187207 TTTGCAAACACTGATGGGGGATATTTGTTCATTGGCTTGGATGGCAAAACGCAGCAAATT 83187266 Query 166068 ATTGGATTC-ACGGTGGGTCATGA-CTACCTCAGACTGGTAGAGAATGATATAGAAAAGC 166125 ||||| || | | | | | || | | ||| || |||||| ||| ||||||||| Sbjct 83187267 ATTGGTTTTGAAGCAGAG--AAGAGCGATCTCGTGCTTCTAGAGAGTGAAATAGAAAAGT 83187324 Query 166126 ATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACACGT 166185 ||| || || | ||| || ||||||||| |||| ||| | ||||||||||||| Sbjct 83187325 GCATCCAACAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACACGT 83187384 Query 166186 GTCGATTCATCAAGGTATATAAACCTGGGGATGAGGCTACCTCGACATACGTGTGCGCTA 166245 | ||||||| | || | ||| | || | || | | |||| |||||||| | Sbjct 83187385 GCAAATTCATCGAAGTGCACAAATCCGGAGCTGTG------TGTGCATATGTGTGCGCGA 83187438 Query 166246 TCAAAGTGGAAAGATGCTGTTGTGCTGTGTT---TGCAGATTGGCCAGAATCATGGTATA 166302 ||| |||||| | | ||| ||||| ||||| |||||| ||| || || ||| | Sbjct 83187439 TCAGAGTGGAGAAGTTCTGCTGTGCAGTGTTCGCTGCAGA---GCCTGAGTCCTGGCACG 83187495 Query 166303 TGGATACTAATGGTATCAAGAAGTATTCTCCAGATGAATGGGTG 166346 |||| | || | |||| || | | |||| ||||||||| Sbjct 83187496 TGGAAGGCAGCTGTGTGAAGAGGTTTACCACAGAGGAATGGGTG 83187539 Score = 89.7 bits (98), Expect = 6e-13 Identities = 206/306 (67%), Gaps = 16/306 (5%) Strand=Plus/Plus Query 166006 CTTTTACCAACACAAAGGGTGGATATTTGTTCATTGGAGTTGATAATAATACACACAAAG 166065 ||||| | ||||| | || |||| |||||||||||| | ||| || || || || Sbjct 83069969 CTTTTGCAAACACGGATGGGGGATTTTTGTTCATTGGTTTGGATGGCAAAACCCAGCAAA 83070028 Query 166066 TAATTGGATTC-ACGGTGGGTCATGA-CTACCTCAGACTGGTAGAGAATGATATAGAAAA 166123 | ||||| || | | | | | || | | ||| || |||||| ||| |||||||| Sbjct 83070029 TTATTGGTTTTGAAGCAGAG--AAGAGCGATCTCGTGCTTCTAGAGAGTGAAATAGAAAA 83070086 Query 166124 GCATATCAAAAGACTTCGTGTTGTGCATTTCTGTGAGAAGAAAGAGGACATCAAGTACAC 166183 ||| ||| || | ||| || ||||||||| |||| ||| | ||||||||||| Sbjct 83070087 GCACATCCGGCAGCTGCCTGTCACTCACTTCTGTGAGGAGAAGGAGAAGATCAAGTACAC 83070146 Query 166184 GTGTCGATTCATCAAGGTATATAAACCTGGGGATGAGGCTACCTCGACATACGTGTGCGC 166243 ||| ||||||| | || | ||| | || | || | | |||| ||||| || Sbjct 83070147 GTGCAAATTCATCGAAGTGCACAAATCCGGAGCTGTG------TGTGCATATGTGTGTGC 83070200 Query 166244 TATCAAAGTGGAAAGATGCTGTTGTGCTGTGTT---TGCAGATTGGCCAGAATCATGGTA 166300 ||| |||||| |||| ||| ||||| || || |||||| ||| || || ||| | Sbjct 83070201 GCTCAGAGTGGAGAGATTCTGCTGTGCAGTATTCGCTGCAGA---GCCCGAGTCCTGGCA 83070257 Query 166301 TATGGA 166306 | |||| Sbjct 83070258 TGTGGA 83070263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945588124120