Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq48 131 4e-25 seq26 131 4e-25 seq8 131 4e-25 seq31 129 1e-24 seq28 129 1e-24 seq22 125 2e-23 seq30 120 7e-22 seq7 114 3e-20 seq23 107 5e-18 seq185 105 2e-17 seq25 104 6e-17 seq37 100 7e-16 seq33 98.7 2e-15 seq36 86.0 1e-11 >seq48 Length=23158 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 14485 CCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGAC 14544 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| | || || || || |||||||| | ||| ||| | || Sbjct 14545 AAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 14604 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||||| || | ||| || Sbjct 14605 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACC 14664 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| || ||||| || || ||||| || || |||||||| Sbjct 14665 TCGAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 14711 >seq26 Length=124595110 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 83409886 CCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGAC 83409827 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| | || || || || |||||||| | ||| ||| | || Sbjct 83409826 AAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 83409767 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||||| || | ||| || Sbjct 83409766 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACC 83409707 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| || ||||| || || ||||| || || |||||||| Sbjct 83409706 TCGAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 83409660 >seq8 Length=160039680 Score = 131 bits (144), Expect = 4e-25 Identities = 146/195 (75%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| ||||| || ||||| | || || || || ||| Sbjct 5751094 TCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 5751035 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || |||||||||||||| || || |||||||| Sbjct 5751034 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTC 5750975 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 5750974 TCAATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 5750915 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 5750914 AAGATCTGCATTTTG 5750900 >seq31 Length=124902244 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| ||||| || ||||| | || || || || ||| Sbjct 46084544 TCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 46084485 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || |||||||||||||| || || |||||||| Sbjct 46084484 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTC 46084425 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 46084424 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 46084365 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 46084364 AAGATCTGCAT 46084354 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| ||||| || ||||||| || || || || ||| Sbjct 46084772 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAG 46084713 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || |||||||||||||| || || |||||||| Sbjct 46084712 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTC 46084653 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| || ||||| ||||| ||| Sbjct 46084652 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 46084593 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 46084592 AAGATCTGCAT 46084582 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || | ||| ||||| || ||||| | || || || || ||| Sbjct 46084316 TCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 46084257 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || |||||||||||||| || || |||||||| Sbjct 46084256 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTC 46084197 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 46084196 TCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 46084137 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 46084136 AAGATCTGCATTTTG 46084122 >seq28 Length=122082543 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| ||||| || ||||| | || || || || ||| Sbjct 62552564 TCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 62552505 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || |||||||||||||| || || |||||||| Sbjct 62552504 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTC 62552445 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 62552444 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 62552385 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 62552384 AAGATCTGCAT 62552374 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || | ||| ||||| || ||||| | || || || || ||| Sbjct 62552336 TCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 62552277 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || |||||||||||||| || || |||||||| Sbjct 62552276 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTC 62552217 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| ||| Sbjct 62552216 TCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 62552157 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 62552156 AAGATCTGCATTTTG 62552142 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| ||||| || ||||||| || || || || ||| Sbjct 62553020 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAG 62552961 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || |||||||||||||| || || ||||| || Sbjct 62552960 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTC 62552901 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || | ||||| ||||| |||||||| ||||| ||| Sbjct 62552900 TCGATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 62552841 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 62552840 AAGATCTGCAT 62552830 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || || || | ||| ||||| || ||||| | || || || || ||| Sbjct 62552792 TCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 62552733 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || |||||||||||||| || || |||||||| Sbjct 62552732 ATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTC 62552673 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| || ||||| ||||| ||| Sbjct 62552672 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACG 62552613 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 62552612 AAGATCTGCAT 62552602 Score = 105 bits (116), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| ||||| || ||||||| || || || || ||| Sbjct 73771961 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAAG 73772020 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || |||||||||||||| || || |||||||| Sbjct 73772021 ATCAGCCTCTGCTGGTCAGG-GGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTC 73772079 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || | |||| ||||| || ||||| ||| | | Sbjct 73772080 TCGATGGTGTCACTGGGCTCCACCTCTAAGGTGAGGGTCTTGCCAGTCAGGGTCGTCGTG 73772139 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 73772140 AAGATCTGCATTTTG 73772154 >seq22 Length=149736546 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 122457130 CCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGAC 122457071 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| | || || || || |||||||| | ||| ||| | || Sbjct 122457070 AAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 122457011 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || ||| |||||| || | ||| || Sbjct 122457010 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTCCTATAGTGTCCGAGGGTTCAACC 122456951 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| || ||||| || || ||||| || || |||||||| Sbjct 122456950 TCGAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 122456904 Score = 109 bits (120), Expect = 1e-18 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 288249 ACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAG 288308 ||| || ||||| | || ||||||| ||| || ||||| || || |||| | | Sbjct 6329998 ACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTTAGACAA 6330057 Query 288309 CGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGAT 288368 || | || ||||| | || || || || |||| ||| | ||| ||| | || || Sbjct 6330058 AGTCAGGCCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAAT 6330117 Query 288369 TCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTC 288428 |||||| ||||||||||| || || || || |||||||||| || | ||| || | Sbjct 6330118 TCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTG 6330177 Query 288429 GAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||| || ||||| || || ||||| || || |||||||| Sbjct 6330178 GAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 6330222 Score = 96.9 bits (106), Expect = 8e-15 Identities = 135/188 (72%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 288290 GGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC 288349 |||| || || || | ||| ||||| || ||||| | || || || || |||| ||| | Sbjct 60461932 GGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGACCAGCC 60461991 Query 288350 GCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAG 288409 ||| || | ||||| || |||||||||||||| || || |||||||| || | Sbjct 60461992 TCTGCTGGTCAGG-GGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCCTGATGG 60462050 Query 288410 AATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469 || || | || || || || ||||| ||||| || ||||| ||||| | ||| |||| Sbjct 60462051 TGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTGCCTGTCAGGGTCTTCATGAAGATCT 60462110 Query 288470 GCATTATG 288477 ||||| || Sbjct 60462111 GCATTTTG 60462118 >seq30 Length=120421639 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || |||| || || ||||| | Sbjct 12425379 CCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGAC 12425438 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| | || || || || |||| ||| | ||| ||| | || Sbjct 12425439 AAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATGAGGAGGA 12425498 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||| | | || || || |||||||||| || | | ||| || Sbjct 12425499 ATTCCTTCCTTATCCTGGGTCGTGGCCTTTACATTTTCTATAGTGTCCCAGGGTTCAACC 12425558 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||||||||| || ||||| || || ||||| || || ||||||||| || Sbjct 12425559 TCGAGCGTGATGGTTTTCCCTGTAAGGGTCTTCACAAAAATCTGCATTGTG 12425609 >seq7 Length=182113224 Score = 114 bits (126), Expect = 3e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 145510430 CCACCCCAAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGAC 145510489 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| | || || || |||||||| | ||| ||| | || Sbjct 145510490 AAAGTCCGGCCATCTTCCGGAGGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 145510549 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||| | || | || || |||||||||| || | | ||| || Sbjct 145510550 ATTCCTTCCTTATCCTGGGTCTTGACCTTTACATTTTCTATAGTGTCCCAGGGTTCAACC 145510609 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||||||||| || ||||| || || ||||| || || |||||||| ||| Sbjct 145510610 TCGAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAAAAATCTGCATCATG 145510660 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 5/193 (3%) Strand=Plus/Minus Query 288289 TGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGA 288348 ||||| || || || | ||| |||| || ||||||| || ||||| || ||||| || Sbjct 121405428 TGGATGTTGTAATCAGAGAGGGTGCAGCCATCTTCTAGCTGCTTTCCGGCAAAGATGAGC 121405369 Query 288349 CGCTGTTGAGAATCTGGGATTCC----TTCTTTATCCTGGATTTTCGCTTTCACGTTTTC 288404 | || || | ||||| || ||||||||||||||| || || |||||||| || Sbjct 121405368 CTTTGCTGGTCAGGGGGGATGCCCTCTTTCTTTATCCTGGATCTT-GCCTTCACGTTCTC 121405310 Query 288405 TATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || | || || || || ||||| ||||| |||||| ||||| |||| Sbjct 121405309 GATGGTGTCACTGGGCTCCACATCTAGGGTGATGGTCTTGTTGGTCAGGGTCTTCTCGAA 121405250 Query 288465 TATCTGCATTATG 288477 || |||||| || Sbjct 121405249 GATTTGCATTTTG 121405237 >seq23 Length=145441459 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 51458286 CCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGAC 51458227 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||| | || || || || |||| ||| | || ||| | || Sbjct 51458226 AAAGTCTGGCCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTACTGATCAGGAGGA 51458167 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || ||||| |||| || | ||| || Sbjct 51458166 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCCATAGTGTCCGAGGGTTCAACC 51458107 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| || ||||| || || ||||| || | |||||||| Sbjct 51458106 TCGAGCGTGATGGTTTTCCCCGTAAGGGTCTTCACAGAGATCTGCAT 51458060 >seq185 Length=1462311 Score = 105 bits (116), Expect = 2e-17 Identities = 141/195 (72%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| ||||| || ||||||| || || || || ||| Sbjct 863518 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAAG 863577 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | ||| || | ||||| || |||||||||||||| || || |||||||| Sbjct 863578 ATCAGCCTCTGCTGGTCAGG-GGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTC 863636 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || | |||| ||||| || ||||| ||| | | Sbjct 863637 TCGATGGTGTCACTGGGCTCCACCTCTAAGGTGAGGGTCTTGCCAGTCAGGGTCGTCGTG 863696 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 863697 AAGATCTGCATTTTG 863711 >seq25 Length=129401213 Score = 104 bits (114), Expect = 6e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 111309934 CCACCCCGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGAC 111309993 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| | || || || || |||||||| | ||| ||| | || Sbjct 111309994 AAAGTCCGGCCATCTTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGA 111310053 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||||| || | ||| || Sbjct 111310054 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACC 111310113 Query 288427 TCGAGCGTGATCGTC 288441 ||||||||||| ||| Sbjct 111310114 TCGAGCGTGATGGTC 111310128 >seq37 Length=171031299 Score = 100 bits (110), Expect = 7e-16 Identities = 140/195 (72%), Gaps = 1/195 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | || |||| || ||||| | ||| || ||||| ||| Sbjct 157667596 TCTTTCTGGATGTTGTAATCAGAGAAGGTGCAGCCATCTTCCAGTTGCTTGCCTGCAAAG 157667655 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| || |||||||||||||| || || ||||| || Sbjct 157667656 ATGAGCCTCTGCTG-GTCGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTC 157667714 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || | || || ||||| ||||| || ||||| ||||| || Sbjct 157667715 TCGATGGTTTCACTGGGCTCCATCTCTAGGGTGATGGTCTTGCCAGTCAGGGTCTTCTCG 157667774 Query 288463 AATATCTGCATTATG 288477 || || |||||| || Sbjct 157667775 AAGATTTGCATTTTG 157667789 Score = 84.2 bits (92), Expect = 5e-11 Identities = 137/196 (70%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | ||| || | || ||||||| ||| | || ||| Sbjct 79904650 TCTTTCTGGATGTTGTAATCAGAGAGAGTATGGCCATCTTCTAGTTGCTCGTTGGCAAAG 79904591 Query 288343 ATCAGACGCTGTTGAGAATCTGG-GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | ||| || | || ||| || |||||||||||||| || || |||| || Sbjct 79904590 ATCAGCCTCTGCTGGTCAGGGGGAGATGCCCTCTTTATCCTGGATCTTGGCCTTCATATT 79904531 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 | || | || || | || || || || ||||| ||||| | | ||| ||||| || Sbjct 79904530 CTTGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTCTTACTGTTCATGGTCTTCAC 79904471 Query 288462 GAATATCTGCATTATG 288477 ||| ||||||||| || Sbjct 79904470 GAAGATCTGCATTTTG 79904455 >seq33 Length=98207768 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || || | || ||||||| ||| || |||| || || ||||| | Sbjct 16968835 CCACCAAGAAGGCTCAACACCAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGAC 16968776 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||| | || || || || |||| ||| | ||| ||| | || Sbjct 16968775 AAAGTATGGCCATCTTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGA 16968716 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 | |||||| ||||||||||| || || || || |||||||| | || | ||| || Sbjct 16968715 AGTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATGGTGTCCAGGGGTTCAACC 16968656 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| |||||||| | || ||||| || || |||||||| Sbjct 16968655 TCGAGCGTGATGGTCTTCCCCATAAGGGTCTTCACAAAAATCTGCAT 16968609 >seq36 Length=61431566 Score = 86.0 bits (94), Expect = 1e-11 Identities = 147/212 (69%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| ||| || ||||| || || ||||| | Sbjct 16716018 CCACCACGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGAC 16715959 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || ||||| | | || || || |||| ||| | ||| ||| | || Sbjct 16715958 AAAGTCCGGCCATCTTCCAGCTCTTA-CCAGCAAAGACCAGCCTCTGCTGATGAGGAGGA 16715900 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 ||| |||| || |||||| | || || || || |||||||||| || | ||| || Sbjct 16715899 ATTTCTTCCTTGTCCTGGGTCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACC 16715840 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||||||||| || ||||| | || ||||| Sbjct 16715839 TCGAGCGTGATGGTTTTCCCCATAAGGGTCTT 16715808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179651271335346