Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq48 118 1e-21 seq26 118 1e-21 seq22 118 1e-21 seq16 107 2e-18 seq23 105 7e-18 seq7 100 3e-16 seq31 96.9 4e-15 seq28 96.9 4e-15 seq30 95.1 1e-14 seq1 91.5 2e-13 seq27 89.7 6e-13 seq33 87.8 2e-12 seq185 84.2 2e-11 seq25 84.2 2e-11 >seq48 Length=23158 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | || Sbjct 14499 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 14558 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || |||||||||||||| || || || | |||||| || | || | | ||||| || Sbjct 14559 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 14618 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | ||| || || | | | | ||||| | ||| || |||| ||||||||| Sbjct 14619 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 14678 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || ||||| |||||||| ||||| Sbjct 14679 TTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 14711 >seq26 Length=124595110 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | || Sbjct 83409872 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 83409813 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || |||||||||||||| || || || | |||||| || | || | | ||||| || Sbjct 83409812 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 83409753 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | ||| || || | | | | ||||| | ||| || |||| ||||||||| Sbjct 83409752 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 83409693 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || ||||| |||||||| ||||| Sbjct 83409692 TTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 83409660 >seq22 Length=149736546 Score = 118 bits (130), Expect = 1e-21 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | || Sbjct 122457116 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 122457057 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || |||||||||||||| || || || | |||||| || | || | | ||||| || Sbjct 122457056 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 122456997 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | ||| || || | | | | ||||| | ||| || |||| ||||||||| Sbjct 122456996 CTGGATCTTGGCCTTTACATTTCCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 122456937 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || ||||| |||||||| ||||| Sbjct 122456936 TTTCCCCGTAAGGGTCTTCACAAAGATCTGCAT 122456904 Score = 96.9 bits (106), Expect = 4e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||||| ||| | ||| |||||||||||| ||||| | || || |||| | | || Sbjct 6330010 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTTAGACAAAGTCAGGCCATC 6330069 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || |||||||||||||| || | || | |||||| || | || | | ||||| || Sbjct 6330070 TTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 6330129 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | ||| || || | | | | ||||| | ||| || | || ||||||||| Sbjct 6330130 CTGGATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTGGAGCGTGATGGT 6330189 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || ||||| ||||| || ||||| Sbjct 6330190 TTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 6330222 >seq16 Length=151834684 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| | || | |||| |||| ||| ||| || || || ||||| || | | Sbjct 125387123 CCACCTCTGAGGCGAAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAC 125387182 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || |||||||| || || || || || | ||||||||| | || Sbjct 125387183 AGGGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 125387242 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 42161 | || |||||||||| ||| ||| |||| || | | ||||| || | || || Sbjct 125387243 ATGCCCTCCTTGTCCTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACC 125387302 Query 42162 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||||||||| || || ||||| |||||||| ||||| Sbjct 125387303 TCCAGGGTGATGGTTTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 125387349 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 125405606 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 125405665 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 125405666 ATACTAACGAGGA 125405678 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 125409016 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 125409075 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 125409076 TACTAACGAGGA 125409087 >seq23 Length=145441459 Score = 105 bits (116), Expect = 7e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||| | | || Sbjct 51458272 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCTGGCCATC 51458213 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || |||||||||||||| || | || | || ||| || | || | | ||||| || Sbjct 51458212 TTCCAGCTGCTTACCAGCAAAGACCAGCCTCTACTGATCAGGAGGAATTCCTTCCTTATC 51458153 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | ||| || || | | ||| ||||| | ||| || |||| ||||||||| Sbjct 51458152 CTGGATCTTGGCCTTTACATTTTCCATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGT 51458093 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || ||||| ||| |||| ||||| Sbjct 51458092 TTTCCCCGTAAGGGTCTTCACAGAGATCTGCAT 51458060 >seq7 Length=182113224 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | || Sbjct 145510444 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 145510503 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || | |||||||||| || || || | |||||| || | || | | ||||| || Sbjct 145510504 TTCCGGAGGCTTACCAGCAAAGATCAGCCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 145510563 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | | | || || | | | | ||||| | | ||| || |||| ||||||||| Sbjct 145510564 CTGGGTCTTGACCTTTACATTTTCTATAGTGTCCCAGGGTTCAACCTCGAGCGTGATGGT 145510623 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| ||||| || ||||| ||||| || ||||| Sbjct 145510624 TTTCCCCGTAAGGGTCTTCACAAAAATCTGCAT 145510656 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || || |||||||||||||||| ||| ||||||||||| | ||||||||||||| Sbjct 114103438 CTCCCCGTCAGGAAATCGAACCCTGGTGTCCTGCGTGACAGGCAGGGATACTCACCACTA 114103379 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 114103378 TACTAACGAGGA 114103367 >seq31 Length=124902244 Score = 96.9 bits (106), Expect = 4e-15 Identities = 165/238 (69%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 41971 TAATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATAT 42030 ||||| || | || || || | ||| | |||| |||| || ||| || || || | Sbjct 46084818 TAATTAATAG-CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGT 46084760 Query 42031 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 42090 ||||||||| ||||| || | || ||||||||||| || || || || || | ||||| Sbjct 46084759 TGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCT 46084700 Query 42091 GGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGC 42150 |||| | || | || ||| || ||| ||| || || | || | | ||||| | Sbjct 46084699 GGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCAC 46084640 Query 42151 TCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | | ||||| || | |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 46084639 TGGGCTCCACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 46084582 >seq28 Length=122082543 Score = 96.9 bits (106), Expect = 4e-15 Identities = 165/238 (69%), Gaps = 1/238 (0%) Strand=Plus/Minus Query 41971 TAATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATAT 42030 ||||| || | || || || | ||| | |||| |||| || ||| || || || | Sbjct 62553066 TAATTAATAG-CCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGT 62553008 Query 42031 TGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCT 42090 ||||||||| ||||| || | || ||||||||||| || || || || || | ||||| Sbjct 62553007 TGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCT 62552948 Query 42091 GGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGC 42150 |||| | || | || ||| || ||| ||| || || | || | | ||||| | Sbjct 62552947 GGTCAGGGGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCAC 62552888 Query 42151 TCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | | ||||| || | |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 62552887 TGGGCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 62552830 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | |||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 69041057 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 69040998 Query 57065 TATACTACCGAGGA 57078 ||||||| |||||| Sbjct 69040997 TATACTAACGAGGA 69040984 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 7869849 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 7869790 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 7869789 ATACTAACGAGGA 7869777 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || |||||||||| ||||| || | || ||||||||||| ||||| || Sbjct 73771960 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAA 73772019 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||||||| | || | || ||| || ||| ||| || || | | Sbjct 73772020 GATCAGCCTCTGCTGGTCAG-GGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 73772078 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || | ||||| || | |||| ||| ||||| || || ||| | Sbjct 73772079 CTCGATGGTGTCACTGGGCTCCACCTCTAAGGTGAGGGTCTTGCCAGTCAGGGTCGTCGT 73772138 Query 42197 AAAGATTTGCATTTTCAC 42214 ||||| |||||||| || Sbjct 73772139 GAAGATCTGCATTTTGAC 73772156 >seq30 Length=120421639 Score = 95.1 bits (104), Expect = 1e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 57002 ATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCAC 57061 || |||||| || | | |||||||||| ||||||||||||||||||||| |||||||| Sbjct 21935492 ATCTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCAC 21935551 Query 57062 CACTATACTACCGAGGA 57078 |||||||||| |||||| Sbjct 21935552 CACTATACTAACGAGGA 21935568 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 21940318 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 21940377 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 21940378 ATACTAACGAGGAT 21940391 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 21911384 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 21911325 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 21911324 TACTAACGAGGA 21911313 >seq1 Length=195471971 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 171037028 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171037087 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 171037088 ATACTAACGAGGA 171037100 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 171072992 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171073051 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 171073052 ATACTAACGAGGA 171073064 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 171080606 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171080665 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 171080666 ATACTAACGAGGA 171080678 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 171102443 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 171102384 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 171102383 ATACTAACGAGGA 171102371 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 171065358 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 171065417 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 171065418 TACTAACGAGGA 171065429 >seq27 Length=130694993 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 93452978 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 93453037 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 93453038 TACTAACGAGGA 93453049 >seq33 Length=98207768 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||||| ||| | ||| |||| ||||||| ||||| |||| || ||| | | || Sbjct 16968821 CAACACCAGATGAAGGGTGGACTCCCTTTGAATGTTGTAGTCAGACAAAGTATGGCCATC 16968762 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || |||||||||||||| || | || | |||||| || | || | | ||||| || Sbjct 16968761 TTCCAGCTGCTTACCAGCAAAGACCAGCCTCTGCTGATCAGGAGGAAGTCCTTCCTTATC 16968702 Query 42116 CATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGT 42175 | ||| || || | | | | ||||| | ||| || |||| ||||||||| Sbjct 16968701 CTGGATCTTGGCCTTTACATTTTCTATGGTGTCCAGGGGTTCAACCTCGAGCGTGATGGT 16968642 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || ||| | || ||||| ||||| || ||||| Sbjct 16968641 CTTCCCCATAAGGGTCTTCACAAAAATCTGCAT 16968609 >seq185 Length=1462311 Score = 84.2 bits (92), Expect = 2e-11 Identities = 138/198 (70%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || |||||||||| ||||| || | || ||||||||||| ||||| || Sbjct 863517 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCTAGCTGCTTGCCAGCAAA 863576 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||||||| | || | || ||| || ||| ||| || || | | Sbjct 863577 GATCAGCCTCTGCTGGTCAG-GGGGATGCCCTCTTTATCCTGGATCTTGGCCTTCACGTT 863635 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || | ||||| || | |||| ||| ||||| || || ||| | Sbjct 863636 CTCGATGGTGTCACTGGGCTCCACCTCTAAGGTGAGGGTCTTGCCAGTCAGGGTCGTCGT 863695 Query 42197 AAAGATTTGCATTTTCAC 42214 ||||| |||||||| || Sbjct 863696 GAAGATCTGCATTTTGAC 863713 >seq25 Length=129401213 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 |||||||| ||| | ||| |||||||||||| ||||| |||| || |||||| | || Sbjct 111309948 CAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTCCGGCCATC 111310007 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094 || |||||||||||||| || || || | |||||| || Sbjct 111310008 TTCCAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGATC 111310046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211394436880