Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq22 196 2e-44 seq1 176 2e-38 seq31 163 1e-34 seq37 123 1e-22 seq104 122 3e-22 seq48 96.9 1e-14 seq26 96.9 1e-14 seq8 91.5 6e-13 seq7 87.8 7e-12 seq32 86.0 2e-11 >seq22 Length=149736546 Score = 196 bits (216), Expect = 2e-44 Identities = 468/698 (67%), Gaps = 15/698 (2%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| ||||||| || ||||| ||||| | ||| ||||||| Sbjct 75298044 GCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAG 75297985 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGA-ACTACTCCTTCATGGGTAAGTTTTAC 451032 || |||||||| || ||||||| ||| | || | || || || | || ||| | Sbjct 75297984 GTGGAAATTATTGCCAATGACC-AGGGTAACCACACCACGCCGAGCTATGTTGCTTTCAT 75297926 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTA--AATCAATGGT--AAATTCAAATGCCA 451088 ||| |||| ||| | | ||| | || || | ||||| ||| ||| || ||| Sbjct 75297925 GGACACAGAGAGATTAATTGGGGATGCGGCCAAGAATCA--GGTTGCAAT--GAACCCCA 75297870 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 |||||||| | |||||| |||||| | || || |||| || |||||||| | ||| | Sbjct 75297869 CCAACACAGTTTTTGATGCCAAACGTCTGATCGGGCGTAGGTTTGATGATGCTGTTGTTC 75297810 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGAT-GTAGTAAATCAAAAAGGAAAGCCCTATATT 451207 | || | || || ||| | || || || ||| | ||| | |||| | | Sbjct 75297809 AGTCTGATATGAAGCACTGGCCTT-TCATGGTGGTGAATGATGCAGGCAGGCCCAAGGTC 75297751 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 ||||| | || ||||| || || |||| ||| | || ||| | || || |||||| Sbjct 75297750 CAAGTGGAATACAAAGGAGAGACAAAAAGTTTCTACACAGAGGAAGTGTCCTCCATGGTT 75297691 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 || || || ||||| |||| |||||| || | | | ||||| |||| || Sbjct 75297690 CTGACAAAGATGAAGGAAATTGCAGAAGCGTACCTCAGAAAGACTGTTACCAATGCTGTG 75297631 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 | || || || ||||| |||||||| | || || || ||||| |||||||| ||| | Sbjct 75297630 GTCACAGTGCCGGCTTACTTCAATGACTCTCAGCGACAGGCAACAAAAGATGCTGGAACT 75297571 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 |||||||| | ||||| |||||||| || |||||||| || || |||||| | || ||| Sbjct 75297570 ATTGCTGGCCTCAATGTACTTCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTAT 75297511 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || ||| || || | || |||| ||| | | | ||||| | || || Sbjct 75297510 GGCTTAGATAA---GAAGGTCGGAGCTGAAAGGAATGTGCTCATTTTTGACTAGGGAGGT 75297454 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || ||| |||| || | || | ||||| ||||| | ||||| || || ||| Sbjct 75297453 GGCACTTTTGATGTGTCAATCCTCACTATTGAGGATGGAATTTTTGAGGTCAAATCAAGA 75297394 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || || || |||| || |||||| |||| || Sbjct 75297393 GCTGGAGACACCCACTTAGGTGGAGAAGATTTTGACAA 75297356 Score = 91.5 bits (100), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || || || ||||| || || || || |||||| | || Sbjct 122456904 ATGCAGATCTTTGTGAAGACCCTTACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 122456963 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || | | | | || || || || |||||||||||||||||||||||||| Sbjct 122456964 GACACTATAGGAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 122457023 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || || || |||||||| | |||||| | || || || Sbjct 122457024 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAAC 122457083 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 122457084 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACT 122457121 >seq1 Length=195471971 Score = 176 bits (194), Expect = 2e-38 Identities = 465/699 (67%), Gaps = 21/699 (3%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| ||||||| || ||||| ||||| | ||| ||||||| Sbjct 47657708 GCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCATCATGGAAAG 47657767 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTAC--TCCTTCATGGGTAAGTTTTA 451031 || |||||||| || |||||||| || || || || | || || ||| | Sbjct 47657768 GTGGAAATTATTGCCAATGACCAGGGTAACCGCACCACGGTGAGCCA--CGTTGCTTTCA 47657825 Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTA--AATCAATGGT--AAATTCAAATGCC 451087 | | |||| || | | ||| | || || | ||||| ||| ||| ||| || Sbjct 47657826 CAGGGACAGAGCGATTAATTGGGGATGCGGCCAAGAATCA--GGTTGCAAT--GAATCCC 47657881 Query 451088 AAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTA 451147 | |||||||| | |||||| |||||| | || || | || || |||||||| | ||| Sbjct 47657882 ACCAACACAGTTTTTGATGCCAAACGTCTGATCGGGCATAGGTTTGATGATGCTGTTGTT 47657941 Query 451148 CAAAAAGAGAAAAAATTCTTTTCTTATGAT-GTAGTAAATCAAAAAGGAAAGCCCTATAT 451206 || || | || || | | | || || || ||| | ||| | |||| | | Sbjct 47657942 CAGTCTGATATGAAGCACTGGCCCT-TCATGGTGGTGAATGATGCAGGCAGGCCCAAGGT 47658000 Query 451207 TCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 ||||| | || ||||| || || |||| ||| || || ||| | || || ||||| Sbjct 47658001 CCAAGTGGAATACAAAGG-GAGACAAAAAGTTTCTACCCAGAGGAAGTGTCCTCCATGGT 47658059 Query 451267 TCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGT 451326 ||| || || ||||| |||| |||||| || | | | ||||| |||| || Sbjct 47658060 TCTGACAAAGATGAAGGAAATTGCAGAAGCGTACCTCTGAAAGACTGTTACCAATGCTGT 47658119 Query 451327 AATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACA 451386 | || || |||||||| |||||||| | || || || ||||| |||||||| ||| Sbjct 47658120 GGTCACAGTGCCCGCTTACTTCAATGACTCTCAGCGACAGGCAACAAAAGATGCTGGAAC 47658179 Query 451387 TATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATA 451446 ||||||||| | ||||| ||||||| || |||||||| || || |||||| | || || Sbjct 47658180 TATTGCTGGCCTCAATGTACTTCGAACCATCAATGAACCAACTGCTGCTGCTATTGCTTA 47658239 Query 451447 TGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGG 451506 ||| ||| || || | || |||| || | | | ||||| || || || Sbjct 47658240 TGGCTTAG----AT--AAGGTCGGAGCTGAAAGGAACGTGCTCATTTTTGACTTGGGAGG 47658293 Query 451507 AGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAAC 451566 || ||| |||| || | || | ||||| ||||| | |||||||| || |||| Sbjct 47658294 TGGCACTTTTGATGTGTCAATCCTCACTATTGAGGATGGAATTTTTGAAGTCAAATCAAC 47658353 Query 451567 CAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || || || | || || |||||| |||| || Sbjct 47658354 AGCTGGAGACACCCACTTGGGTGGAGAAGATTTTGACAA 47658392 Score = 91.5 bits (100), Expect = 6e-13 Identities = 171/249 (69%), Gaps = 12/249 (5%) Strand=Plus/Minus Query 451892 ATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTG 451951 ||| |||| | ||| | || || |||||||| |||| || || |||||| | | || Sbjct 10555032 ATTCATGATACTGTCTTGGTGGGTGGTTCTACCAGAATCCCCAAGATTCAAAAACTTCTG 10554973 Query 451952 T----CTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGT 452007 |||||| | |||||| |||| ||||||| | || |||||||||||||| Sbjct 10554972 CAATACTTCTTCCAT----GGAAAAGAACTGAATAAGAGCATTAACCCTGATGAAGCTGT 10554917 Query 452008 TGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAG--GTTCAGATGATGAAAAATTA 452065 ||| ||| ||| || || || |||||| ||||| | | | || | ||| | | | Sbjct 10554916 TGCCTATAATGCAGCTGTGCAGGCAGCTGTTCTATCTGGAGACAAGTCTACGAATATTCA 10554857 Query 452066 GGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGA 452125 | ||| | ||| | | ||||| | ||||| || ||||| ||||||| ||| ||||| Sbjct 10554856 G--GATTTGCTGCTCTTGGATGTCAGTCCTCTTTCCCTTGGTATTGAAACTGCTAGTGGA 10554799 Query 452126 ATGATGACT 452134 | |||||| Sbjct 10554798 GTCATGACT 10554790 Score = 84.2 bits (92), Expect = 9e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| ||||||| || ||||| ||||| | ||| ||||||| Sbjct 46414517 GCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAAG 46414576 Query 450974 GTAGAAATTATAGCAAATGACCAAGG 450999 || |||||||| || |||||||| || Sbjct 46414577 GTGGAAATTATTGCCAATGACCAGGG 46414602 >seq31 Length=124902244 Score = 163 bits (180), Expect = 1e-34 Identities = 460/698 (66%), Gaps = 15/698 (2%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| ||||||| || ||||| ||||| | ||| ||||||| Sbjct 92604382 GCAGTTGGCATTGATCTTGGGACCACCTACTCCTGTGTGGGTGTCTTCCATCATGGAAAG 92604323 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || |||||||| || |||||||| || || || | || | || ||| || Sbjct 92604322 GTGGAAATTATTGCCAATGACCAGGGTAACCGCACCGCGCCGAGCTACGTTGCTTTCACC 92604263 Query 451034 GATTCAGAAAGACT--TTTAGGGCAAGCTGCTA--AATCA-ATGGTAAATTCAAATGCCA 451088 | |||| ||| | || ||| | || || | ||||| | | ||| || ||| Sbjct 92604262 GGCACAGAGAGATTAATTCAGG--ATGCGGCCAAGAATCAGGTTGCAAA---GAACCCCA 92604208 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 |||||||| | |||||| |||||| | | || |||| || |||||||| | ||| | Sbjct 92604207 CCAACACAGTTTTTGATGCCAAACGTCTGGTCGGGCGTAGGTTTGATGATGCTGTTGTTC 92604148 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGAT-GTAGTAAATCAAAAAGGAAAGCCCTATATT 451207 | || | || || | | | || || || ||| | ||| | |||| | | Sbjct 92604147 AGTCTGATATGAAGCACTGGCCCT-TCATGGTGGTGAATGATGCAGGCAGGCCCAAGGTC 92604089 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 ||||| | || ||||| || || | || ||| || || || | || || | |||| Sbjct 92604088 CAAGTGGAATACAAAGGGGAGACAACAAGTTTCTACCCAGAGAAAGTGTCCTCCACGGTT 92604029 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 || || || ||||| |||| |||||| || | || | |||| |||| || Sbjct 92604028 CTGACAAAGATGAAGGAAATTGCAGAAGCGTACCTCGGAAAGACTGTTATCAATGCTGTG 92603969 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 | || || || ||||| |||||||| | || || || ||||| |||||||| ||| | Sbjct 92603968 GTCACAGTGCCGGCTTACTTCAATGACTCTCAGCGACAGGCAACAAAAGATGCTGGAACT 92603909 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 |||||||| | ||||| |||||||| || |||||||| || || |||||| | || ||| Sbjct 92603908 ATTGCTGGCCTCAATGTACTTCGAATCATCAATGAACCAACTGCTGCTGCTATTGCTTAT 92603849 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || ||| || || | || |||| ||| | | | ||||| || || || Sbjct 92603848 GGCTTAGATAA---GAAGGTTGGAGCTGAAAGGAATGTGCTCATTTTTGACTTGGGAGGT 92603792 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || ||| |||| || | || | ||||| ||||| |||||||| || |||| Sbjct 92603791 GGCACTTTTGATGTGTCAATCCTGACTATTGAGGATGGAAGTTTTGAAGTCAAATCAACA 92603732 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| || || || |||| || ||| | |||| || Sbjct 92603731 GCTGGAGACACCCACTTAGGTGGAGAAAGTTTTGACAA 92603694 Score = 114 bits (126), Expect = 5e-20 Identities = 393/604 (65%), Gaps = 18/604 (3%) Strand=Plus/Minus Query 451896 ATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCA-AGATATGTT---G 451951 |||| ||||| | || || |||||||| |||| || || ||||| | || | | | Sbjct 92603407 ATGATATTGTCTTGGTGGGTGGTTCTACCAGAATCCCCAAGATTCAGAAATTTCTGCAAG 92603348 Query 451952 TCTTCTTATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCA 452011 |||||| | |||||| | || |||||| | || || |||||||||||||| Sbjct 92603347 ACTTCTTCAAT----GGAAAAGAGCTGAACAAGAGCATTAACCCCGATGAAGCTGTTGCC 92603292 Query 452012 TATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGA 452068 |||||||| || || || ||||| |||||| | || ||| | ||| || | Sbjct 92603291 TATGGTGCAGCTGTCCAGGCAGCCATTCTATCTGG---AGACAAGTCTGAGAACGTTCAG 92603235 Query 452069 GATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATG 452128 ||| | ||| | | ||||| || ||||| || ||||| ||||||| ||||| || | Sbjct 92603234 GATTTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTATTGAAACTGCTGGCAGAGTC 92603175 Query 452129 ATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGT 452188 |||||| | || || | || | || ||| || ||| || || || | Sbjct 92603174 ATGACTGTCCTCATCAAGTGCAATACCACCATCCCTACCAAGCAGACACAGACTTTCACC 92603115 Query 452189 ACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATG 452248 || ||| ||||| || |||||| ||||| |||| |||||| ||| | || ||| Sbjct 92603114 ACCTACTCTGACAACCAGCCTGGTGTACTCATTCAGGTGTATGAAGGTGAAAGGGCCATG 92603055 Query 452249 ACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGG 452308 || || || || || ||| | || || | ||| ||||| || | Sbjct 92603054 ACCAAGGACAACAACCTGCTTGGAAAGTTCGAGCTCACGGGCATCCCTCCAGCACCCCGT 92602995 Query 452309 GGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGT 452368 || |||||| ||||| |||| | ||| | ||||| ||||| || || ||||| | Sbjct 92602994 GGGGTTCCTCAGATTGAGGTTACTTTTGACATCGATGCCAATGGCATCCTCAATGTTTCT 92602935 Query 452369 GCAGTTG-AAAAATCATCTGGAAAATCAGAAAAA-ATTACAATTACTAATGATAAAAACC 452426 || || | || | || | || ||| ||||||| || || || || ||||| | || Sbjct 92602934 GCTGTAGTTAAGAGCA-CAGG-AAAGAAGAAAAAGATCACCATCACCAATGACAGGGGCC 92602877 Query 452427 GTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATG 452486 || ||| ||||||||||| ||||| | ||||| ||||| | ||| | ||| | Sbjct 92602876 ACTTGAGTAAGGAAGATATTGAGCGCATGGTCCAAGAAGCTGAAAAGTACAAAGCTGAGG 92602817 Query 452487 ATGA 452490 |||| Sbjct 92602816 ATGA 92602813 Score = 91.5 bits (100), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || || | || |||||||| || ||||| |||||| | || Sbjct 45858546 ATGCAGATTTTTGTGAAGACCCTTAAAGGGAAAACTATCACGCTTGAGGTTGAACCCTCG 45858487 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | || || | || |||||||||||||||||||||||| | Sbjct 45858486 GACACTATAGAAAATGTAAAGGCCAAGACCCAGGATAAGGAAGGAATTCCTCCTGATTAG 45858427 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || || || |||||||| | |||||| || || || Sbjct 45858426 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCTGTACTTTGTTTGACTACAAC 45858367 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 45858366 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACT 45858329 >seq37 Length=171031299 Score = 123 bits (136), Expect = 1e-22 Identities = 361/543 (66%), Gaps = 15/543 (3%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| ||||||| | ||||| ||| | | | ||| ||| Sbjct 17676269 GCAGTTGGCATTGATCTTGGTACCACCTACTTCTGTGTGGGTAACTTCTAGCATGAAAAG 17676210 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCAC-GAACTACTCCTTCATGGGTAAGTTTTAC 451032 || ||||| || || |||||||| || | || | || || || | || ||| || Sbjct 17676209 GTGGAAATAATTGCCAATGACCAGGG-TAACTGTACCACACCGAACTATGTTGCTTTCAC 17676151 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA--ATCAATGGTA--AATTCAAATGCCA 451088 | || | | | || ||| | || || || |||| ||| ||| | || | Sbjct 17676150 TAACACACAGCAATTATTTGGGGATGCAGCCAAGAATCA--GGTTGCAATGAACCTGACC 17676093 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 || ||||| | |||||| ||| || | ||||| ||| || |||| ||| | ||| | Sbjct 17676092 AA--CACAGGTTTTGATGCCAAATGTCTGATTGGATGTAGGTTTGATAATGCTGTTGTTC 17676035 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATG-TAGTAAATCAAAAAGGAAAGCCCTATATT 451207 | || | || || ||| | ||| | || ||| | || | ||| | | Sbjct 17676034 AGTCTGATATGAAGCACTGGCCTT-TCATGGTGGTGAATGATGCTGGCAGGCCTAAGGTC 17675976 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTT-TGCTCCTGAAGAAATTTCATCTATGGT 451266 ||||| | || ||||| || || |||| ||| | ||| || ||| | || || ||||| Sbjct 17675975 CAAGTTGAATACAAAGGGGAGACAAAAAGTTTCTACTCA-GAGGAAGTGTCCTCAATGGT 17675917 Query 451267 TCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGT 451326 ||| || | || || |||| | |||| ||| |||| | ||||| |||| || Sbjct 17675916 TCTGACACAGATAAAGGAAATTGGAGAAGCTTATCTTGGAAAAACTGTTACCAATGCTGT 17675857 Query 451327 AATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACA 451386 | || || || ||||||||||||||| | || | || ||||| |||||||| ||| Sbjct 17675856 GGTCACAGTGCCAGCTTATTTCAATGATTCTCAGGGTCAGGCAAC-AAAGATGCTGGAAC 17675798 Query 451387 TATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATA 451446 |||||||| ||||||| || ||||||| |||||||| || || |||||| | || || Sbjct 17675797 TATTGCTGACCTAAATGTATTTTGAATTATCAATGAACCAACTGCTGCTGCTATTGCTTA 17675738 Query 451447 TGG 451449 ||| Sbjct 17675737 TGG 17675735 Score = 122 bits (134), Expect = 3e-22 Identities = 197/283 (70%), Gaps = 9/283 (3%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| ||||| || || | ||||||||||||||| |||| | || || ||||| |||| Sbjct 60578381 ATGCTGTAATCACAGTCTCTGCTTATTTCAATGATTCACAGTGACAGGCCACTAAGGATG 60578322 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || || ||| ||||||| ||| || | || ||||| |||||||| ||||||| Sbjct 60578321 CTGGTCAGATATCTGAGCTAAATGTGCTTTGAGTAATCAATGAGCCTACAGCTGCTGCTC 60578262 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 |||| || || || ||| | || | ||||| ||| ||| || | ||||| Sbjct 60578261 TAGCTTAAGGTCT-GGACA--------AATCTGAAGATAAAGTCATTGCTGTGTATGATT 60578211 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | ||||| ||||| ||| | |||| || ||||| | || || ||||| || | Sbjct 60578210 TAGGTGGTGGAACCTTTGACATTTCTACCCTGGAGATTGAGAAAGGAGTGTTTGAGGTGA 60578151 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 | | |||||||| || || ||||||| ||||| |||| Sbjct 60578150 AATCTACCAATGGGGACCCTTTCTTAGGAGGGGAAGACTTTGA 60578108 Score = 87.8 bits (96), Expect = 7e-12 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 96048 ATGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGC---CAATAAACTGCATA 96104 ||||||| | |||||||||||| || || || ||||| ||| || | ||| | || Sbjct 74494450 ATGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCACATAGCAGTGAAC-GAAT- 74494507 Query 96105 AGGATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTA 96164 ||||||||| ||||| ||| |||| || || ||| | | ||| |||||| | Sbjct 74494508 -GGATAAAAGAACTTTGGAAATAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCAA 74494566 Query 96165 AACAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTT 96224 |||||| || || | ||||||||||||||||||| ||| ||||| || | Sbjct 74494567 GACAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTGTAAATGCAACCT 74494626 Query 96225 TAGGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATT 96262 |||| || || | || |||||| ||||||| |||| Sbjct 74494627 TAGGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAATT 74494664 >seq104 Length=490000 Score = 122 bits (134), Expect = 3e-22 Identities = 197/283 (70%), Gaps = 9/283 (3%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| ||||| || || | ||||||||||||||| |||| | || || ||||| |||| Sbjct 304666 ATGCTGTAATCACAGTCTCTGCTTATTTCAATGATTCACAGTGACAGGCCACTAAGGATG 304607 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || || ||| ||||||| ||| || | || ||||| |||||||| ||||||| Sbjct 304606 CTGGTCAGATATCTGAGCTAAATGTGCTTTGAGTAATCAATGAGCCTACAGCTGCTGCTC 304547 Query 451440 TAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATT 451499 |||| || || || ||| | || | ||||| ||| ||| || | ||||| Sbjct 304546 TAGCTTAAGGTCT-GGACA--------AATCTGAAGATAAAGTCATTGCTGTGTATGATT 304496 Query 451500 TTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAA 451559 | ||||| ||||| ||| | |||| || ||||| | || || ||||| || | Sbjct 304495 TAGGTGGTGGAACCTTTGACATTTCTACCCTGGAGATTGAGAAAGGAGTGTTTGAGGTGA 304436 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGA 451602 | | |||||||| || || ||||||| ||||| |||| Sbjct 304435 AATCTACCAATGGGGACCCTTTCTTAGGAGGGGAAGACTTTGA 304393 >seq48 Length=23158 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || || || ||||| || || || || |||||| | || Sbjct 14711 ATGCAGATCTTTGTGAAGACCCTTACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 14652 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | || || || || |||||||||||||||||||||||||| Sbjct 14651 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 14592 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || || || |||||||| | |||||| | || || || Sbjct 14591 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAAC 14532 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 14531 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACT 14494 >seq26 Length=124595110 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || || || ||||| || || || || |||||| | || Sbjct 83409660 ATGCAGATCTTTGTGAAGACCCTTACGGGGAAAACCATCACGCTCGAGGTTGAACCCTCG 83409719 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | || || || || |||||||||||||||||||||||||| Sbjct 83409720 GACACTATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 83409779 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || || | || || || || |||||||| | |||||| | || || || Sbjct 83409780 CAGAGGCTGATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGGACTTTGTCTGACTACAAC 83409839 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 83409840 ATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACT 83409877 >seq8 Length=160039680 Score = 91.5 bits (100), Expect = 6e-13 Identities = 169/246 (69%), Gaps = 4/246 (2%) Strand=Plus/Plus Query 96048 ATGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA-- 96105 ||||||| | |||||||||||| || || || ||||| ||| || | || | || Sbjct 116528206 ATGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATATCAGTGAACAAAT 116528263 Query 96106 GGATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAA 96165 ||||||||| ||||| ||| |||| || || ||| | | ||| |||||| | Sbjct 116528264 GGATAAAAGAACTTTGGAAATAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCAAG 116528323 Query 96166 ACAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTT 96225 |||||| || || | || |||||||||||||||| ||| ||||| || || Sbjct 116528324 ACAAATGCTGCCATTACTGTTACTATTTGGATGATAAATTCTTGTTGTAAATGCAACCTT 116528383 Query 96226 AGGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTC 96285 ||| || || | || |||||| ||||||| |||| || |||||| ||||| | Sbjct 116528384 AGGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAATTGTCAAAAAGAATACACCACCTTG 116528443 Query 96286 ATAGGG 96291 ||| || Sbjct 116528444 ATATGG 116528449 >seq7 Length=182113224 Score = 87.8 bits (96), Expect = 7e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 ||||| ||||||| ||||||| || ||||| ||||||||||| || || |||||||| Sbjct 34773821 GTTACCCATGCAGTTGTTACTGTACCAGCTTACTTCAATGATGCCCAGCGACAAGCAACC 34773880 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| || ||||||||| | ||||| | | || || ||||| || Sbjct 34773881 AAAGATGCTGGCACTATTGCTGGACTGAATGTCATGAGGATCATCAATGAGCC 34773933 Score = 84.2 bits (92), Expect = 9e-11 Identities = 151/221 (68%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | ||||| || || || || || || ||||| || || || || |||||| | Sbjct 145510659 ATGATGCAGATTTTTGTGAAGACCCTTACGGGGAAAACCATCACGCTCGAGGTTGAACCC 145510600 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 | || | || ||| | | || || | || |||||||||||||||||||||||| Sbjct 145510599 TGGGACACTATAGAAAATGTAAAGGTCAAGACCCAGGATAAGGAAGGAATTCCTCCTGAT 145510540 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || || | | || || | || || | | |||||||| | |||||| | || || Sbjct 145510539 CAGCAGAGGCTGATCTTTGCTGGTAAGCCTCCGGAAGATGGCCGGACTTTGTCTGACTAC 145510480 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || ||| | ||||| | || ||||| | || || ||||| Sbjct 145510479 AACATTCAAAAGGAGTCCACCCTTCATCTGGTGTTGAGACT 145510439 >seq32 Length=104043685 Score = 86.0 bits (94), Expect = 2e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 127419 ATATGCTTCCGAAATTTCTTTAAATTTTTGTTCAGCTTCTTGTTTGTTATTTTGATTCTT 127478 |||||| || | | |||||| |||||| | || ||||| | ||| || | | |||| || Sbjct 81407976 ATATGCCTCGGCGACTTCTTTGAATTTTCGCTCCGCTTCCTCTTTATTTTCTGGATTTTT 81408035 Query 127479 ATCAGGATGATGTTTAACAGCTAATTTACGGTAAGCTTTTTTAATTTCTGCT 127530 ||||||||| ||||| |||| |||||| |||||| ||||||| ||| || Sbjct 81408036 ATCAGGATGCCATTTAAGTGCTACTTTACGATAAGCTCTTTTAATGTCTTCT 81408087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975713160024356