Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq192 107 2e-18 seq186 107 2e-18 seq34 107 2e-18 seq123 102 1e-16 >seq192 Length=4910976 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 14169 CCGGGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACG 14228 || ||||| |||||||| || || | |||||||||||| |||||||||| |||| || Sbjct 2845513 CCAGGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAAAAGGAACC 2845572 Query 14229 ACGATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCT 14288 || | |||| |||| || || || || ||||| || || || | || ||| | |||| Sbjct 2845573 ACCACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCC 2845632 Query 14289 GTATCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAA 14348 | || || | || | || || |||| | ||| || | | || ||||| || || Sbjct 2845633 ATGTCCTGGGTGTGGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAG 2845692 Query 14349 AAACCCAAAGCCCAGCACC 14367 ||||||| ||||||||||| Sbjct 2845693 AAACCCAGAGCCCAGCACC 2845711 Score = 102 bits (112), Expect = 1e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 14169 CCGGGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACG 14228 || ||||| |||||||| | || | |||||||||||| ||||||||||| ||| || Sbjct 3174404 CCAGGTAACCCTTCATGGTTGACATGACATGTGTATCTCAGCTCTTCTCCAGGAGGAACC 3174345 Query 14229 ACGATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCT 14288 || | |||| |||| || || || || ||||| || || || | || ||| | |||| Sbjct 3174344 ACCACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCC 3174285 Query 14289 GTATCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAA 14348 | || || | || | || ||| || | | ||| || || | || ||||| || || Sbjct 3174284 ATGTCCTGGGTGTGGTTTTTTCCATCCCTCTTCCAGGTCATGGTGATGTCAGCTGGGTAG 3174225 Query 14349 AAACCCAAAGCCCAGCACC 14367 ||||||| |||||||||| Sbjct 3174224 AAACCCAGGGCCCAGCACC 3174206 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| |||||||||||| || || || Sbjct 2648516 GGTAACCCTTCATGGTGCACATGACATGTGTATCTTAGCTCTTCTCCAGAGGGAACCACC 2648575 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 2648576 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 2648635 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | | | || || |||| | ||| || | | || ||||| || || || Sbjct 2648636 TCCTGGGTGTAGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAGAAG 2648695 Query 14352 CCCAAAGCCCAGCACC 14367 ||||| |||||||||| Sbjct 2648696 CCCAAGGCCCAGCACC 2648711 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||| ||| || || | |||||||||||| ||||||||||||||| || || Sbjct 3135772 GGTAACCCTTTATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACC 3135713 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 3135712 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 3135653 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | || | | || || | | ||| || || |||| ||||| || || || Sbjct 3135652 TCCTGGGTGTGGTTGTTCCCATCCCTCTTCCAAGTCATGGTTATGTCAGCTGGGTAGAAG 3135593 Query 14352 CCCAAAGCCCAGCACC 14367 |||| |||||||||| Sbjct 3135592 CCCAGGGCCCAGCACC 3135577 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| |||||||||||| || || || Sbjct 2613735 GGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAGGGAACCACC 2613794 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 2613795 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 2613854 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | | | || || |||| | ||| || | | || ||||| || || || Sbjct 2613855 TCCTGGGTGTAGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAGAAG 2613914 Query 14352 CCCAAAGCCCAGCACC 14367 |||| |||||||||| Sbjct 2613915 CCCAGGGCCCAGCACC 2613930 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| ||||||||||||||| || || Sbjct 2742767 GGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACC 2742826 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTC 14287 | |||| |||| || || || || ||||| || || || | |||||| | |||| Sbjct 2742827 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTATCTGGCAGCTC 2742882 Score = 86.0 bits (94), Expect = 8e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 14175 AAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATA 14234 ||| ||||||| || || | |||||||||||| ||||||||||||||| || || | | Sbjct 3104378 AAGGCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACCACA 3104319 Query 14235 GCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCT 14294 ||| |||| || || || || ||||| || || || | | ||| | |||| | || Sbjct 3104318 GCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGGGTCTGGCAGCTCCATGTCC 3104259 Query 14295 TGACT-TTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACC 14353 || | | ||| || || || | | ||| || || | || ||||| | || || || Sbjct 3104258 TGGGTGTGGATGATC-CCATCCCTCTTCCAAGTCATGGTGATGTCAGCTAGGTAGAAGCC 3104200 Query 14354 CAAAGCCCAGCACC 14367 ||| |||||||||| Sbjct 3104199 CAAGGCCCAGCACC 3104186 >seq186 Length=4256209 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 14169 CCGGGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACG 14228 || ||||| |||||||| || || | |||||||||||| |||||||||| |||| || Sbjct 2769885 CCAGGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAAAAGGAACC 2769944 Query 14229 ACGATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCT 14288 || | |||| |||| || || || || ||||| || || || | || ||| | |||| Sbjct 2769945 ACCACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCC 2770004 Query 14289 GTATCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAA 14348 | || || | || | || || |||| | ||| || | | || ||||| || || Sbjct 2770005 ATGTCCTGGGTGTGGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAG 2770064 Query 14349 AAACCCAAAGCCCAGCACC 14367 ||||||| ||||||||||| Sbjct 2770065 AAACCCAGAGCCCAGCACC 2770083 Score = 102 bits (112), Expect = 1e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 14169 CCGGGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACG 14228 || ||||| |||||||| | || | |||||||||||| ||||||||||| ||| || Sbjct 3098773 CCAGGTAACCCTTCATGGTTGACATGACATGTGTATCTCAGCTCTTCTCCAGGAGGAACC 3098714 Query 14229 ACGATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCT 14288 || | |||| |||| || || || || ||||| || || || | || ||| | |||| Sbjct 3098713 ACCACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCC 3098654 Query 14289 GTATCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAA 14348 | || || | || | || ||| || | | ||| || || | || ||||| || || Sbjct 3098653 ATGTCCTGGGTGTGGTTTTTTCCATCCCTCTTCCAGGTCATGGTGATGTCAGCTGGGTAG 3098594 Query 14349 AAACCCAAAGCCCAGCACC 14367 ||||||| |||||||||| Sbjct 3098593 AAACCCAGGGCCCAGCACC 3098575 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| |||||||||||| || || || Sbjct 2624883 GGTAACCCTTCATGGTGCACATGACATGTGTATCTTAGCTCTTCTCCAGAGGGAACCACC 2624942 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 2624943 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 2625002 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | | | || || |||| | ||| || | | || ||||| || || || Sbjct 2625003 TCCTGGGTGTAGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAGAAG 2625062 Query 14352 CCCAAAGCCCAGCACC 14367 ||||| |||||||||| Sbjct 2625063 CCCAAGGCCCAGCACC 2625078 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||| ||| || || | |||||||||||| ||||||||||||||| || || Sbjct 3060145 GGTAACCCTTTATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACC 3060086 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 3060085 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 3060026 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | || | | || || | | ||| || || |||| ||||| || || || Sbjct 3060025 TCCTGGGTGTGGTTGTTCCCATCCCTCTTCCAAGTCATGGTTATGTCAGCTGGGTAGAAG 3059966 Query 14352 CCCAAAGCCCAGCACC 14367 |||| |||||||||| Sbjct 3059965 CCCAGGGCCCAGCACC 3059950 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| |||||||||||| || || || Sbjct 2590102 GGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAGGGAACCACC 2590161 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 2590162 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 2590221 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | | | || || |||| | ||| || | | || ||||| || || || Sbjct 2590222 TCCTGGGTGTAGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAGAAG 2590281 Query 14352 CCCAAAGCCCAGCACC 14367 |||| |||||||||| Sbjct 2590282 CCCAGGGCCCAGCACC 2590297 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| ||||||||||||||| || || Sbjct 2667138 GGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACC 2667197 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTC 14287 | |||| |||| || || || || ||||| || || || | |||||| | |||| Sbjct 2667198 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTATCTGGCAGCTC 2667253 Score = 86.0 bits (94), Expect = 8e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 14175 AAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATA 14234 ||| ||||||| || || | |||||||||||| ||||||||||||||| || || | | Sbjct 3028749 AAGGCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACCACA 3028690 Query 14235 GCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCT 14294 ||| |||| || || || || ||||| || || || | | ||| | |||| | || Sbjct 3028689 GCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGGGTCTGGCAGCTCCATGTCC 3028630 Query 14295 TGACT-TTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACC 14353 || | | ||| || || || | | ||| || || | || ||||| | || || || Sbjct 3028629 TGGGTGTGGATGATC-CCATCCCTCTTCCAAGTCATGGTGATGTCAGCTAGGTAGAAGCC 3028571 Query 14354 CAAAGCCCAGCACC 14367 ||| |||||||||| Sbjct 3028570 CAAGGCCCAGCACC 3028557 >seq34 Length=94987271 Score = 107 bits (118), Expect = 2e-18 Identities = 143/199 (72%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 14169 CCGGGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACG 14228 || ||||| |||||||| || || | |||||||||||| |||||||||| |||| || Sbjct 36460410 CCAGGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAAAAGGAACC 36460469 Query 14229 ACGATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCT 14288 || | |||| |||| || || || || ||||| || || || | || ||| | |||| Sbjct 36460470 ACCACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCC 36460529 Query 14289 GTATCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAA 14348 | || || | || | || || |||| | ||| || | | || ||||| || || Sbjct 36460530 ATGTCCTGGGTGTGGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAG 36460589 Query 14349 AAACCCAAAGCCCAGCACC 14367 ||||||| ||||||||||| Sbjct 36460590 AAACCCAGAGCCCAGCACC 36460608 Score = 102 bits (112), Expect = 1e-16 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||| ||| || || | |||||||||||| ||||||||||||||| || || Sbjct 36774819 GGTAACCCTTTATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACC 36774760 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 36774759 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 36774700 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 ||||| | || | | || || | | ||| || || |||| ||||| || || || Sbjct 36774699 TCTTGGGTGTGGTTGTTCCCATCCCTCTTCCAAGTCATGGTTATGTCAGCTGGGTAGAAG 36774640 Query 14352 CCCAAAGCCCAGCACC 14367 |||| |||||||||| Sbjct 36774639 CCCAGGGCCCAGCACC 36774624 Score = 102 bits (112), Expect = 1e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 14169 CCGGGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACG 14228 || ||||| |||||||| | || | |||||||||||| ||||||||||| ||| || Sbjct 36814064 CCAGGTAACCCTTCATGGTTGACATGACATGTGTATCTCAGCTCTTCTCCAGGAGGAACC 36814005 Query 14229 ACGATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCT 14288 || | |||| |||| || || || || ||||| || || || | || ||| | |||| Sbjct 36814004 ACCACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCC 36813945 Query 14289 GTATCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAA 14348 | || || | || | || ||| || | | ||| || || | || ||||| || || Sbjct 36813944 ATGTCCTGGGTGTGGTTTTTTCCATCCCTCTTCCAGGTCATGGTGATGTCAGCTGGGTAG 36813885 Query 14349 AAACCCAAAGCCCAGCACC 14367 ||||||| |||||||||| Sbjct 36813884 AAACCCAGGGCCCAGCACC 36813866 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| |||||||||||| || || || Sbjct 36284531 GGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAGGGAACCACC 36284590 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 36284591 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 36284650 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | | | || || |||| | ||| || | | || ||||| || || || Sbjct 36284651 TCCTGGGTGTAGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAGAAG 36284710 Query 14352 CCCAAAGCCCAGCACC 14367 |||| |||||||||| Sbjct 36284711 CCCAGGGCCCAGCACC 36284726 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| |||||||||||| || || || Sbjct 36324266 GGTAACCCTTCATGGTGCACATGACATGTGTATCTTAGCTCTTCTCCAGAGGGAACCACC 36324325 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 36324326 ACAGCTGCCCACTTCTGGAAAGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 36324385 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | | | | || || | | ||| || || | || ||||| || || || Sbjct 36324386 TCCTGGGTGAGGTTGTTCCCATCCCTCTTCCAGGTCATGGTGATGTCAGCTGGGTAGAAG 36324445 Query 14352 CCCAAAGCCCAGCACC 14367 ||||| |||||||||| Sbjct 36324446 CCCAAGGCCCAGCACC 36324461 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| ||||||||||||||| || || Sbjct 36366516 GGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACC 36366575 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTC 14287 | |||| |||| || || || || ||||| || || || | |||||| | |||| Sbjct 36366576 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTATCTGGCAGCTC 36366631 Score = 87.8 bits (96), Expect = 2e-12 Identities = 135/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 14175 AAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATA 14234 ||| ||||||| || || | |||||||||||| ||||||||||||||| || || | | Sbjct 36734513 AAGGCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACCACA 36734454 Query 14235 GCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCT 14294 ||| ||| || || || || ||||| || || || | | ||| | |||| | ||| Sbjct 36734453 GCTGCCCCCTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGGGTCTGGCAGCTCCATGTCT 36734394 Query 14295 TGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACCC 14354 || | || | | || || | | ||| || || | |||||||| | || || ||| Sbjct 36734393 TGGGTGTGGTTGTTCCCATCCCTCTTCCAAGTCATGGTGATATCAGCTAGGTAGAAGCCC 36734334 Query 14355 AAAGCCCAGCACC 14367 | |||||||||| Sbjct 36734333 AGGGCCCAGCACC 36734321 Score = 84.2 bits (92), Expect = 3e-11 Identities = 133/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 14181 TCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATAGCTACC 14240 |||||||| || | |||||||||||| ||| ||||||||||| || || | |||| || Sbjct 36014832 TCATGTTGCACATGACATGTGTATCTCTGCTCCTCTCCAGAAGGCACCACCACAGCTGCC 36014891 Query 14241 CATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCTTGACTT 14300 || || || || |||||||| || | || | || || | |||| || || || | Sbjct 36014892 CACTTCTGGAATGTCCCATCCCCTGAAGGCCTCGTCTCCACAAGCTCCGTGTCCTGGGTC 36014951 Query 14301 TGATCTTCTCCGTCTCGA-TACCACGTAATTTTTATATCAGCCGGATAAAAACCCAAAGC 14359 | || ||||| | || | | ||| || | | || ||||| || || || |||| || Sbjct 36014952 AGCTCCTCTCCAT-TCAACTGCCAGGTCAGGGTGATGTCAGCAGGGTAGAAGCCCAGGGC 36015010 Query 14360 CCAGCACC 14367 |||||||| Sbjct 36015011 CCAGCACC 36015018 >seq123 Length=1154078 Score = 102 bits (112), Expect = 1e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 14169 CCGGGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACG 14228 || ||||| |||||||| || || | |||||||||||| |||||||||| |||| || Sbjct 440724 CCAGGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAAAAGGAACC 440783 Query 14229 ACGATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCT 14288 || | ||| |||| || || || || ||||| || || || | || ||| | |||| Sbjct 440784 ACCACTGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCC 440843 Query 14289 GTATCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAA 14348 | || || | || | || || |||| | ||| || | | || ||||| || || Sbjct 440844 ATGTCCTGGGTGTGGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAG 440903 Query 14349 AAACCCAAAGCCCAGCACC 14367 ||||||| ||||||||||| Sbjct 440904 AAACCCAGAGCCCAGCACC 440922 Score = 102 bits (112), Expect = 1e-16 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 14169 CCGGGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACG 14228 || ||||| |||||||| | || | |||||||||||| ||||||||||| ||| || Sbjct 768716 CCAGGTAACCCTTCATGGTTGACATGACATGTGTATCTCAGCTCTTCTCCAGGAGGAACC 768657 Query 14229 ACGATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCT 14288 || | |||| |||| || || || || ||||| || || || | || ||| | |||| Sbjct 768656 ACCACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCC 768597 Query 14289 GTATCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAA 14348 | || || | || | || ||| || | | ||| || || | || ||||| || || Sbjct 768596 ATGTCCTGGGTGTGGTTTTTTCCATCCCTCTTCCAGGTCATGGTGATGTCAGCTGGGTAG 768537 Query 14349 AAACCCAAAGCCCAGCACC 14367 ||||||| |||||||||| Sbjct 768536 AAACCCAGGGCCCAGCACC 768518 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| |||||||||||| || || || Sbjct 297864 GGTAACCCTTCATGGTGCACATGACATGTGTATCTTAGCTCTTCTCCAGAGGGAACCACC 297923 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 297924 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 297983 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | | | || || |||| | ||| || | | || ||||| || || || Sbjct 297984 TCCTGGGTGTAGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAGAAG 298043 Query 14352 CCCAAAGCCCAGCACC 14367 ||||| |||||||||| Sbjct 298044 CCCAAGGCCCAGCACC 298059 Score = 96.9 bits (106), Expect = 4e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||| ||| || || | |||||||||||| ||||||||||||||| || || Sbjct 729243 GGTAACCCTTTATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACC 729184 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 729183 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 729124 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | || | | || || | | ||| || || |||| ||||| || || || Sbjct 729123 TCCTGGGTGTGGTTGTTCCCATCCCTCTTCCAGGTCATGGTTATGTCAGCTGGGTAGAAG 729064 Query 14352 CCCAAAGCCCAGCACC 14367 |||| |||||||||| Sbjct 729063 CCCAGGGCCCAGCACC 729048 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| |||||||||||| || || || Sbjct 258397 GGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAGGGAACCACC 258456 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTA 14291 | |||| |||| || || || || ||||| || || || | || ||| | |||| | Sbjct 258457 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTGTCTGGCAGCTCCATG 258516 Query 14292 TCTTGACTTTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAA 14351 || || | | | || || |||| | ||| || | | || ||||| || || || Sbjct 258517 TCCTGGGTGTAGTTTTTCCCATCTCTCTTCCAGGTCAGGGTGATGTCAGCTGGGTAGAAG 258576 Query 14352 CCCAAAGCCCAGCACC 14367 |||| |||||||||| Sbjct 258577 CCCAGGGCCCAGCACC 258592 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 14172 GGTAAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACG 14231 ||||| |||||||| || || | |||||||||||| ||||||||||||||| || || Sbjct 340080 GGTAACCCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACC 340139 Query 14232 ATAGCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTC 14287 | |||| |||| || || || || ||||| || || || | |||||| | |||| Sbjct 340140 ACAGCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGTATCTGGCAGCTC 340195 Score = 86.0 bits (94), Expect = 8e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 14175 AAGCCTTCATGTTGAACGTCACATGTGTATCTAGTCTCTTCTCCAGAAGGGACGACGATA 14234 ||| ||||||| || || | |||||||||||| ||||||||||||||| || || | | Sbjct 697848 AAGGCTTCATGGTGCACATGACATGTGTATCTCAGCTCTTCTCCAGAAGGAACCACCACA 697789 Query 14235 GCTACCCATTTTTGAAACGTCCCATCTCCAGCTGGACGTGTATCTATCTGCTCTGTATCT 14294 ||| |||| || || || || ||||| || || || | | ||| | |||| | || Sbjct 697788 GCTGCCCACTTCTGGAAGGTTCCATCCCCTGCAGGCCTGGGGTCTGGCAGCTCCATGTCC 697729 Query 14295 TGACT-TTGATCTTCTCCGTCTCGATACCACGTAATTTTTATATCAGCCGGATAAAAACC 14353 || | | ||| || || || | | ||| || || | || ||||| | || || || Sbjct 697728 TGGGTGTGGATGATC-CCATCCCTCTTCCAAGTCATGGTGATGTCAGCTAGGTAGAAGCC 697670 Query 14354 CAAAGCCCAGCACC 14367 ||| |||||||||| Sbjct 697669 CAAGGCCCAGCACC 697656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629281571729720