Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq23 100 3e-16 >seq23 Length=145441459 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||||||||| || || ||||| ||||| ||||| ||| | |||||| |||||| Sbjct 102459456 TCCCAGACGGAGACCGGTACCCCATACATGCTCTACAAAGATTCCTGTAACCGGAAGAGC 102459515 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 ||||| |||| ||||||| ||||| || || || || || ||||| |||||||| Sbjct 102459516 AACCAGCAGAACCTGGGAACCATCAAATGCAGCAACCTGTGTACAGAAATAGTAGAGTAC 102459575 Query 76016 ACAGATAAGGATGAG 76030 || ||| |||||| Sbjct 102459576 ACCAGTAAAGATGAG 102459590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568056376160