Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_025963.1 Length=139981 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 5e-13 >seq1 Length=195471971 Score = 89.7 bits (98), Expect = 5e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 133097 GGATATTTGGGGTGCCAAGCACTCTCGGAGATGATCCAGTTCTACCTGGAAGAAGTCATG 133156 || || ||||| |||||||| | ||||| ||||||||||| ||||||| |||||| ||| Sbjct 131021329 GGTTACTTGGGTTGCCAAGCCTTATCGGAAATGATCCAGTTTTACCTGGTAGAAGTGATG 131021388 Query 133157 CCGCAGGCAGAGAATCACGGACCA 133180 || ||||||||||| || || ||| Sbjct 131021389 CCCCAGGCAGAGAAGCATGGCCCA 131021412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447810041288520