Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq28 134 3e-26 seq9 129 1e-24 seq37 125 2e-23 seq31 125 2e-23 seq185 123 6e-23 seq35 123 6e-23 seq26 123 6e-23 seq36 116 9e-21 seq207 107 5e-18 seq7 98.7 2e-15 seq16 84.2 5e-11 >seq28 Length=122082543 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||||| | | ||| | |||||| Sbjct 62553041 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 62552982 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| || || ||||| || | || ||||| || || || || || || || Sbjct 62552981 TCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 62552922 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| || ||||| || || ||||| ||| Sbjct 62552921 TGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTC 62552862 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | ||||| Sbjct 62552861 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 62552830 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || | | ||||| |||| |||||||| | | ||| | |||||| Sbjct 73771940 AGGACCAGGTGCAGGGCTCACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 73771999 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| ||||| ||||| || | || ||||| || || || || || || || Sbjct 73772000 TCTAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGG-GGGATGCCCTCTTTATCC 73772058 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| ||||| |||| ||| Sbjct 73772059 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCTAAGGTGAGGGTC 73772118 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| || | |||| | |||||||| Sbjct 73772119 TTGCCAGTCAGGGTCGTCGTGAAGATCTGCATTTT 73772153 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| |||||||| | | || | |||||| Sbjct 62552357 AGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCT 62552298 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || ||||| || || || || || || || Sbjct 62552297 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 62552238 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| |||| ||||| ||| Sbjct 62552237 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTC 62552178 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| || || | ||| | |||||||| Sbjct 62552177 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 62552143 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||||| | | || | |||||| Sbjct 62552585 AGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCT 62552526 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || ||||| || || || || || || || Sbjct 62552525 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 62552466 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| || | ||||| ||| Sbjct 62552465 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 62552406 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | ||||| Sbjct 62552405 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 62552374 Score = 116 bits (128), Expect = 9e-21 Identities = 160/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| | ||||| ||||| |||| |||||||| | || || Sbjct 96795605 CGCAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAATCAGACAGGGTG 96795664 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 ||||| |||||||| || || ||||| || || | || ||||| || || | || Sbjct 96795665 TGGCCATCCTCTAGCTGTTTGCCGGCGAATATCAGCCTCTGCTGGTCAGGTGGGAGGCCC 96795724 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| ||| ||||||||||| || || || || | Sbjct 96795725 TCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCTACCTCAAGA 96795784 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||||||| ||| || || | ||| | ||||| || Sbjct 96795785 GTGATGGTCTTGCCCATCAGGGTCTTCACGAAGATCTGCATGTT 96795828 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| |||||||| | | || | |||||| Sbjct 62552813 AGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCT 62552754 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || ||||| || || || || || || || Sbjct 62552753 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 62552694 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| || | ||||| ||| Sbjct 62552693 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 62552634 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | ||||| Sbjct 62552633 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 62552602 >seq9 Length=156508116 Score = 129 bits (142), Expect = 1e-24 Identities = 163/224 (73%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| | ||||| ||||| |||| ||||| |||| || || Sbjct 3973340 CGCAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTG 3973399 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || ||||| || || ||||| || || | || ||||| || || || ||| Sbjct 3973400 CGGCCATCCTCCAGCTGTTTGCCCGCGAATATCAGCCTCTGCTGGTCAGGTGGGATGCCT 3973459 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| ||| ||||||||||| || || || || | Sbjct 3973460 TCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGA 3973519 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||||||||||| || || | ||| | ||||| || Sbjct 3973520 GTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGTT 3973563 >seq37 Length=171031299 Score = 125 bits (138), Expect = 2e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| | ||||| ||||| |||| ||||| |||| || || Sbjct 162567077 CGCAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTG 162567018 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || ||||| || || ||||| || || | || ||||| || || || ||| Sbjct 162567017 CGGCCATCCTCCAGCTGTTTGCCCGCGAATATCAGCCTCTGCTGGTCAGGTGGGATGCCT 162566958 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| ||| ||||||||||| || || || || | Sbjct 162566957 TCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGA 162566898 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||||| || || || | ||| | ||||| || Sbjct 162566897 GTGATGGTCTTGCCCGGCAGGGTCTTCACGAAGATCTGCATGTT 162566854 Score = 93.3 bits (102), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||||| | | ||| |||||| Sbjct 79904671 AGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGAGAGTATGGCCATCT 79904612 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGA-ATACCTTCCTTGTC 225620 ||||| |||| || ||||| || | || ||||| || ||| || || || || || Sbjct 79904611 TCTAGTTGCTCGTTGGCAAAGATCAGCCTCTGCTGGTCAGGGGGAGATGCCCTCTTTATC 79904552 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 |||||||| ||||| | | ||||||||| || ||||| |||| ||||| || Sbjct 79904551 CTGGATCTTGGCCTTCATATTCTTGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGT 79904492 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||| | ||| || || | ||| | |||||||| Sbjct 79904491 CTTACTGTTCATGGTCTTCACGAAGATCTGCATTTT 79904456 >seq31 Length=124902244 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||||| | | ||| | |||||| Sbjct 46084793 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 46084734 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| || || ||||| || | || ||||| || || || || || || || Sbjct 46084733 TCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 46084674 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| || | ||||| ||| Sbjct 46084673 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 46084614 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | ||||| Sbjct 46084613 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 46084582 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| |||||||| | | || | |||||| Sbjct 46084337 AGGACCAGGTGCAGGGTTGACTCCTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCT 46084278 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || ||||| || || || || || || || Sbjct 46084277 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 46084218 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| |||| ||||| ||| Sbjct 46084217 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCTAGGGTGATGGTC 46084158 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| || || | ||| | |||||||| Sbjct 46084157 TTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 46084123 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||||| | | || | |||||| Sbjct 46084565 AGGACCAGGTGCAGGGTTGACTCTTTCTGGATGTTGTAATCAGAGAGGGTGCGGCCATCT 46084506 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || | || ||||| || || || || || || || Sbjct 46084505 TCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCC 46084446 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| || | ||||| ||| Sbjct 46084445 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 46084386 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| || || | ||| | ||||| Sbjct 46084385 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 46084354 >seq185 Length=1462311 Score = 123 bits (136), Expect = 6e-23 Identities = 157/215 (73%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || | | ||||| |||| |||||||| | | ||| | |||||| Sbjct 863497 AGGACCAGGTGCAGGGCTCACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 863556 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 ||||||||||| ||||| ||||| || | || ||||| || || || || || || || Sbjct 863557 TCTAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGG-GGGATGCCCTCTTTATCC 863615 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| ||||| |||| ||| Sbjct 863616 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCTAAGGTGAGGGTC 863675 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| || | |||| | |||||||| Sbjct 863676 TTGCCAGTCAGGGTCGTCGTGAAGATCTGCATTTT 863710 >seq35 Length=90702639 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || ||||| | ||||| ||||| |||| ||||| |||| || || | ||||| Sbjct 35536795 CAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 35536736 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || ||||| || || | ||| || || | || ||||| || || || ||||||||||| Sbjct 35536735 CTCCAGCTGTTTGCCCGTGAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTC 35536676 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| ||| ||| ||||||||||| || | || || | ||||| || Sbjct 35536675 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTTGACCTCAAGAGTGATGGT 35536616 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||||||||| || || ||||| | ||||| || Sbjct 35536615 CTTGCCCGTCAGGGTCTTCATGAAGATCTGCATGTT 35536580 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 |||| || || ||||| || || ||||||||||| || || ||||| || |||||||| Sbjct 77780308 AATACCTGTCCGTCAGTGATGGAAATAACATTTGTTGGAATGTAAGCGGACACATCACCA 77780249 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAA 4577 || |||||||| | || |||||||| || | || ||||||||||| Sbjct 77780248 GCCTGTGTTTCAATGACTGGTAAGGCAGTCAAAGAGCCACCACCAAA 77780202 >seq26 Length=124595110 Score = 123 bits (136), Expect = 6e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 ||| || ||||| | ||||| ||||| |||| ||||| |||| || || ||||| Sbjct 19928070 CAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGAGGCCATC 19928129 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 || ||||| || || ||||| || || | || ||||| || || || ||||||||||| Sbjct 19928130 CTCCAGCTGTTTGCCCGCGAATATCAGCCTCTGCTGGTCAGGTGGGATGCCTTCCTTGTC 19928189 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| ||| ||| ||||||||||| || || || || | ||||| || Sbjct 19928190 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACCTCAAGAGTGATGGT 19928249 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||||||||| || || | ||| | ||||| || Sbjct 19928250 CTTGCCCGTCAGGGTCTTCACGAAGATCTGCATGTT 19928285 Score = 122 bits (134), Expect = 2e-22 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || | ||| || ||||| | ||||| ||||| |||| ||||| |||| || || Sbjct 72174739 CGCAGACGCAGCACCAGGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTG 72174798 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || ||||| || || ||||| || || | || ||||| || || || ||| Sbjct 72174799 CGGCCATCCTCCAGCTGTTTGCCCGCGAATATCAGCCTCTGCTGGTCAGGTGGGATGCCT 72174858 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| ||| | ||||||||| || || || || | Sbjct 72174859 TCCTTGTCTTGGATCTTGGCCTTGACATTCTTGATGGTGTCACTGGGCTCGACCTCAAGA 72174918 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCA 225712 ||||| ||||||||||||| || || | ||| | |||| Sbjct 72174919 GTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCA 72174958 >seq36 Length=61431566 Score = 116 bits (128), Expect = 9e-21 Identities = 144/196 (73%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| || || || || ||||| || ||||| | ||||| || | |||||| Sbjct 16716013 ACGAAGTCTCAACACCAGATGAAGGGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 16715954 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||| ||| ||||| |||| || | || || | || ||||| | Sbjct 16715953 CCGGCCATCTTCCAGCT-CTTACCAGCAAAGACCAGCCTCTGCTGATGAGGAGGAATTTC 16715895 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||| ||| |||| ||| ||| ||| || ||||| |||| ||| || || | Sbjct 16715894 TTCCTTGTCCTGGGTCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAG 16715835 Query 225672 CGTGATCGTCTTGCCC 225687 |||||| || || ||| Sbjct 16715834 CGTGATGGTTTTCCCC 16715819 >seq207 Length=16299 Score = 107 bits (118), Expect = 5e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| ||||||| ||||| | || || ||||| |||||||| |||||||| | || || Sbjct 5480 CCAAATTTACAATGTTATCGTAACTGCCCATGCTTTTGTTATAATTTTCTTCATAGTAAT 5539 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 || | || || || || || ||||| ||| | || || |||| || || || || || Sbjct 5540 ACCAATAATAATTGGAGGCTTTGGAAACTGACTTGTCCCACTAATAATCGGAGCCCCAGA 5599 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 ||| || || ||| | | || ||||||||||||||| | ||||| || || || Sbjct 5600 TATAGCATTCCCACGAATAAATAATATAAGTTTTTGACTCCTACCACCATCATT 5653 >seq7 Length=182113224 Score = 98.7 bits (108), Expect = 2e-15 Identities = 126/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| ||||||| ||||| | || || |||| |||||||| |||||||| | || || Sbjct 22589495 CCAAATTTACAATGTTATCGTAACTGCCCATGTTTTTGTTATAATTTTCTTCATAGTAAT 22589436 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 || | || || || || || ||||| ||| | || || |||| || || || || || Sbjct 22589435 ACCAATAATAATCGGAGGCTTTGGAAACTGACTTGTCCCACTAATAATCGGAGCCCCAGA 22589376 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 ||| || || ||| | | || ||||||||||||||| | |||| || || || Sbjct 22589375 TATAGCATTCCCACGAATAAATAATATAAGTTTTTGACTCTTACCACCATCATT 22589322 Score = 96.9 bits (106), Expect = 8e-15 Identities = 124/171 (73%), Gaps = 4/171 (2%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || || || || || ||||| | ||||| | |||||| Sbjct 92561444 ACGAAGTCTCAACACAAGATGAAGGGTAGACTCCTTTTGAATGTTGTA----GTCAAAGT 92561389 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 |||||||| |||||||| ||||| |||| | | || || || || ||||| || Sbjct 92561388 ATGGCCATCTTCCAGCTGCTTGCCAGCACAGATCAACCTCTGCTGATCAGGAGGAATTCC 92561329 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTC 225662 || ||| | |||||||| ||| ||| ||| || |||||||||| ||| Sbjct 92561328 TTTCTTATTCTGGATCTTGGCCTTTACATTTTCTATAGTGTCTGAGGGTTC 92561278 Score = 95.1 bits (104), Expect = 3e-14 Identities = 137/192 (71%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 225529 TGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGT 225588 |||| |||||||| | | || | ||||||||||||||||| || || ||||| || Sbjct 121405428 TGGATGTTGTAATCAGAGAGGGTGCAGCCATCTTCTAGCTGCTTTCCGGCAAAGATGAGC 121405369 Query 225589 CGTTGTTGGTCGGGCGGAATACC----TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTC 225644 | ||| ||||| || || || || ||| || || |||||| || |||||| || Sbjct 121405368 CTTTGCTGGTCAGGGGGGATGCCCTCTTTCTTTATCCTGGATC-TTGCCTTCACGTTCTC 121405310 Query 225645 GATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 ||||||||| || ||||| |||| ||||| |||||| |||| || || ||| Sbjct 121405309 GATGGTGTCACTGGGCTCCACATCTAGGGTGATGGTCTTGTTGGTCAGGGTCTTCTCGAA 121405250 Query 225705 CACTTGCATTTT 225716 | ||||||||| Sbjct 121405249 GATTTGCATTTT 121405238 >seq16 Length=151834684 Score = 84.2 bits (92), Expect = 5e-11 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || ||| ||| || |||| | ||||| | || |||| | ||| |||| | || Sbjct 29719486 CGCAGTTGCAGCACCAGGTACAAGGTGGAATGGTTCTGGATGTAGTAGTCGGAAAGGGTG 29719545 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || || | || || ||||| | || | || ||||| | || || ||| Sbjct 29719546 CGGCCATCCTCCAGTGGTTTGCCTGCGAATACCAGCCTCTGCTGGTCAAGTGGGATGCCT 29719605 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| ||| | ||||||||| || | || || || Sbjct 29719606 TCCTTGTCTTGGATCTTGACCTTGACATTCTTGATGGTGTCACTGGGCTGGACCTCAAAA 29719665 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||||||| |||| || || ||||| | ||||| || Sbjct 29719666 GTGATGGTCTTGCCTGTCAGGGTCTTCATGAAGATCTGCATGTT 29719709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528037183658