Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20musculus_20[refseq_20GCF_5F000001635.25_202016-06-29] 207 sequences; 2,807,715,301 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq30 379 3e-100 seq23 277 2e-69 seq9 268 1e-66 seq28 111 2e-19 seq29 102 1e-16 >seq30 Length=120421639 Score = 379 bits (420), Expect = 3e-100 Identities = 623/894 (70%), Gaps = 18/894 (2%) Strand=Plus/Minus Query 47837 CATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTC 47896 ||| ||| | | | | ||||| ||| || |||||||| || ||||| ||||| ||||| Sbjct 3353946 CATGACTGCAAATCTCTGATACTCAGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTC 3353887 Query 47897 CAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956 ||||| || || |||||||||||||| ||||| |||| | | |||| ||| ||||| Sbjct 3353886 TAATGAAATGTTCTCCATAAAATCAAAGGGATTTTCTGCCTGAAAAATCTTTGAGAATCC 3353827 Query 47957 TAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATT 48016 | |||| || | ||| || || || || || || || |||| ||| |||| || Sbjct 3353826 AAGTTCTACAAGTAATCTGTCAGCTACAAACTCAATGTACTGTTTCGTCAAAACACAGTT 3353767 Query 48017 CATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGC 48076 |||||| || || ||| || | || || || | |||||| || || || ||||| Sbjct 3353766 CATTCCAATGAGGCCAACAGGCAAGGCTTCTGTTAAAAACTCCTGCTCAATTTGAACAGC 3353707 Query 48077 ATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGT--TTAAAC 48134 ||| | || || || ||||||| || || ||| | |||| Sbjct 3353706 ATCAGCAATGAT-----------TTCCCTCACTCTGTCTTCTGAAGGCTTGTACTGAAAC 3353658 Query 48135 ATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAAT 48194 || | || ||||| ||||| |||||||||||||| || || || | ||| || ||||| Sbjct 3353657 ATCAGGCAGGCAAAGTCACAGTGAAGACCTTCATCCCTGCTGATCAGTTCATTTGAAAAA 3353598 Query 48195 GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAA 48254 || || || ||||| || || | || || ||||| |||||||| || || |||||||| Sbjct 3353597 GTCAGTCCAGGCATGAGGCCTCTCTTCTTTAGCCAGAATATTGCAGCAAATGATCCAGAG 3353538 Query 48255 AAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTT--CGT 48312 ||| | || ||||| || || ||||| || | ||| || || || | | || | Sbjct 3353537 AAGGAAATTCCTTCCACAGCAGCAAAGGCCACCACTCTTTCCCCAAAAGTAGATTTCCTA 3353478 Query 48313 TGTG-TATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATA 48371 | || |||||| || | ||| | || || || ||||| ||| | ||||||||||| || Sbjct 3353477 TCTGCTATCCAGCGCAGAGCCTAGTCTGCTTTTTTCTTAACATATGGCATTGTTTCAATT 3353418 Query 48372 GCATTAAAGAGAAAGttt-ttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACT 48430 || ||||| | ||| | ||||| ||| |||| | | |||||| ||||||| | ||| Sbjct 3353417 GCGTTAAATAAAAATTCCCTTTTCTTTGG-ATCTCTGATGTAAGTGTCTATTAGTAAACT 3353359 Query 48431 ATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTC 48490 ||||| || ||||||| ||| || || |||||||| || || || || | || Sbjct 3353358 GTACATCTCTGAGTGAACATTCTCGATGAGAATCTGAAAGCCATAGAAGCAGTGAGTCTC 3353299 Query 48491 TGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACT 48550 | | ||| |||||| || ||| || || |||| || |||||||| ||||||||||| Sbjct 3353298 CGGAACCTGGACCTCCTGACTAAAACGCTCCACCAAGTTTTCATTTACAATTCCATCACT 3353239 Query 48551 AGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATT 48610 || |||||||| ||||| | || |||||||| || |||| ||| | || || || Sbjct 3353238 GGCTGCAAAAAAGGCTAAGATGTGGGAGATAAAATACTTCTCGTCGGATTTAAGCTTGTT 3353179 Query 48611 CCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGC 48670 ||||| | || | ||||| | || || ||||| ||||||| || |||||| ||| Sbjct 3353178 CCAGTGAGGGAGGTTCTTTGACAAGTCAACCTCTTCTCCTGTCCAGAAAGATGCCCGTGC 3353119 Query 48671 TTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAATCT 48724 || |||||||| |||| |||||| || |||||||| || || ||||| || Sbjct 3353118 TTGCTTATACATTCTCCAGATATCAGGATACTGGATTGGAAAGATGACAAACCT 3353065 Score = 197 bits (218), Expect = 2e-45 Identities = 214/283 (76%), Gaps = 3/283 (1%) Strand=Plus/Minus Query 48126 TGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCG 48185 || || ||||| | || ||||| || || || | ||| || ||||| ||||| | || Sbjct 12680223 TGCTTGAACATCAGGCAGGCAAAGTCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCA 12680164 Query 48186 TTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAA 48245 || |||||||| || || ||||| ||||| ||||| |||||||| ||||||| || ||| Sbjct 12680163 TTGGAAAATGTAAGGCCCGGCATCAGTCCCCGTTTCTTGAGCCACAATATTGATGCAAAA 12680104 Query 48246 GATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTG 48305 || || |||||||| || ||||||||||| ||||| || || ||| ||||| || Sbjct 12680103 GAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGGCCACAACTCTTTCTCCATACGCA 12680044 Query 48306 GCTTCGTTGT---GTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATT 48362 || || |||| ||||| || ||||| |||||||||||||| ||||||||||| Sbjct 12680043 GCCTCTTTGTCCCCAATCCAGCGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATA 12679984 Query 48363 GTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTT 48405 ||||| |||||||| |||||| | | | |||| ||| ||||| Sbjct 12679983 GTTTCAATAGCATTGAAGAGATATTCTCTTTCCTTGGGATCTT 12679941 Score = 89.7 bits (98), Expect = 7e-13 Identities = 120/165 (73%), Gaps = 3/165 (2%) Strand=Plus/Plus Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGA--GACATAACTCCCATTTT 47851 ||| |||||| |||| || | |||| ||| ||| || | ||||| |||||||| | Sbjct 12679743 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTCGAAATCGACATGACTCCCATCCT 12679802 Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 ||||| || || || || ||||| || || || || || ||||| | ||| |||||||| Sbjct 12679803 CTGATACTCGCCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAGTGAGATATTTTC 12679862 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCC 47956 ||| || ||||| ||||| || | | |||| || ||||| || Sbjct 12679863 CATGAAGTCAAACGGATTTTCTACTCTGAAAATCTTGTTAAAACC 12679907 >seq23 Length=145441459 Score = 277 bits (306), Expect = 2e-69 Identities = 628/940 (67%), Gaps = 31/940 (3%) Strand=Plus/Plus Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA----GACATAACTCCCATTT 47850 ||| |||||| ||| || | |||| ||| ||| | || ||||| |||||||| Sbjct 104692298 TTAGAAGTCAGCATGCAAGGTAAAAGAATTCTCTG-TGGAATTCGACATGACTCCCATCC 104692356 Query 47851 TTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 47910 | ||||| || || || | ||||| || || | ||||| ||||| | ||| ||||||| Sbjct 104692357 TCTGATACTCGCCTACTTGCTTCTCAAAGAAGTCTGTTTTTCCTTCTAGTGAAATATTTT 104692416 Query 47911 CCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTC---TGAAA 47967 || | || ||||||||||| || | | |||| || |||| || | || || || Sbjct 104692417 CCGTGAAGTCAAATGGATTTTCTACTCTGAAAATCTTCTTAACACCCAGCTCCAGTGGAA 104692476 Query 47968 TCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAA 48027 | || || || | ||||| || || ||||||| ||||| || | | Sbjct 104692477 GC---CTGTCAGCCAAAAATTCAATGTACTGCTTCATCAAAGTGCAATTTGCCCCGAAGA 104692533 Query 48028 GTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCAC-TATT 48086 | || || || | ||||||| | |||||||| || | || | |||| | | || Sbjct 104692534 GCTTCACAGGCAAAGCCTCCATGAGAAACTCCTGCCCTATCCTAACAGTGTTGGTGTTTT 104692593 Query 48087 ATCGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATG 48144 || | |||| ||| ||| ||| || ||| || || || ||||| | || | Sbjct 104692594 ATATCTTTTACTCTTTGCTCCAATGGCTTGTGTAC--CAGGTGCTTGAACATCAGGCAGG 104692651 Query 48145 CAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGG 48204 || | || || || | ||| | ||||| ||||| | || || |||| ||| ||||| | Sbjct 104692652 CAGAGTCCCAGTGTAAACCCTTGTCTCTGCTAATAAGCTCATTGGAAAGTGTAAGACCCG 104692711 Query 48205 GCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGC 48264 |||| |||| || || |||||||| ||||| | || |||||| | | Sbjct 104692712 GCATCAGTCTGCGATTCTTGAGCCAGAATATCGATGC------------AAAGAAGACTC 104692759 Query 48265 CTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTA---TCC 48321 |||| || | ||||| || || || ||||| || || || |||| ||| Sbjct 104692760 CTTCCACCACAGCAAAGGCCACAACTCATTCTCCATATGGGGACTCTTTGTCCCCAGTCC 104692819 Query 48322 ACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 48381 | || ||||| |||||||||||||| |||||||||||||||| |||||||| |||| Sbjct 104692820 AACGCAAGGCCCAGTCAGCCTTCTTCTTCACACAAGGCATTGTTTAAATAGCATTGAAGA 104692879 Query 48382 GAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGG 48441 || | | | |||| ||| |||||||| |||||| || || | |||| |||||||| | Sbjct 104692880 GATATTCTCTTTCCTTGGAATCTTTAATGTAAGTGTCAATAAGGGGACTGTACATTTCAG 104692939 Query 48442 AGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTA 48501 |||| || ||||| || || || | || || || ||||| | || ||||| | || | Sbjct 104692940 AGTGTATGTTTTCCATGGCAATTTAGAAGCCATAGAAACAGCGGGCCTCTGTAACTTGAA 104692999 Query 48502 CCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAA 48561 | || | |||||| || |||| || ||||| ||||| |||||||| || |||| | Sbjct 104693000 CTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCTACAAAGA 104693059 Query 48562 ATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGA 48621 | || | || || ||||||||| | || | |||| | ||||| | | Sbjct 104693060 AAGCCAGAACGTGAGCTATAAAATATCTCTCATCCAGTTTCAGAGCTTCCCAGTGTTGAA 104693119 Query 48622 TATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACA 48681 || | || || | || || || | || |||||||| || ||||| ||||| || |||| Sbjct 104693120 TACCCTTGGAAAGGTCCACCTCCTTGGCAGTCCAAAAGGAGGCCTCAGCTTTCTTGTACA 104693179 Query 48682 TATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 | | ||| |||||| ||||| || || || | |||||| Sbjct 104693180 TCTGCCAGATATCATAGTATTCAATGGGAAAGACAACAAA 104693219 Score = 109 bits (120), Expect = 8e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 |||||||| || ||||| ||||| |||||||| || ||||||||||| || || | || Sbjct 102463780 TGAAATTCCCCTGACAAGACTCTTCGAGTGTAGATGTTACTGGTATAAGGCTCAATGGAC 102463721 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| || |||| ||| || ||||| |||||||| ||||| || || | | |||||| Sbjct 102463720 TCATTATTCCCCAGAATCTGGGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 102463661 Query 77247 TTTCTGAGACCAT 77259 || || | ||||| Sbjct 102463660 TTCCTTATACCAT 102463648 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| || ||||| || ||||||||||| ||| Sbjct 102451042 GTCCCAGCATTGAAGAGAGTAGGAGAGGCATGAGTGAACCACTTCTCAGAAAGTAGGTTG 102450983 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 || |||||||| || | || || || || ||||| || || | || | ||||||| Sbjct 102450982 TAGGTTTCAATTGCAGCATCAATATCTTCTTTGTGAATCCCCACAGAAACCCTCATCAAC 102450923 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 |||||||| ||||||||| || Sbjct 102450922 ATATGCTGTGGTCTTTCAGCC 102450902 Score = 102 bits (112), Expect = 1e-16 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| |||||||| ||||| || || |||||| || | || || || ||||| || | Sbjct 102467061 TCCAACCGTAGAAGTGCATACTAGTGAGTTTGCCGTAGTTGGGCTCAGCAATATGGATGT 102467002 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 | | ||||| || |||||||||||||| ||||| || || ||||| || | || |||| Sbjct 102467001 TTAAAGACTGGCTCTGATCGATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACAGTCT 102466942 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 | |||| |||||||| | || || | | ||| || | ||||| |||| Sbjct 102466941 TCTGAGAGATTTCCCACACGGTCTTATAGAGTTGCTTCAGGTCATCAGGAA 102466891 Score = 98.7 bits (108), Expect = 1e-15 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 77355 GATCCATTATATGTTTCATAAGGTCCTT-CTGTTTCAGCTAGTTCACAACTCGCTTCCAA 77413 ||||| | ||| |||||||| || || | || || ||||||||||| || ||||||| Sbjct 102460835 GATCCCTCATACGTTTCATAGGGGCCATACTCCTTG-GCTAGTTCACAGCTGGCTTCCAG 102460777 Query 77414 TGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATC 77473 ||||| || ||||| ||||| || |||| |||||| | || ||||| || || Sbjct 102460776 GGCTCCATAGTAAATGGTTTCAAAGATCTGCTTATTTAATAACTGGGCTTCTGGGCTCTC 102460717 Query 77474 AAACGGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 ||| || || | || || || ||||||||||| || || || ||||| ||||| || Sbjct 102460716 AAAGGGGTATCTCATCAGGATGAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGG 102460657 Query 77534 TCTATGTCTCTTATTGGA 77551 | ||| | ||||| || Sbjct 102460656 CCGATGGCGTTTATTTGA 102460639 >seq9 Length=156508116 Score = 268 bits (296), Expect = 1e-66 Identities = 625/929 (67%), Gaps = 24/929 (3%) Strand=Plus/Plus Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGAG---ACATAACTCCCATTTT 47851 |||||||||| || | || | ||| ||| | || | || |||| |||||||| Sbjct 73422145 TTAAAAGTCAGCACCCAAGGTAAACGAATTCT-TTGTGGAATTCACATGACTCCCATCCA 73422203 Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 ||||| ||||| || || ||||| || || || || || ||||| ||||| |||||||| Sbjct 73422204 CTGATACTCACCTACTCGCTTCTCAAAGAAGTTTGTCTTTCCTTCTAATGAAATATTTTC 73422263 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971 ||| || |||||||| || || | | |||| || ||||| || | || || || Sbjct 73422264 CATGAAGTCAAATGGGTTTCCTACTCTGAAAATCTTGTTAAAACCCAGCTCCAGCATAAG 73422323 Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031 |||| || || ||||| || || ||||||| || || || | || || | Sbjct 73422324 CCTATTGGCCACAAATTCAATGTACTGCTTCATCAAAGTGCAGTTTATCTCGATCAGCAT 73422383 Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGA 48091 || || | |||||| | || | | | || || || | | | | | ||||| Sbjct 73422384 CACAGGCAAGGCCTCCATGAGGATCCCCTGCTCTATCCTAAACTCGTTGGCGATTATTTC 73422443 Query 48092 TGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCAAAA 48149 | |||| | | || |||| || |||| || || || ||||| | | |||| Sbjct 73422444 TTTTACTCTCTGCTTCGTTGGCTTGTATAC--CAGGTGCTTGAACATCAGGTAGACAAAG 73422501 Query 48150 TCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATT 48209 || || || | ||| || ||||| ||||| | || || |||||||| || || |||| Sbjct 73422502 TCCCAGTGTAAACCCTCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCACC 73422561 Query 48210 AGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAA-GAATATGCCTTC 48268 ||||| |||| |||||||| ||||| | || ||||| |||||||| ||| || ||| Sbjct 73422562 AGTCCCTGTTTCTTGAGCCAGAATATCGGTGCAAAAGAACCAGAAAAAGAAGATTGGTTC 73422621 Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTA---TCCACCG 48325 ||| || ||||| || || || ||| | | | ||||| |||| |||| | Sbjct 73422622 TACCGCAGCAAAGGCCACAACTCGTTCTGCATGTGTAGCTTCTTTGTCCCCAGTCCAATG 73422681 Query 48326 TTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 48385 ||||| |||||||||| |||| ||||||||||| |||||||| || ||| | Sbjct 73422682 CAAGGCCCAGTCAGCCTTCT------CACA-GGCATTGTTTCAATAGCATTGAAAAGATA 73422734 Query 48386 GtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTG 48445 | |||||| ||| |||||||| |||||| || || | ||||| ||||||| ||||| Sbjct 73422735 TTCTTTTTCTTTGGGATCTTTAATGTAAGTGTCAATAAGGAGACTGTACATTTTAGAGTG 73422794 Query 48446 AATATTTTCAATTGCCA-TCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCT 48504 || ||| ||||| | || || || | |||||| | || ||||| | || || | Sbjct 73422795 TATGCCTTC-CCTGCCAGTTTGGAAGCCAT-AAAACAGCCAGCCTCTGTAACTTGAACTT 73422852 Query 48505 CCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATG 48564 | | |||||| || |||| || |||| | ||| |||||||| | |||| || | Sbjct 73422853 CTTGGCTAAATCGCTCCACCAAGTTTGCATTGAGTATGCCATCACTCCCTACAAAGAAAG 73422912 Query 48565 CTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATAT 48624 | | || || ||||||| | | || | || |||| | ||||| |||| | Sbjct 73422913 CCAGAACGTGAGCTATAAAATGTCTCTCATCGGGTTTCAGAGCTTCCCAGT-GCTGATCT 73422971 Query 48625 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATAT 48684 | || || | || || || ||||| |||||||| | ||||| ||||| || ||||| | Sbjct 73422972 CCTTGGAAAGGTCCACCTCCTCAGCAGTCCAAAAGGTGGCCTCAGCTTTCTTGTACATCT 73423031 Query 48685 TCCATATATCACTGTATTGGATTGGGAAA 48713 ||| |||||| ||| | || ||||||| Sbjct 73423032 GCCAGATATCATGGTACTAGA-TGGGAAA 73423059 >seq28 Length=122082543 Score = 111 bits (122), Expect = 2e-19 Identities = 279/420 (66%), Gaps = 12/420 (3%) Strand=Plus/Plus Query 180918 TTGGCTGATGAATTGTTCAACAGGGCATCACTTCAGTTAAATGAAACATTCAACTTTACT 180977 ||||||| || |||||| |||||| || | |||||| | ||||| ||| |||||| Sbjct 83069824 TTGGCTGCTGCATTGTTTAACAGGACAGAATTTCAGTACGAGGAAACTTTCCCCTTTACC 83069883 Query 180978 AGATCTGTCAATGTTAAAGTTACA--GCTAGTTCAGGTAAACAACTAAGAACACGTCTTA 181035 ||||| ||||| |||||||| ||| ||||| |||| || ||| ||| | | Sbjct 83069884 AGATCCAGATATGTTGAAGTTACATTGCT--TTCAGCGAAACGCCTGCGAAAACGCATCA 83069941 Query 181036 AGCAACAACTTCCTTCTACAGTAGCATCTTTTGCCAATACAGATGGTGGATATTTGTTCA 181095 | | | || ||| || || | ||||||| || || ||||| |||| |||||||| Sbjct 83069942 AAGAGCTCCTCCCTCAAACTGTTTCTGCTTTTGCAAACACGGATGGGGGATTTTTGTTCA 83070001 Query 181096 TTGGGTTGGATGGTAAGACGAATAAAGTAATTGGATTCAATGCTAGTCAAGA-ATACATT 181154 |||| |||||||| || || | || | ||||| || | || || |||| | | Sbjct 83070002 TTGGTTTGGATGGCAAAACCCAGCAAATTATTGGTTTTGAAGC-AGAGAAGAGCGATCTC 83070060 Query 181155 GATATGATAGGCTATGAGATAGAAAAGCGTATTAAAAGACTTCATGTAGTACACTTTTGT 181214 | | ||| ||| |||||||||| || || | ||| ||||| ||| Sbjct 83070061 GTGCTTCTAGAGAGTGAAATAGAAAAGCACATCCGGCAGCTGCCTGTCACTCACTTCTGT 83070120 Query 181215 GAGAAAAAAGAGGATATCAAGTACGCATGTAAATTCATAAAGGTATATAGACCAGATGAT 181274 ||| | || ||| | ||||||||| | || |||||||| | || | | | | | | | Sbjct 83070121 GAGGAGAAGGAGAAGATCAAGTACACGTGCAAATTCATCGAAGTGCACAAATCCGGAGCT 83070180 Query 181275 GAGAATACATCGACATATGTATGTGCTATCAAAGTGGAGAGATGTTGTTGTGCTGTGTTC 181334 | | | ||||||| ||||| ||| ||||||||||| || ||||| || ||| Sbjct 83070181 GTG------TGTGCATATGTGTGTGCGCTCAGAGTGGAGAGATTCTGCTGTGCAGTATTC 83070234 >seq29 Length=120129022 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 || ||||| ||||| | || || |||||||| || || ||||| || || ||||| ||| Sbjct 24711801 TCGTCTCTGCTAATAAGCTCATTGGAAAATGTAAGGCCCGGCATCAGCCCCCGTTTCTTG 24711742 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||| | || ||||| || |||||||| || ||||||||||| ||||| || Sbjct 24711741 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCTACGGCGGCAAAGGC 24711683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667002544480