Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20pahari_20[refseq_20GCF_5F900095145.1_202017-04-28] 2,581 sequences; 2,475,012,951 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 9e-16 >seq8 Length=167013402 Score = 98.7 bits (108), Expect = 9e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 127162 GGCTATTTAGGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATG 127221 || || || || |||||||| | || || ||||| ||||| ||||| | ||| || ||| Sbjct 105296526 GGTTACTTGGGTTGCCAAGCCTTATCAGAAATGATCCAGTTTTACCTGGTAGAAGTGATG 105296585 Query 127222 CCACAGGCAGAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAG 127281 || || ||||| || || || || || || || || || | ||||||||||| || ||| Sbjct 105296586 CCCCAAGCAGAGAAGCATGGCCCGGAAATCAAGGAGCATTTGAATTCCCTGGGAGAGAAG 105296645 Query 127282 CTGAAGACATTGAGACTTCGACTGCGTCGCTG 127313 |||||||| | || | || ||||| ||||| Sbjct 105296646 CTGAAGACCCTCAGGATGCGGCTGCGGCGCTG 105296677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430040872235672