Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mus_20pahari_20[refseq_20GCF_5F900095145.1_202017-04-28] 2,581 sequences; 2,475,012,951 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq854 170 1e-36 seq13 170 1e-36 seq2 168 4e-36 seq4 138 7e-27 seq26 116 2e-20 seq6 104 2e-16 seq22 102 5e-16 >seq854 Length=65724 Score = 170 bits (188), Expect = 1e-36 Identities = 351/517 (68%), Gaps = 7/517 (1%) Strand=Plus/Plus Query 475668 GAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAA 475727 ||||| | ||||| ||||| ||||| ||||||| ||||| | || || ||||| || | Sbjct 43004 GAGATGCCAAACTGGACAAGTCACAGATCCATGATATTGTCTTGGTGGGTGGTTCTACCA 43063 Query 475728 GAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAA 475786 |||| || || || ||||| | || | |||| ||||| ||| | | ||| | Sbjct 43064 GAATCCCCAAGATTC-AGAAACTTCTGCAAGACTTTTTCAATGGAAAAGAACTGAATAAG 43122 Query 475787 AGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCA 475846 || | || || ||||||||||||| ||||| || || ||||| ||||| ||| | || Sbjct 43123 AGCATTAACCCCAATGAAGCTGTTGCCTATGGTGCAGC-GTCCAGGCAGCCATTCTCTCT 43181 Query 475847 GGT--CAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCAT 475904 || |||| ||||| | | || | | || | || || ||||| ||||| Sbjct 43182 GGAGACAATTCT--GAGAATGTTCAGGATTTGCTGCTCTTGGATGTCACTCCTCTTTCCC 43239 Query 475905 TAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCC 475964 | ||| ||||||| | ||| || | ||||| || || | | ||||| | |||| Sbjct 43240 TTGGTATTGAAACTGCTGGTGGAGTCATGACNGTCCTCATCAAGCGCAATACCACCATCC 43299 Query 475965 CATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCC 476024 | ||| | || | || |||| || |||||||| || || |||| ||| | Sbjct 43300 CCACCAAGCAGACACAGACNTTCACCACCTACTCTGATAACCAGCCAGGTGTACTCATTC 43359 Query 476025 AAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATC 476084 | | | |||||||||||| | || || || || ||| ||||||| ||| | | Sbjct 43360 AGGTGTATGAAGGTGAAAGGGCCATGACCAAGGACAACAACCTGCTTGGAAAGTTTGAGC 43419 Query 476085 TTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTG 476144 | ||| || ||||| || ||| | || |||||||| ||||| ||||||||||| || | Sbjct 43420 TCACAGGCATACCTCCAGCACCCCGTGGGGTTCCTCAGATTGAGGTTACTTTTGACATNG 43479 Query 476145 ATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 |||| ||||| || || |||||| ||||| ||||| Sbjct 43480 ATGCCAATGGCATCCTCAATGTTTCTGCTGTAGATAA 43516 >seq13 Length=116904986 Score = 170 bits (188), Expect = 1e-36 Identities = 379/555 (68%), Gaps = 13/555 (2%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || | ||| ||||| | ||| | | ||| || Sbjct 35911777 TGCAGTTGGCATTGATCTTGGCACCATCTACTTCTGTGTGGGTGTCTTCTAGCATGAAAA 35911836 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||||||||||| ||||||||||| ||||| | || || || || | | |||| || Sbjct 35911837 GGTAGAAATAATAGCCAATGACCAGGGTAACTGTACCACGCCGAACTACGATGCTTTCAC 35911896 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTT-A 474506 ||| || ||||| | |||| ||||| || || || | | |||| || |||| | Sbjct 35911897 TGACACAGAACAATTATTTGGGGATGCAGCCAAGAATTAGGTTGCAATGAA-CCTGACCA 35911955 Query 474507 ATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAAT 474566 | || ||||||||| ||| | |||| | |||| |||||| || | | | || | Sbjct 35911956 ACACAGCTTTTGATGCCAAATGTCTGATCAGACGTAGGTTTGATAATGCTGTTTTTCAGT 35912015 Query 474567 CTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG 474626 ||||| || || |||||||||| |||| | |||| || || | || | | ||| Sbjct 35912016 CTGATTTGAAGCACTGGCCTTTTATGGTGGTGAATGATGCAGGCAGGCCTAAGGTCCAAG 35912075 Query 474627 C--AATACACGCAGGTGAAACTAAACAATTTTCAC-CGGAACAAATTTCTTCAATGGTTT 474683 |||||| ||| || || ||| | ||| || | || || | || || |||||| Sbjct 35912076 TTGAATACAA--AGGGGAGACAAAA-AGTTTCTACTCAGAGGAAGTGTCCTCCATGGTTC 35912132 Query 474684 TAGCCAAAATGAAACAAACCGCGAGCT-CATATCTTGGACAAGAA-GTAACTGATGCAGT 474741 | | | || ||| |||| | ||| | || ||| | |||| || || |||| || Sbjct 35912133 TGACACAGATAAAAGAAACTG-GAGAAGCTTACCTTAAA-AAGACTGTTACCAATGCTGT 35912190 Query 474742 AATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAG 474801 ||||| || ||||| || || ||||||||||| |||| ||||| |||||||| |||| Sbjct 35912191 GATTACAGTGCCAGCTTACTTCAATGATTCTCAGGGTCAGGCAAC-AAAGATGCTGGAAC 35912249 Query 474802 AATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 ||||| || ||||||| || | ||||| |||| |||||| || || || ||||||| Sbjct 35912250 TATTGCTGGCTTTAATGTATTTTGAATTATCAATGTACCAACTGCTGCTGCTATTGCTTA 35912309 Query 474862 TGGTCTTGATAAGAA 474876 || | ||||||| Sbjct 35912310 TGACTTAAATAAGAA 35912324 Score = 107 bits (118), Expect = 1e-17 Identities = 109/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 |||| || | || || ||||| || || ||||| ||||| || || ||||| ||||||| Sbjct 35906186 ATGCCGTGGTCACAGTGCCAGCTTACTTCAATGACTCTCAGCGACAGGCAACAAAAGATG 35906245 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | |||| |||||||| || ||||| | || || || ||||||||||| || || || Sbjct 35906246 CTGGAACTATTGCAGGCCTCAATGTACTTCGAATCATCAATGAACCAACTGCTGCTGCTA 35906305 Query 474855 TTGCTTATGGTCTTGATAAGAA 474876 |||||||||| | |||||||| Sbjct 35906306 TTGCTTATGGCTTGGATAAGAA 35906327 Score = 95.1 bits (104), Expect = 8e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091 |||||||||||| | || || || || ||| ||||||| ||| | || ||| Sbjct 35914131 TGAAGGTGAAAGGGCCATGACCAAGGACAACAACCTGCTTGGAAAGTTTGAGCTCACAGG 35914190 Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151 || ||||| || ||| | || |||||||| ||||| ||||||||||| || ||||| || Sbjct 35914191 CATACCTCCAGCACCCCGTGGGGTTCCTCAGATTGAGGTTACTTTTGACATCGATGCCAA 35914250 Query 476152 TGGTATTCTTAATGTTACTGCTTGTGATAA 476181 ||| || || |||||| ||||| ||||| Sbjct 35914251 TGGCATCCTCAATGTTTCTGCTGTAGATAA 35914280 >seq2 Length=163939365 Score = 168 bits (186), Expect = 4e-36 Identities = 371/552 (67%), Gaps = 5/552 (1%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||| | || |||| || Sbjct 91326559 TGCAGTTGGNATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCATGGAAA 91326500 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 || ||||| | |||||||||||| ||||| | || || || || ||| |||| || Sbjct 91326499 GGTGGAAATTAGTGCCAATGACCAGGGTAACTGCACCACGCCGAGCTACGTTGCTTTCAC 91326440 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || || || | | ||||| ||||| || || |||| | |||| || || || Sbjct 91326439 GGACACAGAGCGATTAATTGGGGATGCGGCCAAGAATCAGGTTGCAATGAACCCCACCAA 91326380 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| | |||| | |||| ||||||||| | | | || || Sbjct 91326379 CACAGTTTTTGATGCCAAATGTCTGATCAGGCGTAGGTTTGATGATGCTGTTNTTCAGTC 91326320 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627 ||||||| || ||||| || | |||| | |||| || || | || | | ||| Sbjct 91326319 TGATATGAAGCACTGGCCCTTCATGGTGGTGAATGATGCAGGCAGGCCCAAGGTCCAAGT 91326260 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 |||| | | || || ||| || | || || || | || || |||||| | | Sbjct 91326259 GGAACACAGATGGGAGACAAAAAGTTTCTACCCAGAGGAAGTGTCCTCCATGGTTCTGAC 91326200 Query 474688 CAAAATGAAACAAACCGCGAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTA 474746 || ||||| ||| || |||| || ||| |||| || || |||| |||| | Sbjct 91326199 AAAGATGAAGGAAATTGCAGAAGCATACCTCGGA-AAGACTGTTACCAATGCCGTAA-CA 91326142 Query 474747 CTGTTC--CAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAAT 474804 | | | |||| || || ||||| ||||| || || ||||| |||||||| |||| || Sbjct 91326141 CAATACCACAGCTTACTTCAATGACTCTCAGCGACAGGCAACAAAAGATGCTGGAACTAT 91326082 Query 474805 TGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 ||| || || ||||| | || || | |||||||||| || || || |||||||||| Sbjct 91326081 TGCGGGCCTCAATGTACTTCGAATCACCAATGAACCAATGGCTGCTGCTATTGCTTATGG 91326022 Query 474865 TCTTGATAAGAA 474876 | |||||||| Sbjct 91326021 CTTGGATAAGAA 91326010 Score = 156 bits (172), Expect = 3e-32 Identities = 415/628 (66%), Gaps = 5/628 (1%) Strand=Plus/Minus Query 475548 TTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAAT 475607 |||| |||||||||| | ||| |||||||| | |||| ||||| ||||| | | Sbjct 91325728 TTGAGATTGATTCTCTCTATGAGGGAATTGACTTCTATACCTCCATTACCCGGGCTCAGT 91325669 Query 475608 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCA 475667 |||| || | | |||| || || | ||| | || || || || | | || Sbjct 91325668 TTGAGGAATTGAATGCTGACCTGTTCCGTGGCACACTGGACCCTGTAGAGAAGGCCCTTC 91325609 Query 475668 GAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAA 475727 |||| | ||||| || || ||||| ||||||| | ||| | || || ||||| ||| Sbjct 91325608 AAGATGCCAAACTGGATAAGTCACAGATCCATGATACTGTCTTGGTGGGTGGTTCTACA- 91325550 Query 475728 GAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAA 475786 |||| || || || ||||| | || | | || ||||| ||| | | ||| | Sbjct 91325549 GAATCCCCAAGATTC-AGAAACTTCTGCAAGACTTCTTCAATGGAAAAGAACTGAATAAG 91325491 Query 475787 AGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCA 475846 || | || || |||||||||||||| ||||| || |||||||| ||||| ||| | || Sbjct 91325490 AGCATTAACCCCGATGAAGCTGTTGCCTATGGTGCAGCTGTCCAGGCAGCCATTCTCTCT 91325431 Query 475847 GGTCAATCAGAC-GAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATT 475905 || | || | | ||| | || | | || | || || ||||| ||||| | Sbjct 91325430 GGAGACA-AGTCTGGGAATGGTCAGGATTTGCTGCTCTTGGATGTCACTCCTCTTTCCCT 91325372 Query 475906 AGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCC 475965 ||| || |||| | ||| || | ||||| || || | | ||| | | ||||| Sbjct 91325371 TGGTATTNAAACTGCTGGTGGAGTCATGACGGTCCTCATCAAGTGCAATGCCACCATCCC 91325312 Query 475966 ATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCA 476025 ||| | || | || |||| || |||||||| || || |||| ||| || Sbjct 91325311 CACCAAGCAGACACAGACTTTCACCACCTACTCTGATAACCAGCCAGGTGTACTCATTCA 91325252 Query 476026 AATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCT 476085 || | ||||||| |||| | || ||||| || ||| ||||||| ||| | || Sbjct 91325251 GATGTATGAAGGTAAAAGGGCCATGACCAAAGACAACAACCTGCTTGGAAAGTTTGAGCT 91325192 Query 476086 TGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGA 476145 ||| || ||||| || || | || |||| ||| ||||| ||||||||||| || || Sbjct 91325191 CACAGGCATACCTCCAGCATCCCGTGGGGTTCTTCATATTGAGGTTACTTTTGACATCGA 91325132 Query 476146 TGCAAATGGTATTCTTAATGTTACTGCT 476173 ||| ||||| || || |||||| ||||| Sbjct 91325131 TGCCAATGGCATCCTCAATGTTTCTGCT 91325104 Score = 98.7 bits (108), Expect = 6e-15 Identities = 105/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091 ||||||||||||| | ||||||||||| ||| ||| | || || | ||| ||| Sbjct 52797452 TGAAGGTGAAAGATCCATGACTAAAGATAACAACCTACTGGAAAAGTTAGAACTTACAGG 52797393 Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151 | | ||||| || ||| | | |||||||| |||||||| |||||||| ||||||||||| Sbjct 52797392 TGTACCTCCAGCACCCTGTGCTGTTCCTCAGATTGAAGTCACTTTTGACATTGATGCAAA 52797333 Query 476152 TGGTATTCTTAATGTTACT 476170 | | || || | || |||| Sbjct 52797332 TAGCATCCTCAGTGATACT 52797314 >seq4 Length=164141553 Score = 138 bits (152), Expect = 7e-27 Identities = 422/641 (66%), Gaps = 10/641 (2%) Strand=Plus/Minus Query 475548 TTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAAT 475607 |||| || ||||||| | ||| |||| ||| | |||| ||| | ||||||||| Sbjct 24375057 TTGAGATTTATTCTCTCTATGAGGGAACTGAATTCTATACCTCCATTTCCTGGGCTAAAT 24374998 Query 475608 TTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTC--T 475665 ||||||| | | |||| | || | ||| | ||||| | | ||| || | Sbjct 24374997 TTGAAGAACTGAATGCTGACATGTTCTGTGGCACACTC-AACCCTGTAATGAAGGTCCTT 24374939 Query 475666 CAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAAC 475725 || |||| | ||||| ||||| ||||| ||||| | ||||| | || || ||||| || Sbjct 24374938 CA-AGATGCCAAACTAGACAAGTCACAGATCCATTATATTGTCTTGGTGGGTGGTTCTAC 24374880 Query 475726 AAGAAT-TCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATG 475784 ||||| || || | | ||| || | || | | || ||||||||| | | ||| Sbjct 24374879 CAGAATCTCTAAGACTCAGA-AATTTCTGCAAGACTTCTTCAATGGTAAAGAACTGAATA 24374821 Query 475785 AAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 | || | || ||||||||||||||||| ||||| | |||||||| |||| ||||||| Sbjct 24374820 AGAGCATTAACCCTGATGAAGCTGTTGCTTATGGTGTAGCTGTCCAGGCAGTCATTTTAT 24374761 Query 475845 CAGGTCAATCAGAC-GAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCA 475903 |||| | || | ||||| | | | | || | || || ||||| |||| Sbjct 24374760 CAGG-AGACAAGTCTGAGAATGTTCAGGGTTCGCTGCTCTTGGATGTCACTCCTCTTTTC 24374702 Query 475904 TTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATC 475963 | ||| ||||||| | ||| | | | |||||| || || | ||||| | || Sbjct 24374701 CTTGGTATTGAAACTGCTGGTGAG-TCATGACTGTCCTCATCAAGCACAATACCACCATT 24374643 Query 475964 CCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATC 476023 | ||| || | || |||| || ||||| ||| | || |||| ||| Sbjct 24374642 CTTACCAAGTGGACACAGACTTTCACCACCTAGTCTGACAATAAGCCAGGTGTACTCATT 24374583 Query 476024 CAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAAT 476083 | | | |||||||||||| | | ||||| | || ||| ||||||| ||| | Sbjct 24374582 TAGGTGTATGAAGGTGAAAGGACTATGACTAAGAACAACAACCTGCTTGGAAAGTTTGAG 24374523 Query 476084 CTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATT 476143 || ||| || ||||| || | | | |||||||| ||||| ||||||||||| ||| Sbjct 24374522 CTCACAGGCATACCTCCAGCACTCCATGTGGTTCCTCAGATTGAGGTTACTTTTGACATT 24374463 Query 476144 GATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 ||||| |||| || || ||| || ||||| ||||||| Sbjct 24374462 GATGCCAATGCCATCCTCAAT-TTTCTGCTGTAAATAAATC 24374423 Score = 136 bits (150), Expect = 3e-26 Identities = 366/552 (66%), Gaps = 21/552 (4%) Strand=Plus/Minus Query 474334 TGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGA 474393 ||| |||||| | || || || | | ||||| | ||| | || |||| || || || Sbjct 24375854 TGGCATTGATCTTGGCACCACCTGCTCCTGTGTGGGTGTCTTCCAGCATGGAAAGGTGGA 24375795 Query 474394 AATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAAC 474453 ||||||||||| |||||| ||||| | || || | |||| | |||| ||||| || Sbjct 24375794 AATAATTGCCAGTGACCAGGGTAACTGCACCCCAGAGTGCTATGCTGCTTTCACTGACAC 24375735 Query 474454 TGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTAT 474513 ||||| | ||||| || || |||||| |||| || | | || || | Sbjct 24375734 AGAACAATTAATTGG----GC----AAGAATCAAGTTGCAATGAACCTCATGAACACAGT 24375683 Query 474514 TTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATAT 474573 ||||||||| ||| | |||| | | || ||||||||| | ||| || |||||||| Sbjct 24375682 TTTTGATGCCAAATGTCTGATCAGACATAGGTTTGATGATGCTGTTGTTCAGTCTGATAT 24375623 Query 474574 GCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG--CAATA 474631 | || ||| | || | |||| | |||| || || | || | | ||| | | Sbjct 24375622 GAAGCACTGGTCCTTCATGGTGCTGAATGATGCAGGCAGGCCCAAGGTCCAAGTTGAGTG 24375563 Query 474632 CACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAA 474691 || ||| || || ||| || | || || || | || ||||||||| | | || Sbjct 24375562 CA--AAGGGGAGACAAAAGTTTTCTAACTAGAGGAAGTGTCCTCAATGGTTCTGACAAAG 24375505 Query 474692 ATGAAACAAACCGC--GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTACT 474748 ||||| ||| || |||| || |||||| |||| || | |||| || | || Sbjct 24375504 ATGAAGGAAATTGCAGAAGCT--TACCTTGGA-AAGACTGTGAACAATGCTGTGGTCACA 24375448 Query 474749 GTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCA 474808 || ||||| ||||||||||| ||||| | || ||||| |||||||| ||| |||| Sbjct 24375447 GTGCCAGCCTATTTTAATGACTCTCAGAGCCAGGCAACAAAAGATGCTAGAACTGTTGCT 24375388 Query 474809 GGTCTTAATGTTTTACGTATTATTAATGAACCAA---CAGCAGCCGCACTTGCTTATGGT 474865 || || |||| | | ||||| |||||||||| | || || || |||||||||| Sbjct 24375387 GGCCTCAATGAACTTCAAATTATCAATGAACCAACTGCTGCTGCTGCTATTGCTTATGGC 24375328 Query 474866 CTTGATAAGAAT 474877 | || | |||| Sbjct 24375327 TTAGAAAGGAAT 24375316 Score = 95.1 bits (104), Expect = 8e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 476035 AGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTAT 476094 ||||||| || | || ||||| ||| | || ||||| ||| |||| || || Sbjct 22067849 AGGTGAACGACCCCTAACAAAAGACAATCATCTTCTGGGAACATTTGATCTGACTGGAAT 22067908 Query 476095 TCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGG 476154 ||||||||||||| | |||||||| ||||||||||| || ||||| || |||| ||||| Sbjct 22067909 TCCTCCTGCTCCCCGCGGAGTTCCCCAAATTGAAGTCACCTTTGAGATAGATGTTAATGG 22067968 Query 476155 TATTCTT 476161 ||||||| Sbjct 22067969 TATTCTT 22067975 Score = 93.3 bits (102), Expect = 3e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCA 480623 ||||||||||| ||| || || | || || || | | ||| | | |||||| Sbjct 18056561 ACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGACAAAGTACGGCCATCTTCC 18056620 Query 480624 AGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGA 480683 || ||||| |||||||| || | | || ||||||||||||||||||||||| || || Sbjct 18056621 AGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 18056680 Query 480684 ATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 ||||| || ||| ||| ||||| || | | || | || || || || ||||| Sbjct 18056681 ATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTT 18056740 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| || ||||| || Sbjct 18056741 CCCGTAAGGGTCTTCACAAAAATCTG 18056766 Score = 93.3 bits (102), Expect = 3e-13 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCA 480623 ||||||||||| ||| || || | || || || | | ||| | | |||||| Sbjct 99334574 ACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGACAAAGTACGGCCATCTTCC 99334633 Query 480624 AGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGA 480683 || ||||| |||||||| || | | || ||||||||||||||||||||||| || || Sbjct 99334634 AGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGG 99334693 Query 480684 ATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 ||||| || ||| ||| ||||| || | | || | || || || || ||||| Sbjct 99334694 ATCTTGGCCTTTACATTTTCTATAGTGTCCGAGGGTTCAACCTCGAGCGTGATGGTTTTT 99334753 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| || ||||| || Sbjct 99334754 CCCGTAAGGGTCTTCACAAAAATCTG 99334779 >seq26 Length=50160631 Score = 116 bits (128), Expect = 2e-20 Identities = 357/548 (65%), Gaps = 27/548 (5%) Strand=Plus/Plus Query 475640 ACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCAT 475699 ||| | || || || || | || || ||||| ||||||| ||||| ||||| || ||| Sbjct 6910112 ACACTGGACCCTGTAGAGAAGGTCCTTTGAGATGCTAAACTAGACAAGTCACAGGTTCAT 6910171 Query 475700 GAAATTGTTCTTGTAGGA-GGTTCAACAAGAATTCCAAAAATAAGAGAAA-TGCTTTCAT 475757 || ||||| |||| ||| ||||| || ||||| || || || ||||| | || | | Sbjct 6910172 GATATTGT-CTTGGTGGATGGTTCTACCAGAATCCCCAAGATTC-AGAAACTTCTGTGAG 6910229 Query 475758 CATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATG 475817 | || ||||| ||| | | ||| | || | || |||||||||||| |||| ||| Sbjct 6910230 ACTTCTTCAATGGAAAAGAATCGAATAAGAGCATTAACCCTGATGAAGCTATTGCCTATA 6910289 Query 475818 GAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACG----AGAAACTAAATAAT 475873 | || ||||| || ||||| ||| |||| | ||||| |||| | | || Sbjct 6910290 GTGCAGCTGTGCAGGCAGCCATTCTATCTAG------AGACGTCTAAGAATGTTCAGGAT 6910343 Query 475874 ATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATG 475933 | | || | || || ||||| ||||| | ||| ||||||| | | | || | ||| Sbjct 6910344 TTGCTGCTCTTGGATGTCACTCCTCTTTCCCTTGGTATTGAAACTGCTAGTGGAGTCATG 6910403 Query 475934 ACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACT 475993 || || || | | ||||| | || | | | || || | ||| Sbjct 6910404 ACGGTCCTCATCAAGTGCAATACCACCAT----TCCCACCAAGCAGA---------CACA 6910450 Query 475994 TATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACT 476053 ||| | || | || || |||| ||| || | | |||||||||||| | || Sbjct 6910451 GATTTTCATCACCAGCCATATGTACTCATTCAGGTATATGAAGGTGAAAGGGCCATGACC 6910510 Query 476054 AAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGA 476113 || || || ||| || ||| ||| | || ||| || |||| || || | || Sbjct 6910511 AAGGACAACAACCTGCTCAGAAAGTTTGAGCTCACAGGCATACCTCTAGCACCTTGTGGG 6910570 Query 476114 GTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 |||||||| ||||| ||||||||||| ||| || | ||||| || || |||||| ||||| Sbjct 6910571 GTTCCTCAGATTGAGGTTACTTTTGACATTCATACCAATGGCATCCTCAATGTTTCTGCT 6910630 Query 476174 TGTGATAA 476181 ||||| Sbjct 6910631 GTAGATAA 6910638 >seq6 Length=146485248 Score = 104 bits (114), Expect = 2e-16 Identities = 192/282 (68%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATG 474383 || ||||| |||| |||||| | || || || ||| ||||| | ||| | || ||| Sbjct 36023872 GACTTGCAGTTGGCATTGATCTTGGCACCACCTACCCCTGTGTGGGTGTCTTCCAGCATG 36023813 Query 474384 GTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTT 474443 | || || ||||||||||||||||| || |||| | || ||||| |||||| ||| Sbjct 36023812 GAAAGGTGGAAATAATTGCCAATGATCAGGGTATCCGCACCACACCGAGCTATGTTGCTT 36023753 Query 474444 TTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTG 474503 | | | | || || || | ||||| ||||| || || |||| | ||| ||||| Sbjct 36023752 TCAGTAACACAGAGCAATTAATTGGGGATGCAGCCAAGAATCAGGTAGCAATGAATCCCA 36023693 Query 474504 TTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCC 474563 || || ||||||||||| ||| ||| || || ||||||||| ||| | Sbjct 36023692 ACAACACAATTTTTGATGCCAAACATCTGACCGGGAATAGATTTGATGATGTTGTTGTTC 36023633 Query 474564 AATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTG 474605 | |||||| || || |||| || | |||| | |||| || Sbjct 36023632 AGTCTGATGTGAAGCAGGGGCCCTTCATGGTGGTGAATGATG 36023591 >seq22 Length=59539374 Score = 102 bits (112), Expect = 5e-16 Identities = 227/333 (68%), Gaps = 6/333 (2%) Strand=Plus/Plus Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGT-TCT 475665 |||||||| | ||| | || || |||||| ||| |||| || || ||| |||| ||| Sbjct 2901766 TTTGAAGAGCTGTGTGCAGACCTATTTAGAGGCACACTTGAGCCTGTGGAA-AAGTCTCT 2901824 Query 475666 CAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAAC 475725 | ||| | || | ||||| | || ||||||| |||||||| ||||| || || || Sbjct 2901825 TCGGGATGCCAAGATGGACAAGGCTAAAATCCATGACATTGTTCTAGTAGGGGGCTCTAC 2901884 Query 475726 AAGAATTCCAAAAATAAGAGAAATGCTTTCATCA-TATTTTAATGGTAAAAAGTTAAATG 475784 | || ||||| | | || ||||| || | || |||||||| | | || Sbjct 2901885 CCGCATCCCAAAGGTGCAAAAACTGCTT-CAGGACTACTTTAATGGACGGGATCTCAACA 2901943 Query 475785 AAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 | ||| | ||||| ||||| || || || || |||||||| ||||| |||||||||||| Sbjct 2901944 AGAGTATCAATCCCGATGAGGCGGTCGCCTACGGAGCTGCCGTCCAGGCAGCTATTTTAA 2902003 Query 475845 CAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTT-GACGTAACTCCACTTTCA 475903 || | | || ||| || | || ||| ||||| |||||| |||| || || Sbjct 2902004 TGGGCGACAAATCTGAAAAAGTACAGGAT-TTGCTTTTGTTGGACGTAGCTCCCCTGTCT 2902062 Query 475904 TTAGGTCTTGAAACAGTTGGAGGGATTATGACT 475936 |||| | || |||| ||| || | |||||| Sbjct 2902063 CTAGGATTGGAGACAGCTGGGGGTGTGATGACT 2902095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268068488386988